RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W SOG2Q08817 791 aa7.4□□□□□ -1.22
YPT11YNL304W THP3Q12049 470 aaKnown RBP7.4□□□□□ -1.22
YPT11YNL304W BAG7Q12128 409 aa7.4□□□□□ -1.22
YPT11YNL304W ACF2Q12168 779 aa7.4□□□□□ -1.22
YPT11YNL304W TOR1P35169 2470 aa7.4□□□□□ -1.23
YPT11YNL304W RPL7AP05737 244 aaKnown RBP7.39□□□□□ -1.23
YPT11YNL304W CYT1P07143 309 aa7.39□□□□□ -1.23
YPT11YNL304W SPO7P18410 259 aa7.39□□□□□ -1.23
YPT11YNL304W UTR1P21373 530 aa7.39□□□□□ -1.23
YPT11YNL304W SCO1P23833 295 aa7.39□□□□□ -1.23
YPT11YNL304W GIT1P25346 518 aa7.39□□□□□ -1.23
YPT11YNL304W STS1P38637 319 aa7.39□□□□□ -1.23
YPT11YNL304W PCL6P40038 420 aa7.39□□□□□ -1.23
YPT11YNL304W NAS2P40555 220 aa7.39□□□□□ -1.23
YPT11YNL304W PBP1P53297 722 aaKnown RBP7.39□□□□□ -1.23
YPT11YNL304W PAU12P53343 120 aa7.39□□□□□ -1.23
YPT11YNL304W APM1Q00776 475 aaPredicted RBP7.39□□□□□ -1.23
YPT11YNL304W RVB1Q03940 463 aaKnown RBP7.39□□□□□ -1.23
YPT11YNL304W RRP9Q06506 573 aaKnown RBP7.39□□□□□ -1.23
YPT11YNL304W NIP7Q08962 181 aaKnown RBP7.39□□□□□ -1.23
YPT11YNL304W YDL176WQ12027 708 aa7.39□□□□□ -1.23
YPT11YNL304W RPL7BQ12213 244 aaKnown RBP7.39□□□□□ -1.23
YPT11YNL304W TY1A-NL1Q12391 440 aaKnown RBP7.39□□□□□ -1.23
YPT11YNL304W DCP1Q12517 231 aaPredicted RBP7.39□□□□□ -1.23
YPT11YNL304W YEL009C-AA0A023PZF2 135 aa7.38□□□□□ -1.23
YPT11YNL304W EXG1P23776 448 aaKnown RBP7.38□□□□□ -1.23
YPT11YNL304W PUT3P25502 979 aaPredicted RBP7.38□□□□□ -1.23
YPT11YNL304W KRR1P25586 316 aaPredicted RBP7.38□□□□□ -1.23
YPT11YNL304W VPS17P32913 551 aa7.38□□□□□ -1.23
YPT11YNL304W SRP102P36057 244 aaPredicted RBP7.38□□□□□ -1.23
YPT11YNL304W GPX2P38143 162 aa7.38□□□□□ -1.23
YPT11YNL304W MOH1P38191 138 aa7.38□□□□□ -1.23
YPT11YNL304W MNN5P46982 586 aa7.38□□□□□ -1.23
YPT11YNL304W TDA1Q03533 586 aa7.38□□□□□ -1.23
YPT11YNL304W BNA7Q04066 261 aa7.38□□□□□ -1.23
YPT11YNL304W VBA4Q04602 768 aaKnown RBP7.38□□□□□ -1.23
YPT11YNL304W ERF2Q06551 359 aa7.38□□□□□ -1.23
YPT11YNL304W LUC7Q07508 261 aaPredicted RBP7.38□□□□□ -1.23
YPT11YNL304W FRE5Q08908 694 aa7.38□□□□□ -1.23
YPT11YNL304W MED2Q12124 431 aa7.38□□□□□ -1.23
YPT11YNL304W MSL5Q12186 476 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
YPT11YNL304W YRM1Q12340 786 aa7.38□□□□□ -1.23
YPT11YNL304W Q0144Q9ZZW2 109 aa7.38□□□□□ -1.23
YPT11YNL304W CPR2P23285 205 aa7.37□□□□□ -1.23
YPT11YNL304W RPC34P32910 317 aa7.37□□□□□ -1.23
YPT11YNL304W PDR3P33200 976 aa7.37□□□□□ -1.23
YPT11YNL304W SHE2P36068 246 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
YPT11YNL304W THI2P38141 450 aa7.37□□□□□ -1.23
YPT11YNL304W PAU24P38155 120 aa7.37□□□□□ -1.23
YPT11YNL304W GDS1P41913 522 aa7.37□□□□□ -1.23
YPT11YNL304W PPT1P53043 513 aa7.37□□□□□ -1.23
YPT11YNL304W SAY1P53324 424 aa7.37□□□□□ -1.23
YPT11YNL304W BSC5P53755 489 aa7.37□□□□□ -1.23
YPT11YNL304W ATG4P53867 494 aa7.37□□□□□ -1.23
YPT11YNL304W MRX8Q05473 314 aa7.37□□□□□ -1.23
YPT11YNL304W RBS1Q05672 457 aaKnown RBP7.37□□□□□ -1.23
YPT11YNL304W NNT1Q05874 261 aa7.37□□□□□ -1.23
YPT11YNL304W FRE6Q12473 712 aa7.37□□□□□ -1.23
YPT11YNL304W SUS1Q6WNK7 96 aa7.37□□□□□ -1.23
YPT11YNL304W SIR2P06700 562 aa7.36□□□□□ -1.23
YPT11YNL304W HMG1P12683 1054 aa7.36□□□□□ -1.23
YPT11YNL304W STE12P13574 688 aa7.36□□□□□ -1.23
YPT11YNL304W PRE7P23724 241 aaKnown RBP7.36□□□□□ -1.23
YPT11YNL304W BOS1P25385 244 aa7.36□□□□□ -1.23
YPT11YNL304W CAM1P29547 415 aaKnown RBP7.36□□□□□ -1.23
YPT11YNL304W MCM10P32354 571 aa7.36□□□□□ -1.23
YPT11YNL304W NPL6P32832 435 aa7.36□□□□□ -1.23
YPT11YNL304W SPT10P35208 640 aa7.36□□□□□ -1.23
YPT11YNL304W ANR2P36090 516 aaPredicted RBP7.36□□□□□ -1.23
YPT11YNL304W RPS26AP39938 119 aaKnown RBP7.36□□□□□ -1.23
YPT11YNL304W RPS26BP39939 119 aaKnown RBP7.36□□□□□ -1.23
YPT11YNL304W RFC4P40339 323 aaKnown RBP7.36□□□□□ -1.23
YPT11YNL304W ATG18P43601 500 aa7.36□□□□□ -1.23
YPT11YNL304W BPL1P48445 690 aaPredicted RBP7.36□□□□□ -1.23
YPT11YNL304W MKC7P53379 596 aa7.36□□□□□ -1.23
YPT11YNL304W CPR8P53728 308 aa7.36□□□□□ -1.23
YPT11YNL304W CTS2Q06350 511 aa7.36□□□□□ -1.23
YPT11YNL304W TSR2Q06672 205 aaKnown RBP7.36□□□□□ -1.23
YPT11YNL304W MIM1Q08176 113 aa7.36□□□□□ -1.23
YPT11YNL304W SYC1Q08553 188 aaPredicted RBP7.36□□□□□ -1.23
YPT11YNL304W NOP56Q12460 504 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
YPT11YNL304W YLR099W-AQ3E798 87 aa7.36□□□□□ -1.23
YPT11YNL304W YBL113CQ7M4S9 792 aa7.36□□□□□ -1.23
YPT11YNL304W RPN13O13563 156 aa7.35□□□□□ -1.23
YPT11YNL304W RPS13P05756 151 aaKnown RBP7.35□□□□□ -1.23
YPT11YNL304W MRP1P10662 321 aaKnown RBP7.35□□□□□ -1.23
YPT11YNL304W MDH2P22133 377 aa7.35□□□□□ -1.23
YPT11YNL304W RPA135P22138 1203 aaKnown RBP7.35□□□□□ -1.23
YPT11YNL304W PPA2P28239 310 aa7.35□□□□□ -1.23
YPT11YNL304W SBA1P28707 216 aaKnown RBP7.35□□□□□ -1.23
YPT11YNL304W ATS1P31386 333 aa7.35□□□□□ -1.23
YPT11YNL304W THI4P32318 326 aa7.35□□□□□ -1.23
YPT11YNL304W DOA4P32571 926 aa7.35□□□□□ -1.23
YPT11YNL304W MTH1P35198 433 aa7.35□□□□□ -1.23
YPT11YNL304W COS9P36034 407 aa7.35□□□□□ -1.23
YPT11YNL304W SLZ1P40167 298 aa7.35□□□□□ -1.23
YPT11YNL304W YJL218WP40892 196 aaKnown RBP7.35□□□□□ -1.23
YPT11YNL304W PHB1P40961 287 aa7.35□□□□□ -1.23
YPT11YNL304W CCC1P47818 322 aa7.35□□□□□ -1.23
YPT11YNL304W PMT5P52867 743 aa7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms