RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C HIS1P00498 297 aaKnown RBP5.28□□□□□ -1.56
SFB3YHR098C YOL163WP0CF20 169 aa5.28□□□□□ -1.56
SFB3YHR098C FUN14P18411 198 aa5.28□□□□□ -1.56
SFB3YHR098C MIR1P23641 311 aaKnown RBP5.28□□□□□ -1.56
SFB3YHR098C RSA4P25382 515 aaKnown RBP5.28□□□□□ -1.56
SFB3YHR098C KRE6P32486 720 aa5.28□□□□□ -1.56
SFB3YHR098C SHE1P38200 338 aa5.28□□□□□ -1.56
SFB3YHR098C BMT2P38278 337 aa5.28□□□□□ -1.56
SFB3YHR098C EHT1P38295 451 aa5.28□□□□□ -1.56
SFB3YHR098C IBA57P47158 497 aa5.28□□□□□ -1.56
SFB3YHR098C PAC10P48363 199 aa5.28□□□□□ -1.56
SFB3YHR098C SAY1P53324 424 aa5.28□□□□□ -1.56
SFB3YHR098C BRE5P53741 515 aaKnown RBP5.28□□□□□ -1.56
SFB3YHR098C ICT1Q12385 394 aa5.28□□□□□ -1.56
SFB3YHR098C MRX4Q12467 430 aa5.28□□□□□ -1.56
SFB3YHR098C SPT3P06844 337 aa5.28□□□□□ -1.56
SFB3YHR098C MATALPHA1P0CY06 175 aa5.28□□□□□ -1.56
SFB3YHR098C HMLALPHA1P0CY07 175 aa5.28□□□□□ -1.56
SFB3YHR098C CKA1P15790 372 aa5.28□□□□□ -1.56
SFB3YHR098C LRE1P25579 583 aaKnown RBP5.28□□□□□ -1.56
SFB3YHR098C MRPL15P36523 253 aa5.28□□□□□ -1.56
SFB3YHR098C CTF8P38877 133 aa5.28□□□□□ -1.56
SFB3YHR098C IME4P41833 600 aa5.28□□□□□ -1.56
SFB3YHR098C IDP2P41939 412 aa5.28□□□□□ -1.56
SFB3YHR098C YGR012WP53206 393 aa5.28□□□□□ -1.56
SFB3YHR098C YNR040WP53736 256 aa5.28□□□□□ -1.56
SFB3YHR098C DUS1P53759 423 aaKnown RBP5.28□□□□□ -1.56
SFB3YHR098C MET31Q03081 177 aa5.28□□□□□ -1.56
SFB3YHR098C CTK1Q03957 528 aaKnown RBP5.28□□□□□ -1.56
SFB3YHR098C ECM22Q05958 814 aaPredicted RBP5.28□□□□□ -1.56
SFB3YHR098C YLR346CQ06139 101 aa5.28□□□□□ -1.56
SFB3YHR098C Q0010Q9ZZX9 128 aa5.28□□□□□ -1.56
SFB3YHR098C STT4P37297 1900 aa5.28□□□□□ -1.56
SFB3YHR098C RAS1P01119 309 aa5.27□□□□□ -1.57
SFB3YHR098C PMA1P05030 918 aaKnown RBP5.27□□□□□ -1.57
SFB3YHR098C MET3P08536 511 aa5.27□□□□□ -1.57
SFB3YHR098C MRP17P28778 131 aa5.27□□□□□ -1.57
SFB3YHR098C SFA1P32771 386 aa5.27□□□□□ -1.57
SFB3YHR098C SNC2P33328 115 aa5.27□□□□□ -1.57
SFB3YHR098C ASH1P34233 588 aa5.27□□□□□ -1.57
SFB3YHR098C YKL107WP34251 309 aa5.27□□□□□ -1.57
SFB3YHR098C MRPL28P36527 147 aa5.27□□□□□ -1.57
SFB3YHR098C FLR1P38124 548 aa5.27□□□□□ -1.57
SFB3YHR098C UBA4P38820 440 aa5.27□□□□□ -1.57
SFB3YHR098C YIL108WP40483 696 aaKnown RBP5.27□□□□□ -1.57
SFB3YHR098C GPI15P53961 229 aa5.27□□□□□ -1.57
SFB3YHR098C ASI3P53983 676 aa5.27□□□□□ -1.57
SFB3YHR098C IRC15Q02733 499 aa5.27□□□□□ -1.57
SFB3YHR098C RRI1Q12468 440 aa5.27□□□□□ -1.57
SFB3YHR098C MTF1P14908 341 aaKnown RBP5.27□□□□□ -1.57
SFB3YHR098C SHE2P36068 246 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
SFB3YHR098C APE3P37302 537 aaKnown RBP5.27□□□□□ -1.57
SFB3YHR098C PNT1P38969 423 aa5.27□□□□□ -1.57
SFB3YHR098C UIP3P39547 235 aa5.27□□□□□ -1.57
SFB3YHR098C SKP1P52286 194 aa5.27□□□□□ -1.57
SFB3YHR098C SGF73P53165 657 aa5.27□□□□□ -1.57
SFB3YHR098C PEX31P53203 462 aa5.27□□□□□ -1.57
SFB3YHR098C FRE4P53746 719 aa5.27□□□□□ -1.57
SFB3YHR098C SPP2Q02521 185 aa5.27□□□□□ -1.57
SFB3YHR098C HRD3Q05787 833 aa5.27□□□□□ -1.57
SFB3YHR098C BSC1Q12140 328 aa5.27□□□□□ -1.57
SFB3YHR098C LPX1Q12405 387 aaKnown RBP5.27□□□□□ -1.57
SFB3YHR098C CDC7P06243 507 aa5.27□□□□□ -1.57
SFB3YHR098C MSF1P08425 469 aa5.27□□□□□ -1.57
SFB3YHR098C PRE7P23724 241 aaKnown RBP5.27□□□□□ -1.57
SFB3YHR098C ADK2P26364 225 aa5.27□□□□□ -1.57
SFB3YHR098C NRP1P32770 719 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
SFB3YHR098C TSA1P34760 196 aaKnown RBP5.27□□□□□ -1.57
SFB3YHR098C CTF13P35203 478 aa5.27□□□□□ -1.57
SFB3YHR098C SFK1P35735 353 aa5.27□□□□□ -1.57
SFB3YHR098C ASP1P38986 381 aaPredicted RBP5.27□□□□□ -1.57
SFB3YHR098C FAU1P40099 211 aa5.27□□□□□ -1.57
SFB3YHR098C OST6Q03723 332 aa5.27□□□□□ -1.57
SFB3YHR098C ARG7Q04728 441 aa5.27□□□□□ -1.57
SFB3YHR098C MED7Q08278 222 aa5.27□□□□□ -1.57
SFB3YHR098C INP53Q12271 1107 aa5.27□□□□□ -1.57
SFB3YHR098C DFR1P07807 211 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
SFB3YHR098C ADH5P38113 351 aaKnown RBP5.26□□□□□ -1.57
SFB3YHR098C UFE1P41834 346 aa5.26□□□□□ -1.57
SFB3YHR098C YJL171CP46992 396 aa5.26□□□□□ -1.57
SFB3YHR098C SHY1P53266 389 aa5.26□□□□□ -1.57
SFB3YHR098C SYF2P53277 215 aaPredicted RBP5.26□□□□□ -1.57
SFB3YHR098C NUP100Q02629 959 aa5.26□□□□□ -1.57
SFB3YHR098C VBA4Q04602 768 aaKnown RBP5.26□□□□□ -1.57
SFB3YHR098C RRP45Q05636 305 aaKnown RBP5.26□□□□□ -1.57
SFB3YHR098C AAD4Q07747 329 aa5.26□□□□□ -1.57
SFB3YHR098C YDL176WQ12027 708 aa5.26□□□□□ -1.57
SFB3YHR098C SKS1Q12505 502 aa5.26□□□□□ -1.57
SFB3YHR098C SEC59P20048 519 aa5.26□□□□□ -1.57
SFB3YHR098C TIP1P27654 210 aaPredicted RBP5.26□□□□□ -1.57
SFB3YHR098C DEG1P31115 442 aaKnown RBP5.26□□□□□ -1.57
SFB3YHR098C CLB6P32943 380 aa5.26□□□□□ -1.57
SFB3YHR098C PTH1P38876 190 aaKnown RBP5.26□□□□□ -1.57
SFB3YHR098C PCL7P40186 285 aa5.26□□□□□ -1.57
SFB3YHR098C UBC9P50623 157 aaPredicted RBP5.26□□□□□ -1.57
SFB3YHR098C MPA43P53583 542 aaPredicted RBP5.26□□□□□ -1.57
SFB3YHR098C YNR065CP53751 1116 aa5.26□□□□□ -1.57
SFB3YHR098C ECM7Q06200 448 aa5.26□□□□□ -1.57
SFB3YHR098C HBT1Q07653 1046 aaKnown RBP5.26□□□□□ -1.57
SFB3YHR098C YOR365CQ08844 703 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms