RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	RPS27A	P35997	82 aa	Known RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	SDS22	P36047	338 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	BET3	P36149	193 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	DTR1	P38125	572 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	RPS27B	P38711	82 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
SUP35	YDR172W	CFD1	P40558	293 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	YGL235W	P53071	178 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	MRPL22	P53881	309 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	SMA2	Q04658	369 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	RGC1	Q06108	1083 aa	Known RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	DIC1	Q06143	298 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	YPR174C	Q06616	221 aa	Predicted RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	IPK1	Q06667	281 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	YEH1	Q07804	573 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	GUP2	Q08929	609 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	YPR1	Q12458	312 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	HFA1	P32874	2273 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	HIS3	P06633	220 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	YPK2	P18961	677 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	GAS1	P22146	559 aa	Known RBP	4.27	□□□□□ -1.73
SUP35	YDR172W	PRP28	P23394	588 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	EXG1	P23776	448 aa	Known RBP	4.27	□□□□□ -1.73
SUP35	YDR172W	BOS1	P25385	244 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	AHC2	P25649	128 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	PRE4	P30657	266 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	TIM12	P32830	109 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	HIS7	P33734	552 aa	Known RBP	4.27	□□□□□ -1.73
SUP35	YDR172W	MTC2	P34246	357 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	TMA19	P35691	167 aa	Known RBP	4.27	□□□□□ -1.73
SUP35	YDR172W	ANR2	P36090	516 aa	Predicted RBP	4.27	□□□□□ -1.73
SUP35	YDR172W	PAU24	P38155	120 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	EXO84	P38261	753 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	OCA5	P38738	679 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	RPP1	P38786	293 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	YIL166C	P40445	542 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	YIL152W	P40455	235 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	SDP1	P40479	209 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	SYG1	P40528	902 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	MDV1	P47025	714 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	TPN1	P53099	579 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	VOA1	P53262	265 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	SAY1	P53324	424 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	PAU12	P53343	120 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	LSM7	P53905	115 aa	Known RBP	4.27	□□□□□ -1.73
SUP35	YDR172W	ERG13	P54839	491 aa	Known RBP	4.27	□□□□□ -1.73
SUP35	YDR172W	DML1	Q03652	475 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	PLP1	Q04004	230 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	SIZ1	Q04195	904 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	SEC13	Q04491	297 aa	Known RBP	4.27	□□□□□ -1.73
SUP35	YDR172W	SNO4	Q04902	237 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	TPO3	Q06451	622 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	YPR172W	Q06608	200 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	YOR365C	Q08844	703 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	HSP33	Q08914	237 aa	Known RBP	4.27	□□□□□ -1.73
SUP35	YDR172W	HSP32	Q08992	237 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	YOR283W	Q12040	230 aa	Known RBP	4.27	□□□□□ -1.73
SUP35	YDR172W	ATG41	Q12048	136 aa		4.27	□□□□□ -1.73
SUP35	YDR172W	CDC9	P04819	755 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	RPL20A	P0CX23	172 aa	Known RBP	4.26	□□□□□ -1.73
SUP35	YDR172W	RPL20B	P0CX24	172 aa	Predicted RBP	4.26	□□□□□ -1.73
SUP35	YDR172W	PET122	P10355	254 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	PET54	P10834	293 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	YCR102C	P25608	368 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	IMG1	P25626	169 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	SNC1	P31109	117 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	HYM1	P32464	399 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	MAL32	P38158	584 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	RRP4	P38792	359 aa	Known RBP	4.26	□□□□□ -1.73
SUP35	YDR172W	FET3	P38993	636 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	VPS52	P39904	641 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	ALK1	P43633	760 aa	Known RBP	4.26	□□□□□ -1.73
SUP35	YDR172W	ALB1	P47019	175 aa	Predicted RBP	4.26	□□□□□ -1.73
SUP35	YDR172W	TRM9	P49957	279 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	RNH70	P53331	553 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	MAL12	P53341	584 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	MPA43	P53583	542 aa	Predicted RBP	4.26	□□□□□ -1.73
SUP35	YDR172W	SNT309	Q06091	175 aa	Predicted RBP	4.26	□□□□□ -1.73
SUP35	YDR172W	SYO1	Q07395	620 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	YOR214C	Q12282	236 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	APC2	Q12440	853 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	SKM1	Q12469	655 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	ACC1	Q00955	2233 aa	Known RBP	4.26	□□□□□ -1.73
SUP35	YDR172W	SOD2	P00447	233 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	CAN1	P04817	590 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	ECT1	P33412	323 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	JEN1	P36035	616 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
SUP35	YDR172W	MRPL15	P36523	253 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	YBR238C	P38330	731 aa	Known RBP	4.26	□□□□□ -1.73
SUP35	YDR172W	YJR120W	P47157	116 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	PMT5	P52867	743 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	DOC1	P53068	250 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	YGR012W	P53206	393 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	TDA1	Q03533	586 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	MLC2	Q06580	163 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	HRT1	Q08273	121 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	BSC6	Q08280	497 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	YOR378W	Q08902	515 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	MDM32	Q12171	622 aa		4.26	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms