RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W PNS1Q12412 539 aa6.06□□□□□ -1.44
NUP49YGL172W YOR343CQ12484 108 aa6.06□□□□□ -1.44
NUP49YGL172W SFG1Q12507 346 aa6.06□□□□□ -1.44
NUP49YGL172W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.06□□□□□ -1.44
NUP49YGL172W TY1A-OLQ92392 440 aaKnown RBP6.06□□□□□ -1.44
NUP49YGL172W FLO9P39712 1322 aa6.05□□□□□ -1.44
NUP49YGL172W YAL064W-BO13512 126 aa6.05□□□□□ -1.44
NUP49YGL172W RPP1AP05318 106 aaPredicted RBP6.05□□□□□ -1.44
NUP49YGL172W PEP4P07267 405 aaKnown RBP6.05□□□□□ -1.44
NUP49YGL172W MDH2P22133 377 aa6.05□□□□□ -1.44
NUP49YGL172W NFS1P25374 497 aa6.05□□□□□ -1.44
NUP49YGL172W SPC29P33419 253 aa6.05□□□□□ -1.44
NUP49YGL172W MSN4P33749 630 aa6.05□□□□□ -1.44
NUP49YGL172W ECM4P36156 370 aa6.05□□□□□ -1.44
NUP49YGL172W GDI1P39958 451 aaKnown RBP6.05□□□□□ -1.44
NUP49YGL172W KRE29P40026 464 aa6.05□□□□□ -1.44
NUP49YGL172W MNN5P46982 586 aa6.05□□□□□ -1.44
NUP49YGL172W YJR096WP47137 282 aa6.05□□□□□ -1.44
NUP49YGL172W RRN9P53437 365 aa6.05□□□□□ -1.44
NUP49YGL172W PGA1P53896 198 aa6.05□□□□□ -1.44
NUP49YGL172W SCS7Q03529 384 aa6.05□□□□□ -1.44
NUP49YGL172W YLR352WQ06479 807 aa6.05□□□□□ -1.44
NUP49YGL172W ADE8P04161 214 aa6.04□□□□□ -1.44
NUP49YGL172W MET2P08465 486 aa6.04□□□□□ -1.44
NUP49YGL172W STE12P13574 688 aa6.04□□□□□ -1.44
NUP49YGL172W IDP1P21954 428 aaKnown RBP6.04□□□□□ -1.44
NUP49YGL172W PTC6P25646 442 aa6.04□□□□□ -1.44
NUP49YGL172W COS9P36034 407 aa6.04□□□□□ -1.44
NUP49YGL172W YLF2P38746 405 aa6.04□□□□□ -1.44
NUP49YGL172W IPT1P38954 527 aa6.04□□□□□ -1.44
NUP49YGL172W RFC4P40339 323 aaKnown RBP6.04□□□□□ -1.44
NUP49YGL172W BUD17P53727 317 aa6.04□□□□□ -1.44
NUP49YGL172W MRPL1Q04599 285 aa6.04□□□□□ -1.44
NUP49YGL172W YLR040CQ07988 224 aa6.04□□□□□ -1.44
NUP49YGL172W SOG2Q08817 791 aa6.04□□□□□ -1.44
NUP49YGL172W YDL176WQ12027 708 aa6.04□□□□□ -1.44
NUP49YGL172W PRS5Q12265 496 aaKnown RBP6.04□□□□□ -1.44
NUP49YGL172W SET6Q12529 373 aa6.04□□□□□ -1.44
NUP49YGL172W MED11Q99278 115 aa6.04□□□□□ -1.44
NUP49YGL172W MET17P06106 444 aa6.03□□□□□ -1.44
NUP49YGL172W UTR1P21373 530 aa6.03□□□□□ -1.44
NUP49YGL172W GAS1P22146 559 aaKnown RBP6.03□□□□□ -1.44
NUP49YGL172W NDC1P32500 655 aa6.03□□□□□ -1.44
NUP49YGL172W PAD1P33751 242 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
NUP49YGL172W YHR035WP38769 630 aa6.03□□□□□ -1.44
NUP49YGL172W MDM31P38880 579 aa6.03□□□□□ -1.44
NUP49YGL172W AVT6P40074 448 aa6.03□□□□□ -1.44
NUP49YGL172W CAF16P43569 289 aa6.03□□□□□ -1.44
NUP49YGL172W SSY5P47002 699 aa6.03□□□□□ -1.44
NUP49YGL172W COS10P52924 374 aa6.03□□□□□ -1.44
NUP49YGL172W RPN14P53196 417 aa6.03□□□□□ -1.44
NUP49YGL172W NQM1P53228 333 aaPredicted RBP6.03□□□□□ -1.44
NUP49YGL172W FIN1Q03898 291 aa6.03□□□□□ -1.44
NUP49YGL172W GAS2Q06135 555 aa6.03□□□□□ -1.44
NUP49YGL172W YPR147CQ06522 304 aaKnown RBP6.03□□□□□ -1.44
NUP49YGL172W MLC2Q06580 163 aa6.03□□□□□ -1.44
NUP49YGL172W GSH2Q08220 491 aa6.03□□□□□ -1.44
NUP49YGL172W BAG7Q12128 409 aa6.03□□□□□ -1.44
NUP49YGL172W YGK3Q12222 375 aaPredicted RBP6.03□□□□□ -1.44
NUP49YGL172W CBP6P07253 162 aaPredicted RBP6.02□□□□□ -1.45
NUP49YGL172W PHO2P07269 559 aa6.02□□□□□ -1.45
NUP49YGL172W PHO80P20052 293 aa6.02□□□□□ -1.45
NUP49YGL172W CNA1P23287 553 aa6.02□□□□□ -1.45
NUP49YGL172W YCL002CP25565 263 aa6.02□□□□□ -1.45
NUP49YGL172W CHK1P38147 527 aa6.02□□□□□ -1.45
NUP49YGL172W UBX6P47049 396 aa6.02□□□□□ -1.45
NUP49YGL172W TMA20P89886 181 aaPredicted RBP6.02□□□□□ -1.45
NUP49YGL172W SPC19Q03954 165 aa6.02□□□□□ -1.45
NUP49YGL172W YMR087WQ04299 284 aa6.02□□□□□ -1.45
NUP49YGL172W VBA4Q04602 768 aaKnown RBP6.02□□□□□ -1.45
NUP49YGL172W TAZ1Q06510 381 aa6.02□□□□□ -1.45
NUP49YGL172W YOR289WQ12012 251 aaPredicted RBP6.02□□□□□ -1.45
NUP49YGL172W HMS1Q12398 434 aa6.02□□□□□ -1.45
NUP49YGL172W TRM10Q12400 293 aa6.02□□□□□ -1.45
NUP49YGL172W PCL9Q12477 304 aa6.02□□□□□ -1.45
NUP49YGL172W KIN28P06242 306 aa6.01□□□□□ -1.45
NUP49YGL172W NFT1P0CE68 1218 aa6.01□□□□□ -1.45
NUP49YGL172W ENA1P13587 1091 aa6.01□□□□□ -1.45
NUP49YGL172W CPR2P23285 205 aa6.01□□□□□ -1.45
NUP49YGL172W PPA2P28239 310 aa6.01□□□□□ -1.45
NUP49YGL172W VPH2P32341 215 aa6.01□□□□□ -1.45
NUP49YGL172W MAL32P38158 584 aa6.01□□□□□ -1.45
NUP49YGL172W RIX1P38883 763 aaPredicted RBP6.01□□□□□ -1.45
NUP49YGL172W PHO90P39535 881 aa6.01□□□□□ -1.45
NUP49YGL172W AIM10P39965 576 aaKnown RBP6.01□□□□□ -1.45
NUP49YGL172W GZF3P42944 551 aaKnown RBP6.01□□□□□ -1.45
NUP49YGL172W SFH5P47008 294 aa6.01□□□□□ -1.45
NUP49YGL172W MAL12P53341 584 aa6.01□□□□□ -1.45
NUP49YGL172W MNT4P53745 580 aa6.01□□□□□ -1.45
NUP49YGL172W BSC5P53755 489 aa6.01□□□□□ -1.45
NUP49YGL172W ENA2Q01896 1091 aa6.01□□□□□ -1.45
NUP49YGL172W NUP49Q02199 472 aa6.01□□□□□ -1.45
NUP49YGL172W NUP116Q02630 1113 aa6.01□□□□□ -1.45
NUP49YGL172W PLB2Q03674 706 aa6.01□□□□□ -1.45
NUP49YGL172W RKM1Q08961 583 aaPredicted RBP6.01□□□□□ -1.45
NUP49YGL172W ENA5Q12691 1091 aa6.01□□□□□ -1.45
NUP49YGL172W PRP8P33334 2413 aaKnown RBP6.01□□□□□ -1.45
NUP49YGL172W MCM10P32354 571 aa6□□□□□ -1.45
NUP49YGL172W VBA2P38358 474 aaKnown RBP6□□□□□ -1.45
NUP49YGL172W GPI16P38875 610 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 81.4 ms