RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	ECM5	Q03214	1411 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	RPS13	P05756	151 aa	Known RBP	2.98	□□□□□ -1.93
CCM1	YGR150C	ZWF1	P11412	505 aa	Known RBP	2.98	□□□□□ -1.93
CCM1	YGR150C	AMD1	P15274	810 aa	Known RBP	2.98	□□□□□ -1.93
CCM1	YGR150C	CPT1	P17898	393 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	SLY1	P22213	666 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	CAF4	P36130	643 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	YCR087C-A	P37263	153 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	ARN1	P38731	627 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	YHK8	P38776	514 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	PRM10	P42946	383 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	IRC18	P47056	224 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	YJR030C	P47101	745 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	NUP57	P48837	541 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	ASN1	P49089	572 aa	Known RBP	2.98	□□□□□ -1.93
CCM1	YGR150C	MMS2	P53152	137 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	SWC4	P53201	476 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
CCM1	YGR150C	GOR1	P53839	350 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	YDR248C	Q03786	193 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	RIF2	Q06208	395 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	RSA1	Q08932	381 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	YLR053C	Q12026	108 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	EDE1	P34216	1381 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	ISY1	P21374	235 aa	Predicted RBP	2.97	□□□□□ -1.93
CCM1	YGR150C	PMT2	P31382	759 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	KAR9	P32526	644 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	FRE2	P36033	711 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	YBR096W	P38256	230 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	YPC1	P38298	316 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	YBP1	P38315	674 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	WWM1	P43582	211 aa	Known RBP	2.97	□□□□□ -1.93
CCM1	YGR150C	NSA1	P53136	463 aa	Predicted RBP	2.97	□□□□□ -1.93
CCM1	YGR150C	YNR066C	P53752	436 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	IBD2	P53892	351 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	NRK1	P53915	240 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	YMR166C	Q03829	368 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	SWF1	Q04629	336 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	BNA5	Q05979	453 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	HNT3	Q08702	217 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	YDR018C	Q12185	396 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	ICT1	Q12385	394 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	PNS1	Q12412	539 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	BI2	P03873	423 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	DSF1	P0CX08	502 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	YNR073C	P0CX09	502 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	COQ3	P27680	312 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	TIR2	P33890	251 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	JEN1	P36035	616 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	ECM13	P38195	257 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	SDS24	P38314	527 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	OSH3	P38713	996 aa	Known RBP	2.97	□□□□□ -1.93
CCM1	YGR150C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
CCM1	YGR150C	QRI1	P43123	477 aa	Known RBP	2.97	□□□□□ -1.93
CCM1	YGR150C	PMT4	P46971	762 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	UBC13	P52490	153 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	JAC1	P53193	184 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	NUP49	Q02199	472 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	TRM82	Q03774	444 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	GLO2	Q05584	274 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	HEM25	Q07534	307 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	TAF10	Q12030	206 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	NSL1	Q12143	216 aa		2.97	□□□□□ -1.93
CCM1	YGR150C	UTP23	Q12339	254 aa	Known RBP	2.97	□□□□□ -1.93
CCM1	YGR150C	SNU23	Q12368	194 aa	Predicted RBP	2.97	□□□□□ -1.93
CCM1	YGR150C	SIR4	P11978	1358 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	DPM1	P14020	267 aa	Known RBP	2.96	□□□□□ -1.94
CCM1	YGR150C	YCR100C	P25606	316 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	CPR3	P25719	182 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	SPT4	P32914	102 aa	Predicted RBP	2.96	□□□□□ -1.94
CCM1	YGR150C	YKL075C	P36083	450 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	ATG12	P38316	186 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	YAP3	P38749	330 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	CIN5	P40917	295 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	PEX31	P53203	462 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	GTR2	P53290	341 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	MSO1	P53604	210 aa	Known RBP	2.96	□□□□□ -1.94
CCM1	YGR150C	COS1	P53822	381 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	YPL034W	Q03083	165 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	TAZ1	Q06510	381 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	THI72	Q08579	599 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	MCA1	Q08601	432 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	YPR064W	Q12492	139 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	SPT3	P06844	337 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	YAR066W	P0CX18	203 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	YHR214W	P0CX19	203 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	CAP2	P13517	287 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	EXO70	P19658	623 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	PHO80	P20052	293 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	EXG1	P23776	448 aa	Known RBP	2.96	□□□□□ -1.94
CCM1	YGR150C	ELM1	P32801	640 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	CLG1	P35190	452 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	YNK1	P36010	153 aa	Known RBP	2.96	□□□□□ -1.94
CCM1	YGR150C	PCL5	P38794	229 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	NDT80	P38830	627 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	CYC2	P38909	366 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	TES1	P41903	349 aa	Known RBP	2.96	□□□□□ -1.94
CCM1	YGR150C	TRM9	P49957	279 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	HCH1	P53834	153 aa		2.96	□□□□□ -1.94
CCM1	YGR150C	YLR152C	P54072	576 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 42 ms