RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	YLR179C	Q06252	201 aa	Known RBP	1.39	□□□□□ -2.19
SSK2	YNR031C	YDL086W	Q07505	273 aa		1.39	□□□□□ -2.19
SSK2	YNR031C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	1.39	□□□□□ -2.19	not detected
SSK2	YNR031C	SNU23	Q12368	194 aa	Predicted RBP	1.39	□□□□□ -2.19
SSK2	YNR031C	RPL11B	Q3E757	174 aa	Predicted RBP	1.39	□□□□□ -2.19
SSK2	YNR031C	MRP13	P12686	339 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	YAK1	P14680	807 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	GCN3	P14741	305 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	TAL1	P15019	335 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	DPB2	P24482	689 aa	Predicted RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	CHA1	P25379	360 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	ARE1	P25628	610 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	PHA2	P32452	334 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	SIP1	P32578	815 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	YPK3	P38070	525 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	CDS1	P38221	457 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	FES1	P38260	290 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	EXO5	P38289	585 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	BIT2	P38346	545 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	RPS20	P38701	121 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	MUP3	P38734	546 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	SOP4	P39543	234 aa	Predicted RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	ERG28	P40030	148 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	SHO1	P40073	367 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	PUG1	P40100	303 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	PRM5	P40476	318 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	SER33	P40510	469 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	YJL163C	P46996	555 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	PHO23	P50947	330 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	VOA1	P53262	265 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	CUS2	P53830	285 aa	Predicted RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	GPI15	P53961	229 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	LGE1	Q02796	332 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	YMR279C	Q03263	540 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	YMR160W	Q03823	816 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	SEN15	Q04675	128 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	PLB3	Q08108	686 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	THP1	Q08231	455 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	DCI1	Q08558	271 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	RDR1	Q08904	546 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	RSA1	Q08932	381 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	AIM41	Q12032	185 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	YPR014C	Q6B0W2	109 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	CDC8	P00572	216 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	ADE4	P04046	510 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	FUM1	P08417	488 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	ERD2	P18414	219 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	SCL1	P21243	252 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	CCA1	P21269	546 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	YSP3	P25036	478 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	MSS1	P32559	526 aa	Predicted RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	SUA5	P32579	426 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	CDC13	P32797	924 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	1.38	□□□□□ -2.19	not detected
SSK2	YNR031C	SRB2	P34162	210 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	RCN1	P36054	211 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	TAE1	P38340	232 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	CYC2	P38909	366 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	YEL057C	P39983	233 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	YIL165C	P40446	119 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	COS4	P43542	379 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	LSM1	P47017	172 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	YHC3	P47040	408 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	MRH4	P53166	561 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	PNC1	P53184	216 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	IMO32	P53219	342 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	YGR168C	P53293	376 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	AAH1	P53909	347 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	NRK1	P53915	240 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	YNL040W	P53960	456 aa	Predicted RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	CRZ1	P53968	678 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	ACT1	P60010	375 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	RSC9	Q03124	581 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	OST6	Q03723	332 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	BCP1	Q06338	283 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	OSW1	Q08692	278 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	YDL211C	Q12121	372 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	USB1	Q12208	290 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	MRPL23	Q12487	163 aa	Predicted RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	CDC7	P06243	507 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	TPK2	P06245	380 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	HTS1	P07263	546 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	PPR1	P07272	904 aa	Predicted RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	ZWF1	P11412	505 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	CKA1	P15790	372 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	RNR1	P21524	888 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	MRS4	P23500	304 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	LAC1	P28496	418 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	PRO1	P32264	428 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	SPS19	P32573	292 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	IMP3	P32899	183 aa	Predicted RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	YKL070W	P36087	169 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	CBP4	P37267	147 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	MTC4	P38335	694 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	WSS1	P38838	269 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	FAD1	P38913	306 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	PLB1	P39105	664 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	TIF34	P40217	347 aa	Known RBP	1.38	□□□□□ -2.19
SSK2	YNR031C	SWM2	P40342	146 aa		1.38	□□□□□ -2.19
SSK2	YNR031C	GAT1	P43574	510 aa		1.38	□□□□□ -2.19

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms