RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W IRC15Q02733 499 aa3.66□□□□□ -1.82
SPT3YDR392W MRX4Q12467 430 aa3.66□□□□□ -1.82
SPT3YDR392W RRI1Q12468 440 aa3.66□□□□□ -1.82
SPT3YDR392W ARO3P14843 370 aaKnown RBP3.65□□□□□ -1.83
SPT3YDR392W RPB5P20434 215 aa3.65□□□□□ -1.83
SPT3YDR392W SCO1P23833 295 aa3.65□□□□□ -1.83
SPT3YDR392W YCL068CP25593 260 aa3.65□□□□□ -1.83
SPT3YDR392W IAH1P41734 238 aa3.65□□□□□ -1.83
SPT3YDR392W YPT11P48559 417 aa3.65□□□□□ -1.83
SPT3YDR392W MEP3P53390 489 aa3.65□□□□□ -1.83
SPT3YDR392W YML119WQ03208 357 aa3.65□□□□□ -1.83
SPT3YDR392W YMR166CQ03829 368 aa3.65□□□□□ -1.83
SPT3YDR392W FDH1Q08911 376 aa3.65□□□□□ -1.83
SPT3YDR392W RAD1P06777 1100 aa3.64□□□□□ -1.83
SPT3YDR392W ATP12P22135 325 aa3.64□□□□□ -1.83
SPT3YDR392W ROX3P25046 220 aa3.64□□□□□ -1.83
SPT3YDR392W DPB3P27344 201 aa3.64□□□□□ -1.83
SPT3YDR392W SEC66P33754 206 aa3.64□□□□□ -1.83
SPT3YDR392W HAT2P39984 401 aa3.64□□□□□ -1.83
SPT3YDR392W AIM20P40451 204 aa3.64□□□□□ -1.83
SPT3YDR392W YRB1P41920 201 aaKnown RBP3.64□□□□□ -1.83
SPT3YDR392W CLD1P53264 445 aa3.64□□□□□ -1.83
SPT3YDR392W IST1P53843 298 aaPredicted RBP3.64□□□□□ -1.83
SPT3YDR392W PEX12Q04370 399 aa3.64□□□□□ -1.83
SPT3YDR392W GRH1Q04410 372 aaKnown RBP3.64□□□□□ -1.83
SPT3YDR392W STE23Q06010 1027 aa3.64□□□□□ -1.83
SPT3YDR392W NFI1Q12216 726 aa3.64□□□□□ -1.83
SPT3YDR392W ATG34Q12292 412 aa3.64□□□□□ -1.83
SPT3YDR392W MRPL23Q12487 163 aaPredicted RBP3.64□□□□□ -1.83
SPT3YDR392W YAL064W-BO13512 126 aa3.63□□□□□ -1.83
SPT3YDR392W RPL6BP05739 176 aaKnown RBP3.63□□□□□ -1.83
SPT3YDR392W EXG1P23776 448 aaKnown RBP3.63□□□□□ -1.83
SPT3YDR392W RPC19P28000 142 aaKnown RBP3.63□□□□□ -1.83
SPT3YDR392W YEL043WP32618 956 aa3.63□□□□□ -1.83
SPT3YDR392W SPP381P38282 291 aaPredicted RBP3.63□□□□□ -1.83
SPT3YDR392W YHR177WP38867 453 aa3.63□□□□□ -1.83
SPT3YDR392W PET100P38958 111 aa3.63□□□□□ -1.83
SPT3YDR392W YFR054CP43622 192 aa3.63□□□□□ -1.83
SPT3YDR392W TRS85P46944 698 aa3.63□□□□□ -1.83
SPT3YDR392W YJR142WP47173 342 aa3.63□□□□□ -1.83
SPT3YDR392W RPS12P48589 143 aaKnown RBP3.63□□□□□ -1.83
SPT3YDR392W SWP1Q02795 286 aa3.63□□□□□ -1.83
SPT3YDR392W ATG16Q03818 150 aa3.63□□□□□ -1.83
SPT3YDR392W YKU80Q04437 629 aa3.63□□□□□ -1.83
SPT3YDR392W TSR2Q06672 205 aaKnown RBP3.63□□□□□ -1.83
SPT3YDR392W YDL242WQ07746 117 aa3.63□□□□□ -1.83
SPT3YDR392W YOR378WQ08902 515 aa3.63□□□□□ -1.83
SPT3YDR392W STE2D6VTK4 431 aa3.62□□□□□ -1.83
SPT3YDR392W CKI1P20485 582 aa3.62□□□□□ -1.83
SPT3YDR392W TCA17P32613 152 aa3.62□□□□□ -1.83
SPT3YDR392W NPL6P32832 435 aa3.62□□□□□ -1.83
SPT3YDR392W MNN2P38069 597 aa3.62□□□□□ -1.83
SPT3YDR392W YBR241CP38142 488 aa3.62□□□□□ -1.83
SPT3YDR392W FMP23P38231 175 aa3.62□□□□□ -1.83
SPT3YDR392W YHR035WP38769 630 aa3.62□□□□□ -1.83
SPT3YDR392W INA22P40576 216 aa3.62□□□□□ -1.83
SPT3YDR392W TIM11P81449 96 aaPredicted RBP3.62□□□□□ -1.83
SPT3YDR392W KRE28Q04431 385 aa3.62□□□□□ -1.83
SPT3YDR392W SPG4Q04438 115 aa3.62□□□□□ -1.83
SPT3YDR392W ECI1Q05871 280 aa3.62□□□□□ -1.83
SPT3YDR392W GGA1Q06336 557 aa3.62□□□□□ -1.83
SPT3YDR392W GSH2Q08220 491 aa3.62□□□□□ -1.83
SPT3YDR392W FAP7Q12055 197 aaPredicted RBP3.62□□□□□ -1.83
SPT3YDR392W IES3Q12345 250 aa3.62□□□□□ -1.83
SPT3YDR392W YER175W-AQ8TGU4 54 aa3.62□□□□□ -1.83
SPT3YDR392W RPL39P04650 51 aa3.61□□□□□ -1.83
SPT3YDR392W CBS2P14905 389 aa3.61□□□□□ -1.83
SPT3YDR392W AFG1P32317 509 aa3.61□□□□□ -1.83
SPT3YDR392W PTH2P34222 208 aa3.61□□□□□ -1.83
SPT3YDR392W ARN1P38731 627 aa3.61□□□□□ -1.83
SPT3YDR392W IDS2P46958 469 aa3.61□□□□□ -1.83
SPT3YDR392W UPF3P48412 387 aaKnown RBP3.61□□□□□ -1.83
SPT3YDR392W CDH1P53197 566 aa3.61□□□□□ -1.83
SPT3YDR392W YGR126WP53274 230 aa3.61□□□□□ -1.83
SPT3YDR392W MAL13P53338 473 aa3.61□□□□□ -1.83
SPT3YDR392W PET191Q02772 108 aa3.61□□□□□ -1.83
SPT3YDR392W EKI1Q03764 534 aa3.61□□□□□ -1.83
SPT3YDR392W RVB1Q03940 463 aaKnown RBP3.61□□□□□ -1.83
SPT3YDR392W FAR8Q05040 523 aa3.61□□□□□ -1.83
SPT3YDR392W ADE13Q05911 482 aaKnown RBP3.61□□□□□ -1.83
SPT3YDR392W RRP9Q06506 573 aaKnown RBP3.61□□□□□ -1.83
SPT3YDR392W YPL191CQ08930 360 aa3.61□□□□□ -1.83
SPT3YDR392W APL4Q12028 832 aa3.61□□□□□ -1.83
SPT3YDR392W THP3Q12049 470 aaKnown RBP3.61□□□□□ -1.83
SPT3YDR392W GPA1P08539 472 aa3.6□□□□□ -1.83
SPT3YDR392W PMR1P13586 950 aa3.6□□□□□ -1.83
SPT3YDR392W OLE1P21147 510 aaKnown RBP3.6□□□□□ -1.83
SPT3YDR392W PAP1P29468 568 aaKnown RBP3.6□□□□□ -1.83
SPT3YDR392W PAD1P33751 242 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SPT3YDR392W NIC96P34077 839 aa3.6□□□□□ -1.83
SPT3YDR392W VPS21P36017 210 aaKnown RBP3.6□□□□□ -1.83
SPT3YDR392W ECM4P36156 370 aa3.6□□□□□ -1.83
SPT3YDR392W GVP36P40531 326 aaKnown RBP3.6□□□□□ -1.83
SPT3YDR392W RTS2P40962 232 aa3.6□□□□□ -1.83
SPT3YDR392W GCN20P43535 752 aaKnown RBP3.6□□□□□ -1.83
SPT3YDR392W BOL2P53082 120 aa3.6□□□□□ -1.83
SPT3YDR392W GPG1P53130 126 aa3.6□□□□□ -1.83
SPT3YDR392W VPS75P53853 264 aa3.6□□□□□ -1.83
SPT3YDR392W ABZ2Q03266 374 aa3.6□□□□□ -1.83
SPT3YDR392W RTT103Q05543 409 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms