RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W YNL040WP53960 456 aaPredicted RBP2.31□□□□□ -2.04
SMD2YLR275W SAM4Q08985 325 aaKnown RBP2.31□□□□□ -2.04
SMD2YLR275W YPR1Q12458 312 aa2.31□□□□□ -2.04
SMD2YLR275W FET3P38993 636 aa2.3□□□□□ -2.04
SMD2YLR275W MNN9P39107 395 aaKnown RBP2.3□□□□□ -2.04
SMD2YLR275W INA22P40576 216 aa2.3□□□□□ -2.04
SMD2YLR275W YPL080CQ02826 108 aa2.3□□□□□ -2.04
SMD2YLR275W IRC4Q03036 179 aa2.3□□□□□ -2.04
SMD2YLR275W UBX2Q04228 584 aa2.3□□□□□ -2.04
SMD2YLR275W PAA1Q12447 191 aaKnown RBP2.3□□□□□ -2.04
SMD2YLR275W TDH2P00358 332 aaKnown RBP2.29□□□□□ -2.04
SMD2YLR275W TDH3P00359 332 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SMD2YLR275W ERD1P16151 362 aa2.29□□□□□ -2.04
SMD2YLR275W ZRT1P32804 376 aa2.29□□□□□ -2.04
SMD2YLR275W YKL162CP36052 402 aa2.29□□□□□ -2.04
SMD2YLR275W RIB4P50861 169 aaPredicted RBP2.29□□□□□ -2.04
SMD2YLR275W DBP6P53734 629 aaKnown RBP2.29□□□□□ -2.04
SMD2YLR275W MIX17Q03667 156 aa2.29□□□□□ -2.04
SMD2YLR275W CUR1Q06469 252 aa2.29□□□□□ -2.04
SMD2YLR275W VIK1Q12045 647 aa2.29□□□□□ -2.04
SMD2YLR275W MRX4Q12467 430 aa2.29□□□□□ -2.04
SMD2YLR275W CAR2P07991 424 aaKnown RBP2.28□□□□□ -2.04
SMD2YLR275W MSS116P15424 664 aaKnown RBP2.28□□□□□ -2.04
SMD2YLR275W KRE1P17260 313 aa2.28□□□□□ -2.04
SMD2YLR275W CDC42P19073 191 aa2.28□□□□□ -2.04
SMD2YLR275W SAR1P20606 190 aaKnown RBP2.28□□□□□ -2.04
SMD2YLR275W YKR032WP36127 104 aa2.28□□□□□ -2.04
SMD2YLR275W VOA1P53262 265 aa2.28□□□□□ -2.04
SMD2YLR275W CLP1Q08685 445 aaPredicted RBP2.28□□□□□ -2.04
SMD2YLR275W YHR035WP38769 630 aa2.27□□□□□ -2.05
SMD2YLR275W SOP4P39543 234 aaPredicted RBP2.27□□□□□ -2.05
SMD2YLR275W LOH1P47055 219 aa2.27□□□□□ -2.05
SMD2YLR275W UFD1P53044 361 aa2.27□□□□□ -2.05
SMD2YLR275W OKP1P53298 406 aa2.27□□□□□ -2.05
SMD2YLR275W SNX41Q04053 625 aa2.27□□□□□ -2.05
SMD2YLR275W YMR111CQ04461 462 aaPredicted RBP2.27□□□□□ -2.05
SMD2YLR275W SEC13Q04491 297 aaKnown RBP2.27□□□□□ -2.05
SMD2YLR275W PBP4Q07362 185 aaKnown RBP2.27□□□□□ -2.05
SMD2YLR275W YOR292CQ08743 309 aa2.27□□□□□ -2.05
SMD2YLR275W DCP1Q12517 231 aaPredicted RBP2.27□□□□□ -2.05
SMD2YLR275W PRE7P23724 241 aaKnown RBP2.26□□□□□ -2.05
SMD2YLR275W RSA4P25382 515 aaKnown RBP2.26□□□□□ -2.05
SMD2YLR275W VPH2P32341 215 aa2.26□□□□□ -2.05
SMD2YLR275W AIM29P36154 155 aa2.26□□□□□ -2.05
SMD2YLR275W YFL040WP43562 540 aa2.26□□□□□ -2.05
SMD2YLR275W YGR266WP53326 701 aa2.26□□□□□ -2.05
SMD2YLR275W ARP5P53946 755 aa2.26□□□□□ -2.05
SMD2YLR275W RRG8Q06109 277 aa2.26□□□□□ -2.05
SMD2YLR275W VAC14Q06708 880 aa2.26□□□□□ -2.05
SMD2YLR275W FEX1Q08913 375 aa2.26□□□□□ -2.05
SMD2YLR275W FEX2Q08991 375 aa2.26□□□□□ -2.05
SMD2YLR275W PFK27Q12471 397 aaPredicted RBP2.26□□□□□ -2.05
SMD2YLR275W RAD7P06779 565 aa2.25□□□□□ -2.05
SMD2YLR275W RPL5P26321 297 aaKnown RBP2.25□□□□□ -2.05
SMD2YLR275W YER084WP40057 128 aa2.25□□□□□ -2.05
SMD2YLR275W CDC40P40968 455 aaPredicted RBP2.25□□□□□ -2.05
SMD2YLR275W COX16P47081 118 aa2.25□□□□□ -2.05
SMD2YLR275W UTP23Q12339 254 aaKnown RBP2.25□□□□□ -2.05
SMD2YLR275W IZH4Q99393 312 aa2.25□□□□□ -2.05
SMD2YLR275W YOL163WP0CF20 169 aa2.24□□□□□ -2.05
SMD2YLR275W YAK1P14680 807 aa2.24□□□□□ -2.05
SMD2YLR275W MRPL6P32904 214 aa2.24□□□□□ -2.05
SMD2YLR275W RPC25P35718 212 aa2.24□□□□□ -2.05
SMD2YLR275W GPX1P36014 167 aa2.24□□□□□ -2.05
SMD2YLR275W MRPL40P36534 297 aa2.24□□□□□ -2.05
SMD2YLR275W PCL7P40186 285 aa2.24□□□□□ -2.05
SMD2YLR275W LOC1P43586 204 aaPredicted RBP2.24□□□□□ -2.05
SMD2YLR275W RGM1Q00453 211 aa2.24□□□□□ -2.05
SMD2YLR275W ARC18Q05933 178 aaKnown RBP2.24□□□□□ -2.05
SMD2YLR275W PEX30Q06169 523 aa2.24□□□□□ -2.05
SMD2YLR275W SIA1Q12212 622 aa2.24□□□□□ -2.05
SMD2YLR275W LAG2Q92325 660 aa2.24□□□□□ -2.05
SMD2YLR275W DAL80P26343 269 aa2.23□□□□□ -2.05
SMD2YLR275W RPL16BP26785 198 aaKnown RBP2.23□□□□□ -2.05
SMD2YLR275W MCH2P36032 473 aa2.23□□□□□ -2.05
SMD2YLR275W SWD2P36104 329 aaPredicted RBP2.23□□□□□ -2.05
SMD2YLR275W YHL044WP38727 235 aa2.23□□□□□ -2.05
SMD2YLR275W RRF1P38771 230 aa2.23□□□□□ -2.05
SMD2YLR275W PNC1P53184 216 aaKnown RBP2.23□□□□□ -2.05
SMD2YLR275W SWC4P53201 476 aa2.23□□□□□ -2.05
SMD2YLR275W BIO4P53630 237 aa2.23□□□□□ -2.05
SMD2YLR275W CDD1Q06549 142 aa2.23□□□□□ -2.05
SMD2YLR275W APC9Q12107 265 aa2.23□□□□□ -2.05
SMD2YLR275W YIL002W-AQ3E7Z5 69 aa2.23□□□□□ -2.05
SMD2YLR275W UGA1P17649 471 aa2.22□□□□□ -2.05
SMD2YLR275W YPC1P38298 316 aa2.22□□□□□ -2.05
SMD2YLR275W LIF1P53150 421 aa2.22□□□□□ -2.05
SMD2YLR275W SPO19Q03029 223 aa2.22□□□□□ -2.05
SMD2YLR275W YLR446WQ06204 433 aa2.22□□□□□ -2.05
SMD2YLR275W RRP42Q12277 265 aaPredicted RBP2.22□□□□□ -2.05
SMD2YLR275W YAL063C-AQ3E791 96 aa2.22□□□□□ -2.05
SMD2YLR275W GAL7P08431 366 aa2.21□□□□□ -2.06
SMD2YLR275W RPL31AP0C2H8 113 aaKnown RBP2.21□□□□□ -2.06
SMD2YLR275W DBP3P20447 523 aaKnown RBP2.21□□□□□ -2.06
SMD2YLR275W VPS1P21576 704 aaKnown RBP2.21□□□□□ -2.06
SMD2YLR275W GPI12P23797 304 aa2.21□□□□□ -2.06
SMD2YLR275W CSM1P25651 190 aa2.21□□□□□ -2.06
SMD2YLR275W ATG12P38316 186 aa2.21□□□□□ -2.06
SMD2YLR275W YFL064CP43540 174 aa2.21□□□□□ -2.06
SMD2YLR275W KEL2P50090 882 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms