RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	UBA4	P38820	440 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	PFD1	P46988	109 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	ABM1	P47146	123 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	BUL1	P48524	976 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	PRM1	P53835	661 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	YKR011C	Q02209	353 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	BOP2	Q06150	570 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	FYV7	Q12247	151 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	INP53	Q12271	1107 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	AIR2	Q12476	344 aa	Known RBP	5.06	□□□□□ -1.6
VTC2	YFL004W	SKS1	Q12505	502 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	ZPS1	Q12512	249 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	YJR112W-A	Q3E743	109 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	COA6	Q3E846	104 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	RAS1	P01119	309 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	CDC9	P04819	755 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	KIN28	P06242	306 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	RPS26A	P39938	119 aa	Known RBP	5.05	□□□□□ -1.6
VTC2	YFL004W	RPS26B	P39939	119 aa	Known RBP	5.05	□□□□□ -1.6
VTC2	YFL004W	CFD1	P40558	293 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	YJR149W	P47177	404 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	CYT2	Q00873	224 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	KEI1	Q06346	221 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	HBT1	Q07653	1046 aa	Known RBP	5.05	□□□□□ -1.6
VTC2	YFL004W	AAD4	Q07747	329 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	YLR040C	Q07988	224 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	TRM13	Q12383	476 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	SRN2	Q99176	213 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	RPL9A	P05738	191 aa	Known RBP	5.05	□□□□□ -1.6
VTC2	YFL004W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
VTC2	YFL004W	URA6	P15700	204 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	PDA1	P16387	420 aa	Known RBP	5.05	□□□□□ -1.6
VTC2	YFL004W	SEC62	P21825	274 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	SPS19	P32573	292 aa	Known RBP	5.05	□□□□□ -1.6
VTC2	YFL004W	MTH1	P35198	433 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	PRM9	P39551	298 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	FAU1	P40099	211 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	EMC5	P40540	141 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	GLC8	P41818	229 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	GAT1	P43574	510 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	SIP4	P46954	829 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	TIS11	P47977	285 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	RPL9B	P51401	191 aa	Known RBP	5.05	□□□□□ -1.6
VTC2	YFL004W	UFD1	P53044	361 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	YGL114W	P53134	725 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	MTQ1	P53944	314 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	YMR253C	Q04835	414 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	DFG5	Q05031	458 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	HRD3	Q05787	833 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	YOR365C	Q08844	703 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	ERP4	Q12450	207 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	TMA17	Q12513	150 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	YIL134C-A	Q45U18	67 aa		5.05	□□□□□ -1.6
VTC2	YFL004W	HTS1	P07263	546 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	ATP5	P09457	212 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	YML003W	P0CF16	290 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	SIS1	P25294	352 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	GMH1	P36125	273 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	BET3	P36149	193 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	AGP2	P38090	596 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	SRO77	P38163	1010 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	SHG1	P38337	142 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	PHO90	P39535	881 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	MXR1	P40029	184 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	ELO3	P40319	345 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	FLX1	P40464	311 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	YJL171C	P46992	396 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	NUP57	P48837	541 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	AVT4	P50944	713 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	COQ6	P53318	479 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	AAH1	P53909	347 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	TY1A-DR2	Q03964	440 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	ARA2	Q04212	335 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	TY1A-MR1	Q04215	440 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	FIT1	Q04433	528 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	CRF1	Q04930	467 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	NOC4	Q06512	552 aa	Predicted RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	IPK1	Q06667	281 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	MRX9	Q07349	420 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	TY1A-BL	Q12266	440 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	RRP42	Q12277	265 aa	Predicted RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	RPS31	P05759	152 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	UBI4	P0CG63	381 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	RPL40A	P0CH08	128 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	RPL40B	P0CH09	128 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	EXG1	P23776	448 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	LRE1	P25579	583 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	COQ3	P27680	312 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	EHD3	P28817	500 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	PPG1	P32838	368 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	SKN1	P33336	771 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	LOT5	P34234	306 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	EMC3	P36039	253 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	YPT31	P38555	223 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	RRP3	P38712	501 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	PTH1	P38876	190 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	CHL4	P38907	458 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	AXL2	P38928	823 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	GAT2	P40209	560 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	EXG2	P52911	562 aa		5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms