RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A ZRT1P32804 376 aa2.73□□□□□ -1.97
EFG1YGR271C-A VPS21P36017 210 aaKnown RBP2.73□□□□□ -1.97
EFG1YGR271C-A CBT1P36038 271 aaPredicted RBP2.73□□□□□ -1.97
EFG1YGR271C-A MRX3P38172 270 aa2.73□□□□□ -1.97
EFG1YGR271C-A MIC12P38341 106 aa2.73□□□□□ -1.97
EFG1YGR271C-A YHR035WP38769 630 aa2.73□□□□□ -1.97
EFG1YGR271C-A SMF2P38778 549 aa2.73□□□□□ -1.97
EFG1YGR271C-A NPT1P39683 429 aaKnown RBP2.73□□□□□ -1.97
EFG1YGR271C-A ERG28P40030 148 aa2.73□□□□□ -1.97
EFG1YGR271C-A ABM1P47146 123 aa2.73□□□□□ -1.97
EFG1YGR271C-A LSG1P53145 640 aaKnown RBP2.73□□□□□ -1.97
EFG1YGR271C-A IRC4Q03036 179 aa2.73□□□□□ -1.97
EFG1YGR271C-A CSM3Q04659 317 aa2.73□□□□□ -1.97
EFG1YGR271C-A CDC123Q05791 360 aa2.73□□□□□ -1.97
EFG1YGR271C-A ASR1Q06834 288 aa2.73□□□□□ -1.97
EFG1YGR271C-A CSM4Q08955 156 aa2.73□□□□□ -1.97
EFG1YGR271C-A TPT1Q12272 230 aaKnown RBP2.73□□□□□ -1.97
EFG1YGR271C-A SNF8Q12483 233 aa2.73□□□□□ -1.97
EFG1YGR271C-A POM152P39685 1337 aa2.72□□□□□ -1.97
EFG1YGR271C-A ILV1P00927 576 aaKnown RBP2.72□□□□□ -1.97
EFG1YGR271C-A TEF1P02994 458 aaKnown RBP2.72□□□□□ -1.97
EFG1YGR271C-A TCP1P12612 559 aaKnown RBP2.72□□□□□ -1.97
EFG1YGR271C-A POX1P13711 748 aa2.72□□□□□ -1.97
EFG1YGR271C-A YMR31P19955 123 aa2.72□□□□□ -1.97
EFG1YGR271C-A RNA15P25299 296 aaPredicted RBP2.72□□□□□ -1.97
EFG1YGR271C-A CSE1P33307 960 aa2.72□□□□□ -1.97
EFG1YGR271C-A KDX1P36005 433 aa2.72□□□□□ -1.97
EFG1YGR271C-A DTR1P38125 572 aa2.72□□□□□ -1.97
EFG1YGR271C-A PRS2P38620 318 aaKnown RBP2.72□□□□□ -1.97
EFG1YGR271C-A RCK2P38623 610 aa2.72□□□□□ -1.97
EFG1YGR271C-A GEP4P38812 185 aa2.72□□□□□ -1.97
EFG1YGR271C-A COX15P40086 486 aa2.72□□□□□ -1.97
EFG1YGR271C-A YCH1P42937 148 aa2.72□□□□□ -1.97
EFG1YGR271C-A YFL040WP43562 540 aa2.72□□□□□ -1.97
EFG1YGR271C-A TAD2P47058 250 aa2.72□□□□□ -1.97
EFG1YGR271C-A HOC1P47124 396 aa2.72□□□□□ -1.97
EFG1YGR271C-A CWC23P52868 283 aaPredicted RBP2.72□□□□□ -1.97
EFG1YGR271C-A GET1P53192 235 aa2.72□□□□□ -1.97
EFG1YGR271C-A ZRG17P53735 605 aa2.72□□□□□ -1.97
EFG1YGR271C-A RRP17Q04031 235 aaPredicted RBP2.72□□□□□ -1.97
EFG1YGR271C-A VIK1Q12045 647 aa2.72□□□□□ -1.97
EFG1YGR271C-A YKL183C-AQ3E765 70 aa2.72□□□□□ -1.97
EFG1YGR271C-A DET1Q99288 334 aaKnown RBP2.72□□□□□ -1.97
EFG1YGR271C-A IZH4Q99393 312 aa2.72□□□□□ -1.97
EFG1YGR271C-A SSC1P0CS90 654 aaKnown RBP2.71□□□□□ -1.98
EFG1YGR271C-A RPL35AP0CX84 120 aaKnown RBP2.71□□□□□ -1.98
EFG1YGR271C-A RPL35BP0CX85 120 aaKnown RBP2.71□□□□□ -1.98
EFG1YGR271C-A YAK1P14680 807 aa2.71□□□□□ -1.98
EFG1YGR271C-A MRPL6P32904 214 aa2.71□□□□□ -1.98
EFG1YGR271C-A TIR2P33890 251 aa2.71□□□□□ -1.98
EFG1YGR271C-A AST1P35183 429 aa2.71□□□□□ -1.98
EFG1YGR271C-A YKL063CP35725 167 aa2.71□□□□□ -1.98
EFG1YGR271C-A GPX2P38143 162 aa2.71□□□□□ -1.98
EFG1YGR271C-A URA8P38627 578 aaPredicted RBP2.71□□□□□ -1.98
EFG1YGR271C-A YHK8P38776 514 aa2.71□□□□□ -1.98
EFG1YGR271C-A YPT35P38815 214 aaKnown RBP2.71□□□□□ -1.98
EFG1YGR271C-A YNL194CP40169 301 aa2.71□□□□□ -1.98
EFG1YGR271C-A ERG10P41338 398 aaKnown RBP2.71□□□□□ -1.98
EFG1YGR271C-A YGR067CP53243 804 aa2.71□□□□□ -1.98
EFG1YGR271C-A CPD1P53314 239 aa2.71□□□□□ -1.98
EFG1YGR271C-A RTC4P53850 401 aa2.71□□□□□ -1.98
EFG1YGR271C-A VBA1Q04301 562 aa2.71□□□□□ -1.98
EFG1YGR271C-A ATG17Q06410 417 aa2.71□□□□□ -1.98
EFG1YGR271C-A NDE2Q07500 545 aa2.71□□□□□ -1.98
EFG1YGR271C-A GAT3Q07928 141 aa2.71□□□□□ -1.98
EFG1YGR271C-A POM33Q12164 279 aa2.71□□□□□ -1.98
EFG1YGR271C-A HTB1P02293 131 aaKnown RBP2.7□□□□□ -1.98
EFG1YGR271C-A HTB2P02294 131 aa2.7□□□□□ -1.98
EFG1YGR271C-A RPL31AP0C2H8 113 aaKnown RBP2.7□□□□□ -1.98
EFG1YGR271C-A SNF6P18888 332 aa2.7□□□□□ -1.98
EFG1YGR271C-A CKA2P19454 339 aa2.7□□□□□ -1.98
EFG1YGR271C-A IDH1P28834 360 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
EFG1YGR271C-A SPS19P32573 292 aaKnown RBP2.7□□□□□ -1.98
EFG1YGR271C-A TAF14P35189 244 aa2.7□□□□□ -1.98
EFG1YGR271C-A YIA6P40556 373 aa2.7□□□□□ -1.98
EFG1YGR271C-A RPL10P41805 221 aaKnown RBP2.7□□□□□ -1.98
EFG1YGR271C-A ASG7P46993 209 aa2.7□□□□□ -1.98
EFG1YGR271C-A SFH5P47008 294 aa2.7□□□□□ -1.98
EFG1YGR271C-A YJR030CP47101 745 aa2.7□□□□□ -1.98
EFG1YGR271C-A NOP19P53317 196 aaPredicted RBP2.7□□□□□ -1.98
EFG1YGR271C-A SSU72P53538 206 aaPredicted RBP2.7□□□□□ -1.98
EFG1YGR271C-A MTQ1P53944 314 aa2.7□□□□□ -1.98
EFG1YGR271C-A YDR209CQ03480 137 aa2.7□□□□□ -1.98
EFG1YGR271C-A FAR8Q05040 523 aa2.7□□□□□ -1.98
EFG1YGR271C-A CDD1Q06549 142 aa2.7□□□□□ -1.98
EFG1YGR271C-A YDL144CQ07589 356 aa2.7□□□□□ -1.98
EFG1YGR271C-A MEX67Q99257 599 aaKnown RBP2.7□□□□□ -1.98
EFG1YGR271C-A QCR7P00128 127 aa2.69□□□□□ -1.98
EFG1YGR271C-A NAM2P11325 894 aa2.69□□□□□ -1.98
EFG1YGR271C-A CAP2P13517 287 aa2.69□□□□□ -1.98
EFG1YGR271C-A FBA1P14540 359 aaKnown RBP2.69□□□□□ -1.98
EFG1YGR271C-A CMK2P22517 447 aa2.69□□□□□ -1.98
EFG1YGR271C-A EXG1P23776 448 aaKnown RBP2.69□□□□□ -1.98
EFG1YGR271C-A SSO1P32867 290 aa2.69□□□□□ -1.98
EFG1YGR271C-A UBC6P33296 250 aaPredicted RBP2.69□□□□□ -1.98
EFG1YGR271C-A MAK5P38112 773 aaPredicted RBP2.69□□□□□ -1.98
EFG1YGR271C-A PMT4P46971 762 aa2.69□□□□□ -1.98
EFG1YGR271C-A YPT32P51996 222 aaKnown RBP2.69□□□□□ -1.98
EFG1YGR271C-A VEL1P53058 206 aa2.69□□□□□ -1.98
EFG1YGR271C-A MST27P53176 234 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms