RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C MEP3P53390 489 aa3.15□□□□□ -1.91
VPS53YJL029C MRPL51Q06090 140 aaPredicted RBP3.15□□□□□ -1.91
VPS53YJL029C TGS1Q12052 315 aa3.15□□□□□ -1.91
VPS53YJL029C FBA1P14540 359 aaKnown RBP3.14□□□□□ -1.91
VPS53YJL029C REC107P21651 314 aa3.14□□□□□ -1.91
VPS53YJL029C URE2P23202 354 aaKnown RBP3.14□□□□□ -1.91
VPS53YJL029C PRP28P23394 588 aa3.14□□□□□ -1.91
VPS53YJL029C STE50P25344 346 aa3.14□□□□□ -1.91
VPS53YJL029C MCM10P32354 571 aa3.14□□□□□ -1.91
VPS53YJL029C SAC1P32368 623 aaKnown RBP3.14□□□□□ -1.91
VPS53YJL029C RPN2P32565 945 aaKnown RBP3.14□□□□□ -1.91
VPS53YJL029C ISC1P40015 477 aaKnown RBP3.14□□□□□ -1.91
VPS53YJL029C PRE6P40303 254 aaKnown RBP3.14□□□□□ -1.91
VPS53YJL029C YFL054CP43549 646 aa3.14□□□□□ -1.91
VPS53YJL029C IRC5P43610 853 aa3.14□□□□□ -1.91
VPS53YJL029C MAL12P53341 584 aa3.14□□□□□ -1.91
VPS53YJL029C YNL181WP53878 407 aa3.14□□□□□ -1.91
VPS53YJL029C COG5P53951 403 aa3.14□□□□□ -1.91
VPS53YJL029C KAP120Q02932 1032 aa3.14□□□□□ -1.91
VPS53YJL029C DML1Q03652 475 aa3.14□□□□□ -1.91
VPS53YJL029C ACF2Q12168 779 aa3.14□□□□□ -1.91
VPS53YJL029C TMA7Q3E764 64 aaKnown RBP3.14□□□□□ -1.91
VPS53YJL029C MDL1P33310 695 aa3.14□□□□□ -1.91
VPS53YJL029C SPC34P36131 295 aa3.14□□□□□ -1.91
VPS53YJL029C FET3P38993 636 aa3.14□□□□□ -1.91
VPS53YJL029C CAF16P43569 289 aa3.14□□□□□ -1.91
VPS53YJL029C YJR096WP47137 282 aa3.14□□□□□ -1.91
VPS53YJL029C YGR045CP53229 120 aa3.14□□□□□ -1.91
VPS53YJL029C DAM1P53267 343 aa3.14□□□□□ -1.91
VPS53YJL029C UIP4Q08926 304 aa3.14□□□□□ -1.91
VPS53YJL029C RSA1Q08932 381 aa3.14□□□□□ -1.91
VPS53YJL029C ALG6Q12001 544 aaKnown RBP3.14□□□□□ -1.91
VPS53YJL029C NCE102Q12207 173 aaRIP-Chip data3.14□□□□□ -1.91not detected
VPS53YJL029C NFI1Q12216 726 aa3.14□□□□□ -1.91
VPS53YJL029C CTA1P15202 515 aa3.13□□□□□ -1.91
VPS53YJL029C ERS1P17261 260 aa3.13□□□□□ -1.91
VPS53YJL029C RHB1P25378 209 aa3.13□□□□□ -1.91
VPS53YJL029C DPH5P32469 300 aaPredicted RBP3.13□□□□□ -1.91
VPS53YJL029C CYS4P32582 507 aaKnown RBP3.13□□□□□ -1.91
VPS53YJL029C SOF1P33750 489 aaKnown RBP3.13□□□□□ -1.91
VPS53YJL029C RSM22P36056 628 aa3.13□□□□□ -1.91
VPS53YJL029C VBA2P38358 474 aaKnown RBP3.13□□□□□ -1.91
VPS53YJL029C ARN2P38724 620 aa3.13□□□□□ -1.91
VPS53YJL029C CTF8P38877 133 aa3.13□□□□□ -1.91
VPS53YJL029C YNL208WP40159 199 aaKnown RBP3.13□□□□□ -1.91
VPS53YJL029C NIT2P47016 307 aa3.13□□□□□ -1.91
VPS53YJL029C YDR387CQ04162 555 aa3.13□□□□□ -1.91
VPS53YJL029C COQ11Q05892 277 aa3.13□□□□□ -1.91
VPS53YJL029C BTS1Q12051 335 aa3.13□□□□□ -1.91
VPS53YJL029C RTC5Q12108 567 aaKnown RBP3.13□□□□□ -1.91
VPS53YJL029C TAF3Q12297 353 aa3.13□□□□□ -1.91
VPS53YJL029C FOL3Q12676 427 aaPredicted RBP3.13□□□□□ -1.91
VPS53YJL029C SNF6P18888 332 aa3.13□□□□□ -1.91
VPS53YJL029C EXG1P23776 448 aaKnown RBP3.13□□□□□ -1.91
VPS53YJL029C BUD5P25300 642 aaPredicted RBP3.13□□□□□ -1.91
VPS53YJL029C PRE2P30656 287 aaKnown RBP3.13□□□□□ -1.91
VPS53YJL029C GDH2P33327 1092 aaKnown RBP3.13□□□□□ -1.91
VPS53YJL029C PAD1P33751 242 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
VPS53YJL029C MRPS5P33759 307 aa3.13□□□□□ -1.91
VPS53YJL029C RIX1P38883 763 aaPredicted RBP3.13□□□□□ -1.91
VPS53YJL029C KRE29P40026 464 aa3.13□□□□□ -1.91
VPS53YJL029C SLZ1P40167 298 aa3.13□□□□□ -1.91
VPS53YJL029C HIS6P40545 261 aa3.13□□□□□ -1.91
VPS53YJL029C CAK1P43568 368 aaPredicted RBP3.13□□□□□ -1.91
VPS53YJL029C YNR062CP53748 327 aa3.13□□□□□ -1.91
VPS53YJL029C ASI1P54074 624 aa3.13□□□□□ -1.91
VPS53YJL029C RCE1Q03530 315 aa3.13□□□□□ -1.91
VPS53YJL029C YDR391CQ04170 232 aa3.13□□□□□ -1.91
VPS53YJL029C YLR040CQ07988 224 aa3.13□□□□□ -1.91
VPS53YJL029C SKI7Q08491 747 aaPredicted RBP3.13□□□□□ -1.91
VPS53YJL029C YOR289WQ12012 251 aaPredicted RBP3.13□□□□□ -1.91
VPS53YJL029C YRM1Q12340 786 aa3.13□□□□□ -1.91
VPS53YJL029C RRI1Q12468 440 aa3.13□□□□□ -1.91
VPS53YJL029C SEC12P11655 471 aa3.12□□□□□ -1.91
VPS53YJL029C PHO80P20052 293 aa3.12□□□□□ -1.91
VPS53YJL029C FAR1P21268 830 aa3.12□□□□□ -1.91
VPS53YJL029C ITR1P30605 584 aa3.12□□□□□ -1.91
VPS53YJL029C NTG1P31378 399 aa3.12□□□□□ -1.91
VPS53YJL029C DAL3P32459 195 aa3.12□□□□□ -1.91
VPS53YJL029C YME2P32843 850 aa3.12□□□□□ -1.91
VPS53YJL029C GDT1P38301 280 aaPredicted RBP3.12□□□□□ -1.91
VPS53YJL029C YAR028WP39548 234 aa3.12□□□□□ -1.91
VPS53YJL029C GPP2P40106 250 aaKnown RBP3.12□□□□□ -1.91
VPS53YJL029C STB1P42845 420 aa3.12□□□□□ -1.91
VPS53YJL029C RPS0BP46654 252 aaKnown RBP3.12□□□□□ -1.91
VPS53YJL029C NIT3P49954 291 aa3.12□□□□□ -1.91
VPS53YJL029C COS10P52924 374 aa3.12□□□□□ -1.91
VPS53YJL029C PRM8P53174 237 aa3.12□□□□□ -1.91
VPS53YJL029C ELA1P53861 379 aaPredicted RBP3.12□□□□□ -1.91
VPS53YJL029C YAP6Q03935 383 aa3.12□□□□□ -1.91
VPS53YJL029C ENV7Q12003 364 aa3.12□□□□□ -1.91
VPS53YJL029C YHR214C-EQ8TGK0 99 aa3.12□□□□□ -1.91
VPS53YJL029C SCEIP03882 235 aa3.12□□□□□ -1.91
VPS53YJL029C GAL1P04385 528 aa3.12□□□□□ -1.91
VPS53YJL029C MSW1P04803 379 aa3.12□□□□□ -1.91
VPS53YJL029C RPB8P20436 146 aa3.12□□□□□ -1.91
VPS53YJL029C YCR100CP25606 316 aa3.12□□□□□ -1.91
VPS53YJL029C YBR220CP38318 560 aa3.12□□□□□ -1.91
VPS53YJL029C MTC6P38849 526 aa3.12□□□□□ -1.91
VPS53YJL029C ECM1P39715 212 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 95.9 ms