RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W YKL070WP36087 169 aa1.79□□□□□ -2.12
BRO1YPL084W HIS2P38635 335 aa1.79□□□□□ -2.12
BRO1YPL084W MEP1P40260 492 aa1.79□□□□□ -2.12
BRO1YPL084W SWC4P53201 476 aa1.79□□□□□ -2.12
BRO1YPL084W YOR292CQ08743 309 aa1.79□□□□□ -2.12
BRO1YPL084W YDL012CQ12489 107 aa1.79□□□□□ -2.12
BRO1YPL084W TDH3P00359 332 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
BRO1YPL084W ZIP1P31111 875 aa1.79□□□□□ -2.12
BRO1YPL084W VPS45P38932 577 aa1.79□□□□□ -2.12
BRO1YPL084W RRG9P40156 214 aa1.79□□□□□ -2.12
BRO1YPL084W GTO1P48239 356 aa1.79□□□□□ -2.12
BRO1YPL084W MND1P53102 219 aa1.79□□□□□ -2.12
BRO1YPL084W YNL260CP53846 198 aa1.79□□□□□ -2.12
BRO1YPL084W YNL050CP53952 270 aa1.79□□□□□ -2.12
BRO1YPL084W ECM19Q06011 112 aa1.79□□□□□ -2.12
BRO1YPL084W ASR1Q06834 288 aa1.79□□□□□ -2.12
BRO1YPL084W LAG2Q92325 660 aa1.79□□□□□ -2.12
BRO1YPL084W NTE1Q04958 1679 aa1.79□□□□□ -2.12
BRO1YPL084W COX10P21592 462 aa1.78□□□□□ -2.12
BRO1YPL084W ICL1P28240 557 aaPredicted RBP1.78□□□□□ -2.12
BRO1YPL084W RTT105P40063 208 aa1.78□□□□□ -2.12
BRO1YPL084W UFE1P41834 346 aa1.78□□□□□ -2.12
BRO1YPL084W GDS1P41913 522 aa1.78□□□□□ -2.12
BRO1YPL084W KEL2P50090 882 aa1.78□□□□□ -2.12
BRO1YPL084W UBC13P52490 153 aa1.78□□□□□ -2.12
BRO1YPL084W YPL077CQ02831 240 aa1.78□□□□□ -2.12
BRO1YPL084W GMC1Q04399 608 aa1.78□□□□□ -2.12
BRO1YPL084W MRX8Q05473 314 aa1.78□□□□□ -2.12
BRO1YPL084W YLR446WQ06204 433 aa1.78□□□□□ -2.12
BRO1YPL084W YDL211CQ12121 372 aa1.78□□□□□ -2.12
BRO1YPL084W RRP42Q12277 265 aaPredicted RBP1.78□□□□□ -2.12
BRO1YPL084W TFC7Q12415 435 aa1.78□□□□□ -2.12
BRO1YPL084W CDC25P04821 1589 aa1.78□□□□□ -2.12
BRO1YPL084W TY1B-DR4Q07793 1604 aa1.78□□□□□ -2.12
BRO1YPL084W OM45P16547 393 aa1.78□□□□□ -2.12
BRO1YPL084W YBR062CP38239 180 aa1.78□□□□□ -2.12
BRO1YPL084W TDA11P38854 504 aa1.78□□□□□ -2.12
BRO1YPL084W AGP3P43548 558 aa1.78□□□□□ -2.12
BRO1YPL084W RNY1Q02933 434 aaKnown RBP1.78□□□□□ -2.12
BRO1YPL084W BCP1Q06338 283 aa1.78□□□□□ -2.12
BRO1YPL084W TAZ1Q06510 381 aa1.78□□□□□ -2.12
BRO1YPL084W FAB1P34756 2278 aa1.77□□□□□ -2.13
BRO1YPL084W FUS3P16892 353 aaKnown RBP1.77□□□□□ -2.13
BRO1YPL084W IMP3P32899 183 aaPredicted RBP1.77□□□□□ -2.13
BRO1YPL084W GPX1P36014 167 aa1.77□□□□□ -2.13
BRO1YPL084W EBP2P36049 427 aaKnown RBP1.77□□□□□ -2.13
BRO1YPL084W YIL054WP40524 105 aa1.77□□□□□ -2.13
BRO1YPL084W VTI1Q04338 217 aa1.77□□□□□ -2.13
BRO1YPL084W SEC13Q04491 297 aaKnown RBP1.77□□□□□ -2.13
BRO1YPL084W VIK1Q12045 647 aa1.77□□□□□ -2.13
BRO1YPL084W POM33Q12164 279 aa1.77□□□□□ -2.13
BRO1YPL084W YPR064WQ12492 139 aa1.77□□□□□ -2.13
BRO1YPL084W DFM1Q12743 341 aaKnown RBP1.77□□□□□ -2.13
BRO1YPL084W MMS1Q06211 1407 aa1.77□□□□□ -2.13
BRO1YPL084W TCB3Q03640 1545 aaKnown RBP1.77□□□□□ -2.13
BRO1YPL084W ATP6P00854 259 aa1.77□□□□□ -2.13
BRO1YPL084W HPR1P17629 752 aaKnown RBP1.77□□□□□ -2.13
BRO1YPL084W RPB9P27999 122 aa1.77□□□□□ -2.13
BRO1YPL084W SKG6P32900 734 aaPredicted RBP1.77□□□□□ -2.13
BRO1YPL084W RPC37P36121 282 aa1.77□□□□□ -2.13
BRO1YPL084W PEX18P38855 283 aa1.77□□□□□ -2.13
BRO1YPL084W BDH1P39714 382 aa1.77□□□□□ -2.13
BRO1YPL084W FRT2P39734 528 aa1.77□□□□□ -2.13
BRO1YPL084W YGL118CP53132 145 aa1.77□□□□□ -2.13
BRO1YPL084W GPN3Q06543 272 aa1.77□□□□□ -2.13
BRO1YPL084W BER1Q06688 274 aaKnown RBP1.77□□□□□ -2.13
BRO1YPL084W YPL278CQ08990 100 aa1.77□□□□□ -2.13
BRO1YPL084W FMP16Q12497 93 aa1.77□□□□□ -2.13
BRO1YPL084W RPO31P04051 1460 aa1.76□□□□□ -2.13
BRO1YPL084W CKA2P19454 339 aa1.76□□□□□ -2.13
BRO1YPL084W IFM1P25038 676 aa1.76□□□□□ -2.13
BRO1YPL084W CDC13P32797 924 aaKnown RBP1.76□□□□□ -2.13
BRO1YPL084W FRM2P37261 193 aa1.76□□□□□ -2.13
BRO1YPL084W DED81P38707 554 aaKnown RBP1.76□□□□□ -2.13
BRO1YPL084W SHQ1P40486 507 aaPredicted RBP1.76□□□□□ -2.13
BRO1YPL084W MIC19P43594 170 aa1.76□□□□□ -2.13
BRO1YPL084W HST4P53688 370 aa1.76□□□□□ -2.13
BRO1YPL084W PEX30Q06169 523 aa1.76□□□□□ -2.13
BRO1YPL084W TRM10Q12400 293 aa1.76□□□□□ -2.13
BRO1YPL084W PRP46Q12417 451 aaPredicted RBP1.76□□□□□ -2.13
BRO1YPL084W ILV1P00927 576 aaKnown RBP1.76□□□□□ -2.13
BRO1YPL084W SSA3P09435 649 aaKnown RBP1.76□□□□□ -2.13
BRO1YPL084W TFS1P14306 219 aa1.76□□□□□ -2.13
BRO1YPL084W MRPL6P32904 214 aa1.76□□□□□ -2.13
BRO1YPL084W TPO5P36029 618 aa1.76□□□□□ -2.13
BRO1YPL084W VAB2P40003 282 aa1.76□□□□□ -2.13
BRO1YPL084W CAX4P53223 239 aa1.76□□□□□ -2.13
BRO1YPL084W TDH1P00360 332 aaKnown RBP1.75□□□□□ -2.13
BRO1YPL084W FRS2P15625 503 aaKnown RBP1.75□□□□□ -2.13
BRO1YPL084W CPT1P17898 393 aa1.75□□□□□ -2.13
BRO1YPL084W YSR3P23501 404 aa1.75□□□□□ -2.13
BRO1YPL084W SPT4P32914 102 aaPredicted RBP1.75□□□□□ -2.13
BRO1YPL084W RIB7P33312 244 aa1.75□□□□□ -2.13
BRO1YPL084W YIA6P40556 373 aa1.75□□□□□ -2.13
BRO1YPL084W FMP33P46998 180 aa1.75□□□□□ -2.13
BRO1YPL084W DNF2Q12675 1612 aa1.75□□□□□ -2.13
BRO1YPL084W MRPL37P36532 105 aa1.75□□□□□ -2.13
BRO1YPL084W TRR2P38816 342 aa1.75□□□□□ -2.13
BRO1YPL084W ASG7P46993 209 aa1.75□□□□□ -2.13
BRO1YPL084W MPP10P47083 593 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms