RNA–Protein interactions for RNA: YHL030W

ECM29, Transcript of Scaffold protein, yeastyeast

Gene ECM29, Length 5,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM29YHL030W YOL162WP0CF19 215 aa2.56□□□□□ -2
ECM29YHL030W URA6P15700 204 aa2.56□□□□□ -2
ECM29YHL030W FUN14P18411 198 aa2.56□□□□□ -2
ECM29YHL030W PTP1P25044 335 aa2.56□□□□□ -2
ECM29YHL030W SRO77P38163 1010 aa2.56□□□□□ -2
ECM29YHL030W PTC7P38797 343 aa2.56□□□□□ -2
ECM29YHL030W ASP1P38986 381 aaPredicted RBP2.56□□□□□ -2
ECM29YHL030W MET30P39014 640 aa2.56□□□□□ -2
ECM29YHL030W POG1P40473 351 aa2.56□□□□□ -2
ECM29YHL030W YIL077CP40508 320 aa2.56□□□□□ -2
ECM29YHL030W YJR056CP47115 236 aa2.56□□□□□ -2
ECM29YHL030W PNC1P53184 216 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W PAU12P53343 120 aa2.56□□□□□ -2
ECM29YHL030W RNY1Q02933 434 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W AEP3Q12089 606 aa2.56□□□□□ -2
ECM29YHL030W DFR1P07807 211 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
ECM29YHL030W PRB1P09232 635 aa2.56□□□□□ -2
ECM29YHL030W SPS4P09937 338 aa2.56□□□□□ -2
ECM29YHL030W RPS21AP0C0V8 87 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W CKA1P15790 372 aa2.56□□□□□ -2
ECM29YHL030W ACH1P32316 526 aa2.56□□□□□ -2
ECM29YHL030W PAU2P32612 120 aa2.56□□□□□ -2
ECM29YHL030W PTR2P32901 601 aa2.56□□□□□ -2
ECM29YHL030W GLY1P37303 387 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W MNN2P38069 597 aa2.56□□□□□ -2
ECM29YHL030W YIR016WP40572 265 aa2.56□□□□□ -2
ECM29YHL030W TRM9P49957 279 aa2.56□□□□□ -2
ECM29YHL030W MEP3P53390 489 aa2.56□□□□□ -2
ECM29YHL030W YDL129WQ07555 291 aa2.56□□□□□ -2
ECM29YHL030W RRP40Q08285 240 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W YPL257WQ08974 193 aa2.56□□□□□ -2
ECM29YHL030W ERV2Q12284 196 aa2.56□□□□□ -2
ECM29YHL030W PSF1Q12488 208 aa2.56□□□□□ -2
ECM29YHL030W YGR161W-CQ3E744 92 aa2.56□□□□□ -2
ECM29YHL030W YHR213W-AQ8TGT4 77 aa2.56□□□□□ -2
ECM29YHL030W AI4P03878 556 aa2.56□□□□□ -2
ECM29YHL030W TRP4P07285 380 aaPredicted RBP2.56□□□□□ -2
ECM29YHL030W SLM5P25345 492 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W PRO1P32264 428 aa2.56□□□□□ -2
ECM29YHL030W THI4P32318 326 aa2.56□□□□□ -2
ECM29YHL030W AFR1P33304 620 aa2.56□□□□□ -2
ECM29YHL030W SOF1P33750 489 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W HXT5P38695 592 aa2.56□□□□□ -2
ECM29YHL030W YHR180WP38868 163 aa2.56□□□□□ -2
ECM29YHL030W SKN7P38889 622 aa2.56□□□□□ -2
ECM29YHL030W PRP39P39682 629 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W SEC72P39742 193 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W YIL089WP40500 205 aa2.56□□□□□ -2
ECM29YHL030W TED1P40533 473 aa2.56□□□□□ -2
ECM29YHL030W FAF1P40546 346 aaPredicted RBP2.56□□□□□ -2
ECM29YHL030W IRC7P43623 340 aa2.56□□□□□ -2
ECM29YHL030W YCL001W-AP87012 153 aa2.56□□□□□ -2
ECM29YHL030W YMR279CQ03263 540 aa2.56□□□□□ -2
ECM29YHL030W YML079WQ03629 201 aa2.56□□□□□ -2
ECM29YHL030W RSF1Q05043 376 aa2.56□□□□□ -2
ECM29YHL030W YLR173WQ06247 608 aa2.56□□□□□ -2
ECM29YHL030W PRP11Q07350 266 aaPredicted RBP2.56□□□□□ -2
ECM29YHL030W XYL2Q07993 356 aa2.56□□□□□ -2
ECM29YHL030W LEU9Q12166 604 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W FRE7Q12333 620 aa2.56□□□□□ -2
ECM29YHL030W YOR338WQ99326 363 aa2.56□□□□□ -2
ECM29YHL030W CDC28P00546 298 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W YPT1P01123 206 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W YML003WP0CF16 290 aa2.56□□□□□ -2
ECM29YHL030W YCP4P25349 247 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W IDH1P28834 360 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
ECM29YHL030W DBP8P38719 431 aa2.56□□□□□ -2
ECM29YHL030W TRR2P38816 342 aa2.56□□□□□ -2
ECM29YHL030W IBA57P47158 497 aa2.56□□□□□ -2
ECM29YHL030W SGF73P53165 657 aa2.56□□□□□ -2
ECM29YHL030W YAP1802P53309 568 aa2.56□□□□□ -2
ECM29YHL030W GPI15P53961 229 aa2.56□□□□□ -2
ECM29YHL030W VPS28Q02767 242 aa2.56□□□□□ -2
ECM29YHL030W YPL113CQ02961 396 aa2.56□□□□□ -2
ECM29YHL030W PLB2Q03674 706 aa2.56□□□□□ -2
ECM29YHL030W YPR172WQ06608 200 aa2.56□□□□□ -2
ECM29YHL030W SDO1Q07953 250 aaKnown RBP2.56□□□□□ -2
ECM29YHL030W BDS1Q08347 646 aa2.56□□□□□ -2
ECM29YHL030W SCP1Q08873 200 aa2.56□□□□□ -2
ECM29YHL030W RTN2Q12443 393 aa2.56□□□□□ -2
ECM29YHL030W RPL25P04456 142 aaKnown RBP2.55□□□□□ -2
ECM29YHL030W RPC40P07703 335 aaKnown RBP2.55□□□□□ -2
ECM29YHL030W DOA4P32571 926 aa2.55□□□□□ -2
ECM29YHL030W SNC2P33328 115 aa2.55□□□□□ -2
ECM29YHL030W YOR062CP36025 268 aa2.55□□□□□ -2
ECM29YHL030W YGL114WP53134 725 aa2.55□□□□□ -2
ECM29YHL030W SYF2P53277 215 aaPredicted RBP2.55□□□□□ -2
ECM29YHL030W YNR062CP53748 327 aa2.55□□□□□ -2
ECM29YHL030W PRM1P53835 661 aa2.55□□□□□ -2
ECM29YHL030W ARO10Q06408 635 aa2.55□□□□□ -2
ECM29YHL030W RRT7Q07829 113 aa2.55□□□□□ -2
ECM29YHL030W YOL036WQ08206 761 aa2.55□□□□□ -2
ECM29YHL030W COA6Q3E846 104 aa2.55□□□□□ -2
ECM29YHL030W RPS17AP02407 136 aaKnown RBP2.55□□□□□ -2
ECM29YHL030W RPS17BP14127 136 aaKnown RBP2.55□□□□□ -2
ECM29YHL030W PPA2P28239 310 aa2.55□□□□□ -2
ECM29YHL030W TRS65P32893 560 aa2.55□□□□□ -2
ECM29YHL030W PPZ2P33329 710 aa2.55□□□□□ -2
ECM29YHL030W ECT1P33412 323 aa2.55□□□□□ -2
ECM29YHL030W YKR051WP36142 418 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms