RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W CHK1P38147 527 aa6.18□□□□□ -1.42
PDA1YER178W ARN2P38724 620 aa6.18□□□□□ -1.42
PDA1YER178W AVT6P40074 448 aa6.18□□□□□ -1.42
PDA1YER178W NQM1P53228 333 aaPredicted RBP6.18□□□□□ -1.42
PDA1YER178W NUP49Q02199 472 aa6.18□□□□□ -1.42
PDA1YER178W TLG1Q03322 224 aa6.18□□□□□ -1.42
PDA1YER178W MRL1Q06815 381 aa6.18□□□□□ -1.42
PDA1YER178W RAF1Q06891 181 aa6.18□□□□□ -1.42
PDA1YER178W BPH1P25356 2167 aa6.18□□□□□ -1.42
PDA1YER178W RAS1P01119 309 aa6.17□□□□□ -1.42
PDA1YER178W SBA1P28707 216 aaKnown RBP6.17□□□□□ -1.42
PDA1YER178W CAM1P29547 415 aaKnown RBP6.17□□□□□ -1.42
PDA1YER178W PRP21P32524 280 aaPredicted RBP6.17□□□□□ -1.42
PDA1YER178W MTR2P34232 184 aaKnown RBP6.17□□□□□ -1.42
PDA1YER178W BAP2P38084 609 aa6.17□□□□□ -1.42
PDA1YER178W YGP1P38616 354 aaKnown RBP6.17□□□□□ -1.42
PDA1YER178W IPT1P38954 527 aa6.17□□□□□ -1.42
PDA1YER178W YIL165CP40446 119 aa6.17□□□□□ -1.42
PDA1YER178W PAM16P42949 149 aa6.17□□□□□ -1.42
PDA1YER178W RET2P43621 546 aa6.17□□□□□ -1.42
PDA1YER178W SSY5P47002 699 aa6.17□□□□□ -1.42
PDA1YER178W VMA10P48836 114 aaKnown RBP6.17□□□□□ -1.42
PDA1YER178W NIT3P49954 291 aa6.17□□□□□ -1.42
PDA1YER178W PPT1P53043 513 aa6.17□□□□□ -1.42
PDA1YER178W SLD3P53135 668 aa6.17□□□□□ -1.42
PDA1YER178W PET191Q02772 108 aa6.17□□□□□ -1.42
PDA1YER178W RKM1Q08961 583 aaPredicted RBP6.17□□□□□ -1.42
PDA1YER178W RPS13P05756 151 aaKnown RBP6.16□□□□□ -1.42
PDA1YER178W ENA1P13587 1091 aa6.16□□□□□ -1.42
PDA1YER178W STE18P18852 110 aa6.16□□□□□ -1.42
PDA1YER178W PHO80P20052 293 aa6.16□□□□□ -1.42
PDA1YER178W EXG1P23776 448 aaKnown RBP6.16□□□□□ -1.42
PDA1YER178W SED4P25365 1065 aa6.16□□□□□ -1.42
PDA1YER178W MLH1P38920 769 aa6.16□□□□□ -1.42
PDA1YER178W IDP2P41939 412 aa6.16□□□□□ -1.42
PDA1YER178W MDE1P47095 244 aa6.16□□□□□ -1.42
PDA1YER178W YJR098CP47139 656 aa6.16□□□□□ -1.42
PDA1YER178W APM1Q00776 475 aaPredicted RBP6.16□□□□□ -1.42
PDA1YER178W ENA2Q01896 1091 aa6.16□□□□□ -1.42
PDA1YER178W YAP6Q03935 383 aa6.16□□□□□ -1.42
PDA1YER178W YMR087WQ04299 284 aa6.16□□□□□ -1.42
PDA1YER178W YLR040CQ07988 224 aa6.16□□□□□ -1.42
PDA1YER178W MCH4Q08268 501 aa6.16□□□□□ -1.42
PDA1YER178W FRE5Q08908 694 aa6.16□□□□□ -1.42
PDA1YER178W ENA5Q12691 1091 aa6.16□□□□□ -1.42
PDA1YER178W RPS16AP0CX51 143 aaKnown RBP6.15□□□□□ -1.42
PDA1YER178W RPS16BP0CX52 143 aaKnown RBP6.15□□□□□ -1.42
PDA1YER178W FPS1P23900 669 aa6.15□□□□□ -1.42
PDA1YER178W SHE1P38200 338 aa6.15□□□□□ -1.42
PDA1YER178W YER084WP40057 128 aa6.15□□□□□ -1.42
PDA1YER178W PDS1P40316 373 aaPredicted RBP6.15□□□□□ -1.42
PDA1YER178W HIS6P40545 261 aa6.15□□□□□ -1.42
PDA1YER178W IDS2P46958 469 aa6.15□□□□□ -1.42
PDA1YER178W SFH5P47008 294 aa6.15□□□□□ -1.42
PDA1YER178W SAY1P53324 424 aa6.15□□□□□ -1.42
PDA1YER178W MKC7P53379 596 aa6.15□□□□□ -1.42
PDA1YER178W BUD17P53727 317 aa6.15□□□□□ -1.42
PDA1YER178W ELA1P53861 379 aaPredicted RBP6.15□□□□□ -1.42
PDA1YER178W NUP116Q02630 1113 aa6.15□□□□□ -1.42
PDA1YER178W SSY1Q03770 852 aa6.15□□□□□ -1.42
PDA1YER178W RNH1Q04740 348 aa6.15□□□□□ -1.42
PDA1YER178W MRPL51Q06090 140 aaPredicted RBP6.15□□□□□ -1.42
PDA1YER178W YPQ2Q06328 317 aa6.15□□□□□ -1.42
PDA1YER178W YDL114WQ07530 308 aa6.15□□□□□ -1.42
PDA1YER178W THP3Q12049 470 aaKnown RBP6.15□□□□□ -1.42
PDA1YER178W RTN2Q12443 393 aa6.15□□□□□ -1.42
PDA1YER178W MCM1P11746 286 aa6.14□□□□□ -1.43
PDA1YER178W STE50P25344 346 aa6.14□□□□□ -1.43
PDA1YER178W AMN1P38285 549 aaPredicted RBP6.14□□□□□ -1.43
PDA1YER178W GVP36P40531 326 aaKnown RBP6.14□□□□□ -1.43
PDA1YER178W COS10P52924 374 aa6.14□□□□□ -1.43
PDA1YER178W VOA1P53262 265 aa6.14□□□□□ -1.43
PDA1YER178W MRPL19P53875 158 aa6.14□□□□□ -1.43
PDA1YER178W YNL165WP53891 406 aa6.14□□□□□ -1.43
PDA1YER178W HAS1Q03532 505 aaKnown RBP6.14□□□□□ -1.43
PDA1YER178W SPC19Q03954 165 aa6.14□□□□□ -1.43
PDA1YER178W HLR1Q04429 423 aa6.14□□□□□ -1.43
PDA1YER178W RSA3Q05942 220 aaKnown RBP6.14□□□□□ -1.43
PDA1YER178W YLR173WQ06247 608 aa6.14□□□□□ -1.43
PDA1YER178W TRM10Q12400 293 aa6.14□□□□□ -1.43
PDA1YER178W PDA1P16387 420 aaKnown RBP6.13□□□□□ -1.43
PDA1YER178W IDP1P21954 428 aaKnown RBP6.13□□□□□ -1.43
PDA1YER178W RPA135P22138 1203 aaKnown RBP6.13□□□□□ -1.43
PDA1YER178W DBP2P24783 546 aaKnown RBP6.13□□□□□ -1.43
PDA1YER178W FUN19P28003 413 aaPredicted RBP6.13□□□□□ -1.43
PDA1YER178W ECM4P36156 370 aa6.13□□□□□ -1.43
PDA1YER178W VBA2P38358 474 aaKnown RBP6.13□□□□□ -1.43
PDA1YER178W PHO90P39535 881 aa6.13□□□□□ -1.43
PDA1YER178W MSS2P40990 351 aa6.13□□□□□ -1.43
PDA1YER178W PFS2P42841 465 aaKnown RBP6.13□□□□□ -1.43
PDA1YER178W MOB2P43563 287 aa6.13□□□□□ -1.43
PDA1YER178W SCW11P53189 542 aa6.13□□□□□ -1.43
PDA1YER178W TNA1P53322 534 aa6.13□□□□□ -1.43
PDA1YER178W RCE1Q03530 315 aa6.13□□□□□ -1.43
PDA1YER178W YMR252CQ04814 134 aa6.13□□□□□ -1.43
PDA1YER178W MLC2Q06580 163 aa6.13□□□□□ -1.43
PDA1YER178W IPK1Q06667 281 aa6.13□□□□□ -1.43
PDA1YER178W NCE102Q12207 173 aaRIP-Chip data6.13□□□□□ -1.43not detected
PDA1YER178W MCT1Q12283 360 aa6.13□□□□□ -1.43
PDA1YER178W PCL9Q12477 304 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms