RNA–Protein interactions for RNA: YDR034C-C

YDR034C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR034C-C, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-CYDR034C-C YPL278CQ08990 100 aa2.55□□□□□ -2
YDR034C-CYDR034C-C DCP1Q12517 231 aaPredicted RBP2.55□□□□□ -2
YDR034C-CYDR034C-C CDC37P06101 506 aaKnown RBP2.54□□□□□ -2
YDR034C-CYDR034C-C CDC42P19073 191 aa2.54□□□□□ -2
YDR034C-CYDR034C-C RPL16BP26785 198 aaKnown RBP2.54□□□□□ -2
YDR034C-CYDR034C-C CDC13P32797 924 aaKnown RBP2.54□□□□□ -2
YDR034C-CYDR034C-C END3P39013 349 aa2.54□□□□□ -2
YDR034C-CYDR034C-C UFD1P53044 361 aa2.54□□□□□ -2
YDR034C-CYDR034C-C OKP1P53298 406 aa2.54□□□□□ -2
YDR034C-CYDR034C-C CAB5Q03941 241 aa2.54□□□□□ -2
YDR034C-CYDR034C-C YOL163WP0CF20 169 aa2.53□□□□□ -2
YDR034C-CYDR034C-C MCH2P36032 473 aa2.53□□□□□ -2
YDR034C-CYDR034C-C YKL162CP36052 402 aa2.53□□□□□ -2
YDR034C-CYDR034C-C CAJ1P39101 391 aa2.53□□□□□ -2
YDR034C-CYDR034C-C YIL012WP40551 113 aa2.53□□□□□ -2
YDR034C-CYDR034C-C SWC4P53201 476 aa2.53□□□□□ -2
YDR034C-CYDR034C-C MIX17Q03667 156 aa2.53□□□□□ -2
YDR034C-CYDR034C-C YDR286CQ05530 114 aa2.53□□□□□ -2
YDR034C-CYDR034C-C YLR297WQ05899 129 aa2.53□□□□□ -2
YDR034C-CYDR034C-C STE23Q06010 1027 aa2.53□□□□□ -2
YDR034C-CYDR034C-C YLR446WQ06204 433 aa2.53□□□□□ -2
YDR034C-CYDR034C-C PBP4Q07362 185 aaKnown RBP2.53□□□□□ -2
YDR034C-CYDR034C-C IZH4Q99393 312 aa2.53□□□□□ -2
YDR034C-CYDR034C-C TRX1P22217 103 aaKnown RBP2.52□□□□□ -2.01
YDR034C-CYDR034C-C PRE7P23724 241 aaKnown RBP2.52□□□□□ -2.01
YDR034C-CYDR034C-C RSA4P25382 515 aaKnown RBP2.52□□□□□ -2.01
YDR034C-CYDR034C-C GPX1P36014 167 aa2.52□□□□□ -2.01
YDR034C-CYDR034C-C AIM20P40451 204 aa2.52□□□□□ -2.01
YDR034C-CYDR034C-C YFL064CP43540 174 aa2.52□□□□□ -2.01
YDR034C-CYDR034C-C LIF1P53150 421 aa2.52□□□□□ -2.01
YDR034C-CYDR034C-C RRP42Q12277 265 aaPredicted RBP2.52□□□□□ -2.01
YDR034C-CYDR034C-C PFK27Q12471 397 aaPredicted RBP2.52□□□□□ -2.01
YDR034C-CYDR034C-C VMA2P16140 517 aaKnown RBP2.51□□□□□ -2.01
YDR034C-CYDR034C-C IMP1P28627 190 aa2.51□□□□□ -2.01
YDR034C-CYDR034C-C GCG1P32656 232 aaKnown RBP2.51□□□□□ -2.01
YDR034C-CYDR034C-C PRP24P49960 444 aaKnown RBP2.51□□□□□ -2.01
YDR034C-CYDR034C-C RSM27P53305 110 aa2.51□□□□□ -2.01
YDR034C-CYDR034C-C CDD1Q06549 142 aa2.51□□□□□ -2.01
YDR034C-CYDR034C-C CLP1Q08685 445 aaPredicted RBP2.51□□□□□ -2.01
YDR034C-CYDR034C-C PGC1Q08959 321 aa2.51□□□□□ -2.01
YDR034C-CYDR034C-C KRE1P17260 313 aa2.5□□□□□ -2.01
YDR034C-CYDR034C-C TPO5P36029 618 aa2.5□□□□□ -2.01
YDR034C-CYDR034C-C SWC5P38326 303 aa2.5□□□□□ -2.01
YDR034C-CYDR034C-C YHL044WP38727 235 aa2.5□□□□□ -2.01
YDR034C-CYDR034C-C SSO2P39926 295 aa2.5□□□□□ -2.01
YDR034C-CYDR034C-C KRE29P40026 464 aa2.5□□□□□ -2.01
YDR034C-CYDR034C-C PEX30Q06169 523 aa2.5□□□□□ -2.01
YDR034C-CYDR034C-C TDH2P00358 332 aaKnown RBP2.49□□□□□ -2.01
YDR034C-CYDR034C-C PET18P25362 215 aa2.49□□□□□ -2.01
YDR034C-CYDR034C-C MRPL3P36516 390 aa2.49□□□□□ -2.01
YDR034C-CYDR034C-C FET3P38993 636 aa2.49□□□□□ -2.01
YDR034C-CYDR034C-C NNT1Q05874 261 aa2.49□□□□□ -2.01
YDR034C-CYDR034C-C FEX1Q08913 375 aa2.49□□□□□ -2.01
YDR034C-CYDR034C-C FEX2Q08991 375 aa2.49□□□□□ -2.01
YDR034C-CYDR034C-C RAD7P06779 565 aa2.48□□□□□ -2.01
YDR034C-CYDR034C-C YPC1P38298 316 aa2.48□□□□□ -2.01
YDR034C-CYDR034C-C UBC13P52490 153 aa2.48□□□□□ -2.01
YDR034C-CYDR034C-C PAA1Q12447 191 aaKnown RBP2.48□□□□□ -2.01
YDR034C-CYDR034C-C YAL063C-AQ3E791 96 aa2.48□□□□□ -2.01
YDR034C-CYDR034C-C OPI1P21957 404 aa2.47□□□□□ -2.01
YDR034C-CYDR034C-C YBR062CP38239 180 aa2.47□□□□□ -2.01
YDR034C-CYDR034C-C YER084WP40057 128 aa2.47□□□□□ -2.01
YDR034C-CYDR034C-C SYF2P53277 215 aaPredicted RBP2.47□□□□□ -2.01
YDR034C-CYDR034C-C RGM1Q00453 211 aa2.47□□□□□ -2.01
YDR034C-CYDR034C-C MGR3Q04472 501 aa2.47□□□□□ -2.01
YDR034C-CYDR034C-C APC9Q12107 265 aa2.47□□□□□ -2.01
YDR034C-CYDR034C-C YPR064WQ12492 139 aa2.47□□□□□ -2.01
YDR034C-CYDR034C-C CAR2P07991 424 aaKnown RBP2.46□□□□□ -2.02
YDR034C-CYDR034C-C RPL31AP0C2H8 113 aaKnown RBP2.46□□□□□ -2.02
YDR034C-CYDR034C-C IMP3P32899 183 aaPredicted RBP2.46□□□□□ -2.02
YDR034C-CYDR034C-C CAB3P36076 571 aa2.46□□□□□ -2.02
YDR034C-CYDR034C-C SWD2P36104 329 aaPredicted RBP2.46□□□□□ -2.02
YDR034C-CYDR034C-C AVT6P40074 448 aa2.46□□□□□ -2.02
YDR034C-CYDR034C-C SYS1P41544 203 aa2.46□□□□□ -2.02
YDR034C-CYDR034C-C COX16P47081 118 aa2.46□□□□□ -2.02
YDR034C-CYDR034C-C MIG2P53035 382 aa2.46□□□□□ -2.02
YDR034C-CYDR034C-C OSH6Q02201 448 aa2.46□□□□□ -2.02
YDR034C-CYDR034C-C VPS20Q04272 221 aa2.46□□□□□ -2.02
YDR034C-CYDR034C-C TIM22Q12328 207 aa2.46□□□□□ -2.02
YDR034C-CYDR034C-C MSS116P15424 664 aaKnown RBP2.45□□□□□ -2.02
YDR034C-CYDR034C-C PHO80P20052 293 aa2.45□□□□□ -2.02
YDR034C-CYDR034C-C YCR025CP25352 136 aa2.45□□□□□ -2.02
YDR034C-CYDR034C-C RPL5P26321 297 aaKnown RBP2.45□□□□□ -2.02
YDR034C-CYDR034C-C VAB2P40003 282 aa2.45□□□□□ -2.02
YDR034C-CYDR034C-C VOA1P53262 265 aa2.45□□□□□ -2.02
YDR034C-CYDR034C-C ALG9P53868 555 aaKnown RBP2.45□□□□□ -2.02
YDR034C-CYDR034C-C YMR111CQ04461 462 aaPredicted RBP2.45□□□□□ -2.02
YDR034C-CYDR034C-C TPM1P17536 199 aaKnown RBP2.44□□□□□ -2.02
YDR034C-CYDR034C-C MBA1P38300 278 aa2.44□□□□□ -2.02
YDR034C-CYDR034C-C LOH1P47055 219 aa2.44□□□□□ -2.02
YDR034C-CYDR034C-C RIB4P50861 169 aaPredicted RBP2.44□□□□□ -2.02
YDR034C-CYDR034C-C YNL095CP53932 642 aa2.44□□□□□ -2.02
YDR034C-CYDR034C-C YDL144CQ07589 356 aa2.44□□□□□ -2.02
YDR034C-CYDR034C-C SIA1Q12212 622 aa2.44□□□□□ -2.02
YDR034C-CYDR034C-C SAR1P20606 190 aaKnown RBP2.43□□□□□ -2.02
YDR034C-CYDR034C-C OSM1P21375 501 aaKnown RBP2.43□□□□□ -2.02
YDR034C-CYDR034C-C ATG12P38316 186 aa2.43□□□□□ -2.02
YDR034C-CYDR034C-C YER188WP40103 239 aa2.43□□□□□ -2.02
YDR034C-CYDR034C-C GDS1P41913 522 aa2.43□□□□□ -2.02
YDR034C-CYDR034C-C COG7P53195 279 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms