RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W COS9P36034 407 aa5.39□□□□□ -1.55
PRE3YJL001W TSC10P38342 320 aa5.39□□□□□ -1.55
PRE3YJL001W MNN9P39107 395 aaKnown RBP5.39□□□□□ -1.55
PRE3YJL001W MOB2P43563 287 aa5.39□□□□□ -1.55
PRE3YJL001W MSE1P48525 536 aa5.39□□□□□ -1.55
PRE3YJL001W YIP4P53093 235 aa5.39□□□□□ -1.55
PRE3YJL001W MEP3P53390 489 aa5.39□□□□□ -1.55
PRE3YJL001W YML119WQ03208 357 aa5.39□□□□□ -1.55
PRE3YJL001W IRC19Q07843 230 aa5.39□□□□□ -1.55
PRE3YJL001W YDL109CQ12103 647 aa5.39□□□□□ -1.55
PRE3YJL001W ARG3P05150 338 aa5.38□□□□□ -1.55
PRE3YJL001W RPL15AP05748 204 aaKnown RBP5.38□□□□□ -1.55
PRE3YJL001W PET122P10355 254 aa5.38□□□□□ -1.55
PRE3YJL001W ERD2P18414 219 aa5.38□□□□□ -1.55
PRE3YJL001W CCA1P21269 546 aa5.38□□□□□ -1.55
PRE3YJL001W RPC19P28000 142 aaKnown RBP5.38□□□□□ -1.55
PRE3YJL001W SWH1P35845 1188 aa5.38□□□□□ -1.55
PRE3YJL001W CHK1P38147 527 aa5.38□□□□□ -1.55
PRE3YJL001W RCK1P38622 512 aa5.38□□□□□ -1.55
PRE3YJL001W RPL15BP54780 204 aaPredicted RBP5.38□□□□□ -1.55
PRE3YJL001W MMT1Q03218 510 aa5.38□□□□□ -1.55
PRE3YJL001W RSM28Q03430 361 aa5.38□□□□□ -1.55
PRE3YJL001W ACF2Q12168 779 aa5.38□□□□□ -1.55
PRE3YJL001W RLM1Q12224 676 aa5.38□□□□□ -1.55
PRE3YJL001W YKL068W-AQ3E826 78 aa5.38□□□□□ -1.55
PRE3YJL001W MHF1Q3E835 90 aa5.38□□□□□ -1.55
PRE3YJL001W MF(ALPHA)1P01149 165 aa5.37□□□□□ -1.55
PRE3YJL001W YCR061WP25639 631 aa5.37□□□□□ -1.55
PRE3YJL001W DAL80P26343 269 aa5.37□□□□□ -1.55
PRE3YJL001W CNE1P27825 502 aa5.37□□□□□ -1.55
PRE3YJL001W SIP2P34164 415 aaKnown RBP5.37□□□□□ -1.55
PRE3YJL001W ROT2P38138 954 aa5.37□□□□□ -1.55
PRE3YJL001W SDH8P38345 138 aa5.37□□□□□ -1.55
PRE3YJL001W BIG1P38813 335 aa5.37□□□□□ -1.55
PRE3YJL001W YER084WP40057 128 aa5.37□□□□□ -1.55
PRE3YJL001W YIL029CP40538 142 aa5.37□□□□□ -1.55
PRE3YJL001W BUD17P53727 317 aa5.37□□□□□ -1.55
PRE3YJL001W IGO1P53897 168 aa5.37□□□□□ -1.55
PRE3YJL001W SKO1Q02100 647 aa5.37□□□□□ -1.55
PRE3YJL001W LGE1Q02796 332 aaKnown RBP5.37□□□□□ -1.55
PRE3YJL001W MRP51Q02950 344 aa5.37□□□□□ -1.55
PRE3YJL001W RSC9Q03124 581 aa5.37□□□□□ -1.55
PRE3YJL001W SCS7Q03529 384 aa5.37□□□□□ -1.55
PRE3YJL001W RCE1Q03530 315 aa5.37□□□□□ -1.55
PRE3YJL001W YTH1Q06102 208 aaPredicted RBP5.37□□□□□ -1.55
PRE3YJL001W NIP7Q08962 181 aaKnown RBP5.37□□□□□ -1.55
PRE3YJL001W BTS1Q12051 335 aa5.37□□□□□ -1.55
PRE3YJL001W HSP30P25619 332 aa5.36□□□□□ -1.55
PRE3YJL001W RPB9P27999 122 aa5.36□□□□□ -1.55
PRE3YJL001W HIR2P32480 875 aa5.36□□□□□ -1.55
PRE3YJL001W ECM14P38836 430 aa5.36□□□□□ -1.55
PRE3YJL001W PMT6P42934 759 aa5.36□□□□□ -1.55
PRE3YJL001W SIP18P50263 79 aa5.36□□□□□ -1.55
PRE3YJL001W MRK1P50873 501 aa5.36□□□□□ -1.55
PRE3YJL001W TWF1P53250 332 aa5.36□□□□□ -1.55
PRE3YJL001W SED1Q01589 338 aa5.36□□□□□ -1.55
PRE3YJL001W RPL6AQ02326 176 aaKnown RBP5.36□□□□□ -1.55
PRE3YJL001W NGL2Q03264 515 aaKnown RBP5.36□□□□□ -1.55
PRE3YJL001W ATG38Q05789 226 aaKnown RBP5.36□□□□□ -1.55
PRE3YJL001W UTP21Q06078 939 aaPredicted RBP5.36□□□□□ -1.55
PRE3YJL001W CRT10Q08226 957 aa5.36□□□□□ -1.55
PRE3YJL001W TGS1Q12052 315 aa5.36□□□□□ -1.55
PRE3YJL001W YOR343CQ12484 108 aa5.36□□□□□ -1.55
PRE3YJL001W PEP4P07267 405 aaKnown RBP5.35□□□□□ -1.55
PRE3YJL001W LNP1P38878 278 aa5.35□□□□□ -1.55
PRE3YJL001W YIR020CP40575 100 aa5.35□□□□□ -1.55
PRE3YJL001W TDA10P42938 290 aa5.35□□□□□ -1.55
PRE3YJL001W NCA3P46955 337 aa5.35□□□□□ -1.55
PRE3YJL001W DIA3P52290 468 aa5.35□□□□□ -1.55
PRE3YJL001W SBH2P52871 88 aa5.35□□□□□ -1.55
PRE3YJL001W SYF2P53277 215 aaPredicted RBP5.35□□□□□ -1.55
PRE3YJL001W TIM44Q01852 431 aa5.35□□□□□ -1.55
PRE3YJL001W YPR147CQ06522 304 aaKnown RBP5.35□□□□□ -1.55
PRE3YJL001W MED2Q12124 431 aa5.35□□□□□ -1.55
PRE3YJL001W RDL1Q12305 139 aaKnown RBP5.35□□□□□ -1.55
PRE3YJL001W YPT6Q99260 215 aa5.35□□□□□ -1.55
PRE3YJL001W YER145C-AA0A023PYF4 145 aa5.34□□□□□ -1.55
PRE3YJL001W ATP2P00830 511 aaKnown RBP5.34□□□□□ -1.55
PRE3YJL001W RPB8P20436 146 aa5.34□□□□□ -1.55
PRE3YJL001W DBP3P20447 523 aaKnown RBP5.34□□□□□ -1.55
PRE3YJL001W EXG1P23776 448 aaKnown RBP5.34□□□□□ -1.55
PRE3YJL001W IST2P38250 946 aa5.34□□□□□ -1.55
PRE3YJL001W YHL044WP38727 235 aa5.34□□□□□ -1.55
PRE3YJL001W MET28P40573 187 aa5.34□□□□□ -1.55
PRE3YJL001W EGT2P42835 1041 aa5.34□□□□□ -1.55
PRE3YJL001W SHE4P51534 789 aa5.34□□□□□ -1.55
PRE3YJL001W MPP6P53725 186 aaPredicted RBP5.34□□□□□ -1.55
PRE3YJL001W CRZ1P53968 678 aa5.34□□□□□ -1.55
PRE3YJL001W YDR179W-AQ03983 463 aa5.34□□□□□ -1.55
PRE3YJL001W RAD33Q04231 177 aa5.34□□□□□ -1.55
PRE3YJL001W SPO77Q06134 477 aa5.34□□□□□ -1.55
PRE3YJL001W MFG1Q07684 458 aa5.34□□□□□ -1.55
PRE3YJL001W MSA1Q08471 629 aa5.34□□□□□ -1.55
PRE3YJL001W SRL2Q12020 392 aa5.34□□□□□ -1.55
PRE3YJL001W ATP6P00854 259 aa5.33□□□□□ -1.56
PRE3YJL001W REP1P03871 373 aa5.33□□□□□ -1.56
PRE3YJL001W TPK2P06245 380 aa5.33□□□□□ -1.56
PRE3YJL001W SUI3P09064 285 aaKnown RBP5.33□□□□□ -1.56
PRE3YJL001W YPK2P18961 677 aa5.33□□□□□ -1.56
PRE3YJL001W EXO70P19658 623 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms