RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W ARL3Q02804 198 aa5.04□□□□□ -1.6
FOB1YDR110W DOT1Q04089 582 aaKnown RBP5.04□□□□□ -1.6
FOB1YDR110W YDR109CQ04585 715 aa5.04□□□□□ -1.6
FOB1YDR110W FRQ1Q06389 190 aa5.04□□□□□ -1.6
FOB1YDR110W MRI1Q06489 411 aaKnown RBP5.04□□□□□ -1.6
FOB1YDR110W MRX9Q07349 420 aaKnown RBP5.04□□□□□ -1.6
FOB1YDR110W LDS2Q08218 356 aa5.04□□□□□ -1.6
FOB1YDR110W FRE7Q12333 620 aa5.04□□□□□ -1.6
FOB1YDR110W DCN1Q12395 269 aa5.04□□□□□ -1.6
FOB1YDR110W AI5_ALPHAQ9ZZX1 630 aa5.04□□□□□ -1.6
FOB1YDR110W IDP1P21954 428 aaKnown RBP5.03□□□□□ -1.6
FOB1YDR110W NUP2P32499 720 aa5.03□□□□□ -1.6
FOB1YDR110W CYS4P32582 507 aaKnown RBP5.03□□□□□ -1.6
FOB1YDR110W SGE1P33335 543 aa5.03□□□□□ -1.6
FOB1YDR110W YKR041WP36134 250 aa5.03□□□□□ -1.6
FOB1YDR110W TVP38P36164 337 aa5.03□□□□□ -1.6
FOB1YDR110W RPL32P38061 130 aaKnown RBP5.03□□□□□ -1.6
FOB1YDR110W RCK2P38623 610 aa5.03□□□□□ -1.6
FOB1YDR110W PRE3P38624 215 aa5.03□□□□□ -1.6
FOB1YDR110W YER076CP40049 302 aa5.03□□□□□ -1.6
FOB1YDR110W DDI1P40087 428 aa5.03□□□□□ -1.6
FOB1YDR110W GUF1P46943 645 aa5.03□□□□□ -1.6
FOB1YDR110W YJR079WP47126 109 aa5.03□□□□□ -1.6
FOB1YDR110W MKC7P53379 596 aa5.03□□□□□ -1.6
FOB1YDR110W ASI2P53895 289 aa5.03□□□□□ -1.6
FOB1YDR110W NAM8Q00539 523 aaKnown RBP5.03□□□□□ -1.6
FOB1YDR110W HER2Q03557 464 aa5.03□□□□□ -1.6
FOB1YDR110W AIM34Q03673 198 aa5.03□□□□□ -1.6
FOB1YDR110W NUP53Q03790 475 aa5.03□□□□□ -1.6
FOB1YDR110W TPP1Q03796 238 aa5.03□□□□□ -1.6
FOB1YDR110W YDR132CQ03900 495 aa5.03□□□□□ -1.6
FOB1YDR110W VBA1Q04301 562 aa5.03□□□□□ -1.6
FOB1YDR110W NAT4Q04751 285 aa5.03□□□□□ -1.6
FOB1YDR110W YMR315WQ04869 349 aaKnown RBP5.03□□□□□ -1.6
FOB1YDR110W GRX8Q05926 109 aa5.03□□□□□ -1.6
FOB1YDR110W ARC18Q05933 178 aaKnown RBP5.03□□□□□ -1.6
FOB1YDR110W ELG1Q12050 791 aa5.03□□□□□ -1.6
FOB1YDR110W MLH3Q12083 715 aa5.03□□□□□ -1.6
FOB1YDR110W SLM3Q12093 417 aa5.03□□□□□ -1.6
FOB1YDR110W FYV7Q12247 151 aa5.03□□□□□ -1.6
FOB1YDR110W RGT2Q12300 763 aa5.03□□□□□ -1.6
FOB1YDR110W URB1P34241 1764 aaKnown RBP5.03□□□□□ -1.6
FOB1YDR110W RPL28P02406 149 aaKnown RBP5.03□□□□□ -1.6
FOB1YDR110W CBP6P07253 162 aaPredicted RBP5.03□□□□□ -1.6
FOB1YDR110W VMA5P31412 392 aaKnown RBP5.03□□□□□ -1.6
FOB1YDR110W SPS18P32572 300 aa5.03□□□□□ -1.6
FOB1YDR110W GDA1P32621 518 aa5.03□□□□□ -1.6
FOB1YDR110W SOF1P33750 489 aaKnown RBP5.03□□□□□ -1.6
FOB1YDR110W MRPS5P33759 307 aa5.03□□□□□ -1.6
FOB1YDR110W YKL187CP34231 750 aa5.03□□□□□ -1.6
FOB1YDR110W LYS12P40495 371 aaKnown RBP5.03□□□□□ -1.6
FOB1YDR110W SYG1P40528 902 aa5.03□□□□□ -1.6
FOB1YDR110W TRS85P46944 698 aa5.03□□□□□ -1.6
FOB1YDR110W MIC26P50087 233 aa5.03□□□□□ -1.6
FOB1YDR110W MMS2P53152 137 aa5.03□□□□□ -1.6
FOB1YDR110W PEX31P53203 462 aa5.03□□□□□ -1.6
FOB1YDR110W COS6P53344 381 aa5.03□□□□□ -1.6
FOB1YDR110W MSS11Q03825 758 aa5.03□□□□□ -1.6
FOB1YDR110W SSK1Q07084 712 aa5.03□□□□□ -1.6
FOB1YDR110W YRF1-3P0CX14 1859 aa5.02□□□□□ -1.61
FOB1YDR110W YRF1-7P0CX15 1859 aa5.02□□□□□ -1.61
FOB1YDR110W YRF1-6P53819 1859 aa5.02□□□□□ -1.61
FOB1YDR110W CTA1P15202 515 aa5.02□□□□□ -1.61
FOB1YDR110W DCC1P25559 380 aa5.02□□□□□ -1.61
FOB1YDR110W RAD5P32849 1169 aaPredicted RBP5.02□□□□□ -1.61
FOB1YDR110W SWD2P36104 329 aaPredicted RBP5.02□□□□□ -1.61
FOB1YDR110W FMP23P38231 175 aa5.02□□□□□ -1.61
FOB1YDR110W GRE3P38715 327 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
FOB1YDR110W DHH1P39517 506 aaKnown RBP5.02□□□□□ -1.61
FOB1YDR110W UBP5P39944 805 aa5.02□□□□□ -1.61
FOB1YDR110W SMB1P40018 196 aaKnown RBP5.02□□□□□ -1.61
FOB1YDR110W RGI1P40043 161 aaPredicted RBP5.02□□□□□ -1.61
FOB1YDR110W SAS2P40963 338 aa5.02□□□□□ -1.61
FOB1YDR110W POP1P41812 875 aa5.02□□□□□ -1.61
FOB1YDR110W YJR011CP47086 261 aaPredicted RBP5.02□□□□□ -1.61
FOB1YDR110W TOS2P50078 622 aa5.02□□□□□ -1.61
FOB1YDR110W GAS2Q06135 555 aa5.02□□□□□ -1.61
FOB1YDR110W NOC4Q06512 552 aaPredicted RBP5.02□□□□□ -1.61
FOB1YDR110W RPS10AQ08745 105 aaPredicted RBP5.02□□□□□ -1.61
FOB1YDR110W YDR018CQ12185 396 aa5.02□□□□□ -1.61
FOB1YDR110W RDI1Q12434 202 aa5.02□□□□□ -1.61
FOB1YDR110W YER175W-AQ8TGU4 54 aa5.02□□□□□ -1.61
FOB1YDR110W RIB3Q99258 208 aa5.02□□□□□ -1.61
FOB1YDR110W YIL177CP40434 1758 aa5.02□□□□□ -1.61
FOB1YDR110W YJL225CP40889 1758 aa5.02□□□□□ -1.61
FOB1YDR110W YOR304C-AO14468 76 aa5.01□□□□□ -1.61
FOB1YDR110W AMD1P15274 810 aaKnown RBP5.01□□□□□ -1.61
FOB1YDR110W PET9P18239 318 aaKnown RBP5.01□□□□□ -1.61
FOB1YDR110W PMT2P31382 759 aa5.01□□□□□ -1.61
FOB1YDR110W NTF2P33331 125 aaKnown RBP5.01□□□□□ -1.61
FOB1YDR110W SKN1P33336 771 aa5.01□□□□□ -1.61
FOB1YDR110W SCO2P38072 301 aa5.01□□□□□ -1.61
FOB1YDR110W TRM7P38238 310 aaKnown RBP5.01□□□□□ -1.61
FOB1YDR110W YBR137WP38276 179 aa5.01□□□□□ -1.61
FOB1YDR110W SDH8P38345 138 aa5.01□□□□□ -1.61
FOB1YDR110W CIN4P39110 191 aa5.01□□□□□ -1.61
FOB1YDR110W YJR030CP47101 745 aa5.01□□□□□ -1.61
FOB1YDR110W UBC11P52492 156 aa5.01□□□□□ -1.61
FOB1YDR110W YOR283WQ12040 230 aaKnown RBP5.01□□□□□ -1.61
FOB1YDR110W APC9Q12107 265 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms