RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	YBR013C	P38215	129 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	AIM3	P38266	947 aa	Known RBP	4.62	□□□□□ -1.67
PAL1	YDR348C	YHL041W	P38730	149 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	PTH1	P38876	190 aa	Known RBP	4.62	□□□□□ -1.67
PAL1	YDR348C	AGE2	P40529	298 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	AGX1	P43567	385 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	DAN1	P47178	298 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	HNT2	P49775	206 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	EXG2	P52911	562 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	VPS62	P53285	467 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	YSA1	Q01976	231 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	YDR132C	Q03900	495 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	ELP6	Q04868	273 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	HOF1	Q05080	669 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	TMA10	Q06177	86 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	IPK1	Q06667	281 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	YLR122C	Q12312	125 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	RRI1	Q12468	440 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	CDC21	P06785	304 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	PUT1	P09368	476 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	SPS4	P09937	338 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	MRPL8	P22353	238 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	CDC50	P25656	391 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	MRPL9	P31334	269 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	FUN26	P31381	517 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	MTH1	P35198	433 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	THI80	P35202	319 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	SDH4	P37298	181 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	POL12	P38121	705 aa	Predicted RBP	4.62	□□□□□ -1.67
PAL1	YDR348C	FLR1	P38124	548 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	DTR1	P38125	572 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	LDB7	P38210	180 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	SAF1	P38352	637 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	LRP1	P38801	184 aa	Known RBP	4.62	□□□□□ -1.67
PAL1	YDR348C	ARO9	P38840	513 aa	Predicted RBP	4.62	□□□□□ -1.67
PAL1	YDR348C	AXL2	P38928	823 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	ASP1	P38986	381 aa	Predicted RBP	4.62	□□□□□ -1.67
PAL1	YDR348C	NIT1	P40447	199 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	IST3	P40565	148 aa	Predicted RBP	4.62	□□□□□ -1.67
PAL1	YDR348C	MUP1	P50276	574 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	SWC4	P53201	476 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	SYF2	P53277	215 aa	Predicted RBP	4.62	□□□□□ -1.67
PAL1	YDR348C	TRM44	Q02648	567 aa	Known RBP	4.62	□□□□□ -1.67
PAL1	YDR348C	MRPS17	Q03246	237 aa	Predicted RBP	4.62	□□□□□ -1.67
PAL1	YDR348C	RIM13	Q03792	727 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	HLR1	Q04429	423 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	VBA4	Q04602	768 aa	Known RBP	4.62	□□□□□ -1.67
PAL1	YDR348C	SSL1	Q04673	461 aa	Predicted RBP	4.62	□□□□□ -1.67
PAL1	YDR348C	YMR252C	Q04814	134 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	KEI1	Q06346	221 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	ATX2	Q12067	313 aa		4.62	□□□□□ -1.67
PAL1	YDR348C	COX3	P00420	269 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	SCEI	P03882	235 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	GAL80	P04387	435 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	LEU4	P06208	619 aa	Known RBP	4.61	□□□□□ -1.67
PAL1	YDR348C	CDC7	P06243	507 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	CAR2	P07991	424 aa	Known RBP	4.61	□□□□□ -1.67
PAL1	YDR348C	YOL163W	P0CF20	169 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	MRP1	P10662	321 aa	Known RBP	4.61	□□□□□ -1.67
PAL1	YDR348C	RSA4	P25382	515 aa	Known RBP	4.61	□□□□□ -1.67
PAL1	YDR348C	POF1	P25576	258 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
PAL1	YDR348C	PPG1	P32838	368 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	CTF13	P35203	478 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	SCO2	P38072	301 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	PAU24	P38155	120 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	FUI1	P38196	639 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	PEX32	P38292	413 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	CHL4	P38907	458 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	MXR1	P40029	184 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	GET2	P40056	285 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	GAT1	P43574	510 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	YGL185C	P53100	379 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	YGL117W	P53133	265 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	FRE4	P53746	719 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	NRK1	P53915	240 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	GPI15	P53961	229 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	RHO4	Q00246	291 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
PAL1	YDR348C	YKR011C	Q02209	353 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	OST6	Q03723	332 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	UTP15	Q04305	513 aa	Known RBP	4.61	□□□□□ -1.67
PAL1	YDR348C	YPR127W	Q06494	345 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	SDO1	Q07953	250 aa	Known RBP	4.61	□□□□□ -1.67
PAL1	YDR348C	CRT10	Q08226	957 aa		4.61	□□□□□ -1.67
PAL1	YDR348C	ERG27	Q12452	347 aa	Known RBP	4.61	□□□□□ -1.67
PAL1	YDR348C	YLR422W	Q06409	1932 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	RPL11A	P0C0W9	174 aa	Known RBP	4.6	□□□□□ -1.67
PAL1	YDR348C	SEC59	P20048	519 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	RBK1	P25332	333 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	MSK1	P32048	576 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	RPD3	P32561	433 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	COS9	P36034	407 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	DRE2	P36152	348 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	ZTA1	P38230	334 aa	Known RBP	4.6	□□□□□ -1.67
PAL1	YDR348C	BUL1	P48524	976 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	SOL1	P50278	321 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	PAU12	P53343	120 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	RNH202	Q05635	350 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	YLR036C	Q07986	203 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms