RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W SPC19Q03954 165 aa8.93□□□□□ -0.98
UBA4YHR111W MLC2Q06580 163 aa8.93□□□□□ -0.98
UBA4YHR111W YOR289WQ12012 251 aaPredicted RBP8.93□□□□□ -0.98
UBA4YHR111W TAF3Q12297 353 aa8.93□□□□□ -0.98
UBA4YHR111W NFT1P0CE68 1218 aa8.92□□□□□ -0.98
UBA4YHR111W SAM35P14693 329 aa8.92□□□□□ -0.98
UBA4YHR111W CNA1P23287 553 aa8.92□□□□□ -0.98
UBA4YHR111W MRPS5P33759 307 aa8.92□□□□□ -0.98
UBA4YHR111W MAL32P38158 584 aa8.92□□□□□ -0.98
UBA4YHR111W VBA2P38358 474 aaKnown RBP8.92□□□□□ -0.98
UBA4YHR111W SAP30P38429 201 aa8.92□□□□□ -0.98
UBA4YHR111W SWP82P43554 623 aa8.92□□□□□ -0.98
UBA4YHR111W PGA1P53896 198 aa8.92□□□□□ -0.98
UBA4YHR111W YPQ2Q06328 317 aa8.92□□□□□ -0.98
UBA4YHR111W MEU1Q07938 337 aaKnown RBP RIP-Chip data8.92□□□□□ -0.98not detected
UBA4YHR111W RPL35AP0CX84 120 aaKnown RBP8.91□□□□□ -0.98
UBA4YHR111W RPL35BP0CX85 120 aaKnown RBP8.91□□□□□ -0.98
UBA4YHR111W PDA1P16387 420 aaKnown RBP8.91□□□□□ -0.98
UBA4YHR111W CPR2P23285 205 aa8.91□□□□□ -0.98
UBA4YHR111W STE50P25344 346 aa8.91□□□□□ -0.98
UBA4YHR111W OAC1P32332 324 aa8.91□□□□□ -0.98
UBA4YHR111W YBR063CP38083 404 aa8.91□□□□□ -0.98
UBA4YHR111W AMN1P38285 549 aaPredicted RBP8.91□□□□□ -0.98
UBA4YHR111W YER084WP40057 128 aa8.91□□□□□ -0.98
UBA4YHR111W YMR099CQ03161 297 aaKnown RBP8.91□□□□□ -0.98
UBA4YHR111W HOT1Q03213 719 aa8.91□□□□□ -0.98
UBA4YHR111W YMD8Q03697 442 aa8.91□□□□□ -0.98
UBA4YHR111W MRPL51Q06090 140 aaPredicted RBP8.91□□□□□ -0.98
UBA4YHR111W TAZ1Q06510 381 aa8.91□□□□□ -0.98
UBA4YHR111W YDL114WQ07530 308 aa8.91□□□□□ -0.98
UBA4YHR111W YPL119C-AQ3E751 87 aa8.91□□□□□ -0.98
UBA4YHR111W UTP20P35194 2493 aaKnown RBP8.9□□□□□ -0.98
UBA4YHR111W OPI3P05375 206 aa8.9□□□□□ -0.98
UBA4YHR111W PHO80P20052 293 aa8.9□□□□□ -0.98
UBA4YHR111W SED4P25365 1065 aa8.9□□□□□ -0.98
UBA4YHR111W YCL002CP25565 263 aa8.9□□□□□ -0.98
UBA4YHR111W YBR220CP38318 560 aa8.9□□□□□ -0.98
UBA4YHR111W GAT2P40209 560 aa8.9□□□□□ -0.98
UBA4YHR111W IRC5P43610 853 aa8.9□□□□□ -0.98
UBA4YHR111W NIT3P49954 291 aa8.9□□□□□ -0.98
UBA4YHR111W SIP18P50263 79 aa8.9□□□□□ -0.98
UBA4YHR111W COS10P52924 374 aa8.9□□□□□ -0.98
UBA4YHR111W MAL12P53341 584 aa8.9□□□□□ -0.98
UBA4YHR111W YNL165WP53891 406 aa8.9□□□□□ -0.98
UBA4YHR111W IPK1Q06667 281 aa8.9□□□□□ -0.98
UBA4YHR111W YPR097WQ06839 1073 aa8.9□□□□□ -0.98
UBA4YHR111W RTN2Q12443 393 aa8.9□□□□□ -0.98
UBA4YHR111W MSW1P04803 379 aa8.89□□□□□ -0.99
UBA4YHR111W FAR1P21268 830 aa8.89□□□□□ -0.99
UBA4YHR111W YME2P32843 850 aa8.89□□□□□ -0.99
UBA4YHR111W PHO90P39535 881 aa8.89□□□□□ -0.99
UBA4YHR111W YTA6P40328 754 aa8.89□□□□□ -0.99
UBA4YHR111W SFH5P47008 294 aa8.89□□□□□ -0.99
UBA4YHR111W VMA10P48836 114 aaKnown RBP8.89□□□□□ -0.99
UBA4YHR111W INN1P53901 409 aa8.89□□□□□ -0.99
UBA4YHR111W NUP49Q02199 472 aa8.89□□□□□ -0.99
UBA4YHR111W SNZ1Q03148 297 aa8.89□□□□□ -0.99
UBA4YHR111W RRP9Q06506 573 aaKnown RBP8.89□□□□□ -0.99
UBA4YHR111W HIS6P40545 261 aa8.88□□□□□ -0.99
UBA4YHR111W NQM1P53228 333 aaPredicted RBP8.88□□□□□ -0.99
UBA4YHR111W TIM10P87108 93 aa8.88□□□□□ -0.99
UBA4YHR111W YDR387CQ04162 555 aa8.88□□□□□ -0.99
UBA4YHR111W YLR040CQ07988 224 aa8.88□□□□□ -0.99
UBA4YHR111W IZH2Q12442 317 aa8.88□□□□□ -0.99
UBA4YHR111W YKL187CP34231 750 aa8.87□□□□□ -0.99
UBA4YHR111W SLZ1P40167 298 aa8.87□□□□□ -0.99
UBA4YHR111W TNA1P53322 534 aa8.87□□□□□ -0.99
UBA4YHR111W YLR345WQ06137 509 aa8.87□□□□□ -0.99
UBA4YHR111W MCH4Q08268 501 aa8.87□□□□□ -0.99
UBA4YHR111W ACF2Q12168 779 aa8.87□□□□□ -0.99
UBA4YHR111W KRR1P25586 316 aaPredicted RBP8.86□□□□□ -0.99
UBA4YHR111W NAB2P32505 525 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
UBA4YHR111W PIG2P40187 538 aa8.86□□□□□ -0.99
UBA4YHR111W PFS2P42841 465 aaKnown RBP8.86□□□□□ -0.99
UBA4YHR111W RET2P43621 546 aa8.86□□□□□ -0.99
UBA4YHR111W PET191Q02772 108 aa8.86□□□□□ -0.99
UBA4YHR111W PML1Q07930 204 aaPredicted RBP8.86□□□□□ -0.99
UBA4YHR111W RSC58Q07979 502 aa8.86□□□□□ -0.99
UBA4YHR111W SYC1Q08553 188 aaPredicted RBP8.86□□□□□ -0.99
UBA4YHR111W FIT3Q08907 204 aa8.86□□□□□ -0.99
UBA4YHR111W MCT1Q12283 360 aa8.86□□□□□ -0.99
UBA4YHR111W RNH203Q12338 110 aa8.86□□□□□ -0.99
UBA4YHR111W PCL9Q12477 304 aa8.86□□□□□ -0.99
UBA4YHR111W YGR161W-CQ3E744 92 aa8.86□□□□□ -0.99
UBA4YHR111W LSO1Q3E827 93 aa8.86□□□□□ -0.99
UBA4YHR111W BPH1P25356 2167 aa8.86□□□□□ -0.99
UBA4YHR111W RPS13P05756 151 aaKnown RBP8.85□□□□□ -0.99
UBA4YHR111W STE18P18852 110 aa8.85□□□□□ -0.99
UBA4YHR111W DBF20P32328 564 aa8.85□□□□□ -0.99
UBA4YHR111W SRP102P36057 244 aaPredicted RBP8.85□□□□□ -0.99
UBA4YHR111W EDS1P38073 919 aa8.85□□□□□ -0.99
UBA4YHR111W YBR096WP38256 230 aa8.85□□□□□ -0.99
UBA4YHR111W YBR285WP38354 144 aa8.85□□□□□ -0.99
UBA4YHR111W QRI1P43123 477 aaKnown RBP8.85□□□□□ -0.99
UBA4YHR111W MTM1P53320 366 aa8.85□□□□□ -0.99
UBA4YHR111W BUD17P53727 317 aa8.85□□□□□ -0.99
UBA4YHR111W DMA2P53924 522 aa8.85□□□□□ -0.99
UBA4YHR111W NNT1Q05874 261 aa8.85□□□□□ -0.99
UBA4YHR111W PST2Q12335 198 aaKnown RBP8.85□□□□□ -0.99
UBA4YHR111W DBP2P24783 546 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms