RNA–Protein interactions for RNA: YGR027W-B

YGR027W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR027W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR027W-BYGR027W-B YAE1P47118 141 aaPredicted RBP3.06□□□□□ -1.92
YGR027W-BYGR027W-B YGR021WP53212 290 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B TGS1Q12052 315 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B TOP3P13099 656 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B VPS34P22543 875 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B PHM8P40025 321 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B RPS13P05756 151 aaKnown RBP3.06□□□□□ -1.92
YGR027W-BYGR027W-B SAG1P20840 650 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B ROX3P25046 220 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B RRP43P25359 394 aaPredicted RBP3.06□□□□□ -1.92
YGR027W-BYGR027W-B MPE1P35728 441 aaKnown RBP3.06□□□□□ -1.92
YGR027W-BYGR027W-B FAT1P38225 669 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B SDP1P40479 209 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B NQM1P53228 333 aaPredicted RBP3.06□□□□□ -1.92
YGR027W-BYGR027W-B ERG5P54781 538 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B YLR407WQ06070 228 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B ATP12P22135 325 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B LSB5P25369 354 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B APL3P38065 1025 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B ROT2P38138 954 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B YEL075CP39972 122 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B SLM2P53955 656 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B JLP1Q12358 412 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B AAC1P04710 309 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B SEC12P11655 471 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B CTS1P29029 562 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B YLF2P38746 405 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B CWC22P53333 577 aaKnown RBP3.06□□□□□ -1.92
YGR027W-BYGR027W-B MAL13P53338 473 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B YNR071CP53757 342 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B NUP100Q02629 959 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B RRT7Q07829 113 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B USV1Q12132 391 aa3.06□□□□□ -1.92
YGR027W-BYGR027W-B RPL25P04456 142 aaKnown RBP3.05□□□□□ -1.92
YGR027W-BYGR027W-B IME2P32581 645 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B ALK2P32789 676 aaPredicted RBP3.05□□□□□ -1.92
YGR027W-BYGR027W-B ZRT3P34240 503 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B BCD1P38772 366 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B FYV6P53913 173 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B MTG1Q03151 367 aaPredicted RBP3.05□□□□□ -1.92
YGR027W-BYGR027W-B STE3P06783 470 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B SEC22P22214 214 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B ACT1P60010 375 aaKnown RBP3.05□□□□□ -1.92
YGR027W-BYGR027W-B SPG4Q04438 115 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B UAF30Q08747 228 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B FRE3Q08905 711 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B LAA1P39526 2014 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B YBR184WP38299 523 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B CIN2P46670 268 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B GPI8P49018 411 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B APM1Q00776 475 aaPredicted RBP3.05□□□□□ -1.92
YGR027W-BYGR027W-B ATG26Q06321 1198 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B SOG2Q08817 791 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B ALG6Q12001 544 aaKnown RBP3.05□□□□□ -1.92
YGR027W-BYGR027W-B ATP10P18496 279 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B BNA4P38169 460 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B YIL012WP40551 113 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B RRT5P43607 289 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B ARC35P53731 342 aaKnown RBP3.05□□□□□ -1.92
YGR027W-BYGR027W-B TLG1Q03322 224 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B SPC19Q03954 165 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B MRPL51Q06090 140 aaPredicted RBP3.05□□□□□ -1.92
YGR027W-BYGR027W-B RFU1Q08003 200 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B THI72Q08579 599 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B YPS3Q12303 508 aa3.05□□□□□ -1.92
YGR027W-BYGR027W-B YAP1P19880 650 aaKnown RBP3.04□□□□□ -1.92
YGR027W-BYGR027W-B ATP7P30902 174 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B NRP1P32770 719 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
YGR027W-BYGR027W-B RCN1P36054 211 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B ATP3P38077 311 aaKnown RBP3.04□□□□□ -1.92
YGR027W-BYGR027W-B COA1P40452 197 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B STE23Q06010 1027 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B YEH2Q07950 538 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B RRG7Q08774 242 aaPredicted RBP3.04□□□□□ -1.92
YGR027W-BYGR027W-B URA3P03962 267 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B HTS1P07263 546 aaKnown RBP3.04□□□□□ -1.92
YGR027W-BYGR027W-B RPL20AP0CX23 172 aaKnown RBP3.04□□□□□ -1.92
YGR027W-BYGR027W-B RPL20BP0CX24 172 aaPredicted RBP3.04□□□□□ -1.92
YGR027W-BYGR027W-B EXO70P19658 623 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B DBP2P24783 546 aaKnown RBP3.04□□□□□ -1.92
YGR027W-BYGR027W-B YNK1P36010 153 aaKnown RBP3.04□□□□□ -1.92
YGR027W-BYGR027W-B ECM34P38728 170 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B YHK8P38776 514 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B ATG4P53867 494 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B SED1Q01589 338 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B YKR011CQ02209 353 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B RAV2Q03956 351 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B SNO4Q04902 237 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B SYT1Q06836 1226 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B BRE4Q07660 1125 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B CRT10Q08226 957 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B HSP33Q08914 237 aaKnown RBP3.04□□□□□ -1.92
YGR027W-BYGR027W-B HSP32Q08992 237 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B ZWF1P11412 505 aaKnown RBP3.04□□□□□ -1.92
YGR027W-BYGR027W-B RER1P25560 188 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B YCR099CP25657 155 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B COQ3P27680 312 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B ATS1P31386 333 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B YKL187CP34231 750 aa3.04□□□□□ -1.92
YGR027W-BYGR027W-B ECM8P38246 354 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms