RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	FLO1	P32768	1537 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	MRP20	P32387	263 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	UGA4	P32837	571 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	REC104	P33323	182 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
SEC39	YLR440C	PET10	P36139	283 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	EXO5	P38289	585 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	SRP68	P38687	599 aa	Known RBP	4.65	□□□□□ -1.67
SEC39	YLR440C	IPI1	P38803	334 aa	Predicted RBP	4.65	□□□□□ -1.67
SEC39	YLR440C	HAT2	P39984	401 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	BST1	P43571	1029 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	YJR124C	P47159	448 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	YPL068C	Q02749	293 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	ATG21	Q02887	496 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	DIG1	Q03063	452 aa	Known RBP	4.65	□□□□□ -1.67
SEC39	YLR440C	PLB2	Q03674	706 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	CCE1	Q03702	353 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	YPR1	Q12458	312 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	TRM11	Q12463	433 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	YPT6	Q99260	215 aa		4.65	□□□□□ -1.67
SEC39	YLR440C	YDR157W	A0A023PZE8	133 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	MCK1	P21965	375 aa	Known RBP	4.64	□□□□□ -1.67
SEC39	YLR440C	MRPL9	P31334	269 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	LDS1	P31379	325 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	STE14	P32584	239 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	YEF1	P32622	495 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	BCK2	P33306	851 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	SCD5	P34758	872 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	YNK1	P36010	153 aa	Known RBP	4.64	□□□□□ -1.67
SEC39	YLR440C	YKL075C	P36083	450 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	ARP1	P38696	384 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	SMB1	P40018	196 aa	Known RBP	4.64	□□□□□ -1.67
SEC39	YLR440C	COA1	P40452	197 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	GTS1	P40956	396 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	GLC8	P41818	229 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	HXT15	P54854	567 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	GIP3	Q03016	1276 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	IZH1	Q03419	316 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	TMA23	Q03525	211 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	BNA5	Q05979	453 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	MRI1	Q06489	411 aa	Known RBP	4.64	□□□□□ -1.67
SEC39	YLR440C	YLR302C	O13544	120 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	RPN13	O13563	156 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	CYC3	P06182	269 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	RPL31A	P0C2H8	113 aa	Known RBP	4.64	□□□□□ -1.67
SEC39	YLR440C	RPL31B	P0C2H9	113 aa	Known RBP	4.64	□□□□□ -1.67
SEC39	YLR440C	CPT1	P17898	393 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	SAM2	P19358	384 aa	Known RBP	4.64	□□□□□ -1.67
SEC39	YLR440C	URK1	P27515	501 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	CAT2	P32796	670 aa	Known RBP	4.64	□□□□□ -1.67
SEC39	YLR440C	FLO10	P36170	1169 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	MMS21	P38632	267 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	HIS2	P38635	335 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	YJL107C	P42947	387 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	ERJ5	P43613	295 aa	Predicted RBP	4.64	□□□□□ -1.67
SEC39	YLR440C	CIN2	P46670	268 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	AVT4	P50944	713 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	JAC1	P53193	184 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	ARK1	P53974	638 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	MRPL51	Q06090	140 aa	Predicted RBP	4.64	□□□□□ -1.67
SEC39	YLR440C	NKP2	Q06162	153 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	TMA10	Q06177	86 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	IZH3	Q07959	543 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	BUD20	Q08004	166 aa	Predicted RBP	4.64	□□□□□ -1.67
SEC39	YLR440C	YLL056C	Q12177	298 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	PST2	Q12335	198 aa	Known RBP	4.64	□□□□□ -1.67
SEC39	YLR440C	RDI1	Q12434	202 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	PRM4	Q12498	284 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	RMD5	Q12508	421 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	YGL194C-A	Q2V2P6	80 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	YJR112W-A	Q3E743	109 aa		4.64	□□□□□ -1.67
SEC39	YLR440C	SAL1	D6W196	494 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	SOD2	P00447	233 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	REP2	P03872	296 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	YFR010W-A	P0C5N0	62 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SEC39	YLR440C	DAL82	P21705	255 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SEC39	YLR440C	SUT1	P53032	299 aa	Known RBP	4.63	□□□□□ -1.67
SEC39	YLR440C	PEX31	P53203	462 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	STD1	Q02794	444 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	YMR160W	Q03823	816 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	YMR130W	Q04223	302 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	AGE1	Q04412	482 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	HRD3	Q05787	833 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	EST2	Q06163	884 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	ATP14	Q12349	124 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	TRM10	Q12400	293 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	RPS21B	Q3E754	87 aa	Known RBP	4.63	□□□□□ -1.67
SEC39	YLR440C	YLR099W-A	Q3E798	87 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	ECM3	Q99252	613 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	RIB3	Q99258	208 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	UBA3	Q99344	299 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	CPR1	P14832	162 aa	Known RBP	4.63	□□□□□ -1.67
SEC39	YLR440C	MAG1	P22134	296 aa	Known RBP	4.63	□□□□□ -1.67
SEC39	YLR440C	SEC22	P22214	214 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	PCL1	P24867	279 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	PPZ1	P26570	692 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	MSK1	P32048	576 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	SEC17	P32602	292 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms