RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	COX2	P00410	251 aa		4.41	□□□□□ -1.7
RPN5	YDL147W	HIS1	P00498	297 aa	Known RBP	4.41	□□□□□ -1.7
RPN5	YDL147W	MSF1	P08425	469 aa		4.41	□□□□□ -1.7
RPN5	YDL147W	TAE1	P38340	232 aa		4.41	□□□□□ -1.7
RPN5	YDL147W	BNA6	P43619	295 aa		4.41	□□□□□ -1.7
RPN5	YDL147W	SDS23	P53172	527 aa		4.41	□□□□□ -1.7
RPN5	YDL147W	YNR066C	P53752	436 aa		4.41	□□□□□ -1.7
RPN5	YDL147W	YNL134C	P53912	376 aa	Known RBP	4.41	□□□□□ -1.7
RPN5	YDL147W	RNH1	Q04740	348 aa		4.41	□□□□□ -1.7
RPN5	YDL147W	CTS2	Q06350	511 aa		4.41	□□□□□ -1.7
RPN5	YDL147W	YOR376W	Q08900	122 aa		4.41	□□□□□ -1.7
RPN5	YDL147W	VIK1	Q12045	647 aa		4.41	□□□□□ -1.7
RPN5	YDL147W	RAD3	P06839	778 aa		4.4	□□□□□ -1.71
RPN5	YDL147W	SPT4	P32914	102 aa	Predicted RBP	4.4	□□□□□ -1.71
RPN5	YDL147W	CSE1	P33307	960 aa		4.4	□□□□□ -1.71
RPN5	YDL147W	YKL187C	P34231	750 aa		4.4	□□□□□ -1.71
RPN5	YDL147W	YHR045W	P38775	560 aa		4.4	□□□□□ -1.71
RPN5	YDL147W	GGC1	P38988	300 aa		4.4	□□□□□ -1.71
RPN5	YDL147W	YAR1	P46683	200 aa		4.4	□□□□□ -1.71
RPN5	YDL147W	TAD2	P47058	250 aa		4.4	□□□□□ -1.71
RPN5	YDL147W	YPT32	P51996	222 aa	Known RBP	4.4	□□□□□ -1.71
RPN5	YDL147W	VEL1	P53058	206 aa		4.4	□□□□□ -1.71
RPN5	YDL147W	YGL039W	P53183	348 aa	Known RBP	4.4	□□□□□ -1.71
RPN5	YDL147W	TIM11	P81449	96 aa	Predicted RBP	4.4	□□□□□ -1.71
RPN5	YDL147W	VBA1	Q04301	562 aa		4.4	□□□□□ -1.71
RPN5	YDL147W	ADH6	Q04894	360 aa	Known RBP	4.4	□□□□□ -1.71
RPN5	YDL147W	PEX30	Q06169	523 aa		4.4	□□□□□ -1.71
RPN5	YDL147W	PER33	Q12144	273 aa		4.4	□□□□□ -1.71
RPN5	YDL147W	RUD3	Q12234	484 aa	Known RBP	4.4	□□□□□ -1.71
RPN5	YDL147W	EPT1	P22140	391 aa		4.39	□□□□□ -1.71
RPN5	YDL147W	HSM3	P38348	480 aa		4.39	□□□□□ -1.71
RPN5	YDL147W	COA1	P40452	197 aa		4.39	□□□□□ -1.71
RPN5	YDL147W	TIS11	P47977	285 aa		4.39	□□□□□ -1.71
RPN5	YDL147W	INP2	Q03824	705 aa		4.39	□□□□□ -1.71
RPN5	YDL147W	TAZ1	Q06510	381 aa		4.39	□□□□□ -1.71
RPN5	YDL147W	MCH1	Q07376	486 aa		4.39	□□□□□ -1.71
RPN5	YDL147W	TMC1	Q08422	150 aa	Predicted RBP	4.39	□□□□□ -1.71
RPN5	YDL147W	TY3A-G	Q12173	290 aa		4.39	□□□□□ -1.71
RPN5	YDL147W	TY3A-I	Q99219	290 aa		4.39	□□□□□ -1.71
RPN5	YDL147W	CWP1	P28319	239 aa		4.38	□□□□□ -1.71
RPN5	YDL147W	SPS19	P32573	292 aa	Known RBP	4.38	□□□□□ -1.71
RPN5	YDL147W	YPS5	P53057	165 aa		4.38	□□□□□ -1.71
RPN5	YDL147W	TAF9	Q05027	157 aa		4.38	□□□□□ -1.71
RPN5	YDL147W	DPP1	Q05521	289 aa		4.38	□□□□□ -1.71
RPN5	YDL147W	BSC6	Q08280	497 aa		4.38	□□□□□ -1.71
RPN5	YDL147W	RRT12	P25381	491 aa		4.37	□□□□□ -1.71
RPN5	YDL147W	CDC13	P32797	924 aa	Known RBP	4.37	□□□□□ -1.71
RPN5	YDL147W	RFT1	P38206	574 aa	Predicted RBP	4.37	□□□□□ -1.71
RPN5	YDL147W	SDS24	P38314	527 aa		4.37	□□□□□ -1.71
RPN5	YDL147W	PRE5	P40302	234 aa	Known RBP	4.37	□□□□□ -1.71
RPN5	YDL147W	FMC1	P40491	155 aa		4.37	□□□□□ -1.71
RPN5	YDL147W	YGL262W	P53054	175 aa		4.37	□□□□□ -1.71
RPN5	YDL147W	MRPS16	Q02608	121 aa		4.37	□□□□□ -1.71
RPN5	YDL147W	PET117	Q02771	107 aa		4.37	□□□□□ -1.71
RPN5	YDL147W	MIM1	Q08176	113 aa		4.37	□□□□□ -1.71
RPN5	YDL147W	YOR292C	Q08743	309 aa		4.37	□□□□□ -1.71
RPN5	YDL147W	CYM1	P32898	989 aa		4.36	□□□□□ -1.71
RPN5	YDL147W	MRPL6	P32904	214 aa		4.36	□□□□□ -1.71
RPN5	YDL147W	VAB2	P40003	282 aa		4.36	□□□□□ -1.71
RPN5	YDL147W	ALD5	P40047	520 aa	Known RBP	4.36	□□□□□ -1.71
RPN5	YDL147W	DDI1	P40087	428 aa		4.36	□□□□□ -1.71
RPN5	YDL147W	FMP48	P53233	369 aa		4.36	□□□□□ -1.71
RPN5	YDL147W	TPS1	Q00764	495 aa	Known RBP	4.36	□□□□□ -1.71
RPN5	YDL147W	HAL1	Q01766	294 aa		4.36	□□□□□ -1.71
RPN5	YDL147W	OST6	Q03723	332 aa		4.36	□□□□□ -1.71
RPN5	YDL147W	API2	Q04413	109 aa		4.36	□□□□□ -1.71
RPN5	YDL147W	BOP2	Q06150	570 aa		4.36	□□□□□ -1.71
RPN5	YDL147W	SFH1	Q06168	426 aa		4.36	□□□□□ -1.71
RPN5	YDL147W	ARV1	Q06541	321 aa		4.36	□□□□□ -1.71
RPN5	YDL147W	MHR1	Q06630	226 aa		4.36	□□□□□ -1.71
RPN5	YDL147W	CTR3	Q06686	241 aa		4.36	□□□□□ -1.71
RPN5	YDL147W	PSK1	P31374	1356 aa		4.35	□□□□□ -1.71
RPN5	YDL147W	SUA5	P32579	426 aa		4.35	□□□□□ -1.71
RPN5	YDL147W	ECM34	P38728	170 aa		4.35	□□□□□ -1.71
RPN5	YDL147W	PEX31	P53203	462 aa		4.35	□□□□□ -1.71
RPN5	YDL147W	MRPL50	P53724	139 aa		4.35	□□□□□ -1.71
RPN5	YDL147W	YLR152C	P54072	576 aa		4.35	□□□□□ -1.71
RPN5	YDL147W	SRL4	Q03085	281 aa		4.35	□□□□□ -1.71
RPN5	YDL147W	YBL111C	Q3E7Y5	667 aa		4.35	□□□□□ -1.71
RPN5	YDL147W	POF1	P25576	258 aa		4.34	□□□□□ -1.71
RPN5	YDL147W	AEP1	P32493	518 aa		4.34	□□□□□ -1.71
RPN5	YDL147W	SMP1	P38128	452 aa		4.34	□□□□□ -1.71
RPN5	YDL147W	BIG1	P38813	335 aa		4.34	□□□□□ -1.71
RPN5	YDL147W	NPT1	P39683	429 aa	Known RBP	4.34	□□□□□ -1.71
RPN5	YDL147W	RPL10	P41805	221 aa	Known RBP	4.34	□□□□□ -1.71
RPN5	YDL147W	COG7	P53195	279 aa		4.34	□□□□□ -1.71
RPN5	YDL147W	INP1	Q03694	420 aa		4.34	□□□□□ -1.71
RPN5	YDL147W	VHS1	Q03785	461 aa		4.34	□□□□□ -1.71
RPN5	YDL147W	SEC13	Q04491	297 aa	Known RBP	4.34	□□□□□ -1.71
RPN5	YDL147W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
RPN5	YDL147W	DAL81	P21657	970 aa		4.33	□□□□□ -1.72
RPN5	YDL147W	PCL1	P24867	279 aa		4.33	□□□□□ -1.72
RPN5	YDL147W	SRB4	P32569	687 aa		4.33	□□□□□ -1.72
RPN5	YDL147W	TIP20	P33891	701 aa		4.33	□□□□□ -1.72
RPN5	YDL147W	PRS4	P38063	326 aa	Predicted RBP	4.33	□□□□□ -1.72
RPN5	YDL147W	TCD1	P38756	429 aa		4.33	□□□□□ -1.72
RPN5	YDL147W	SHC1	P39000	512 aa		4.33	□□□□□ -1.72
RPN5	YDL147W	TIM21	P53220	239 aa		4.33	□□□□□ -1.72
RPN5	YDL147W	TRM44	Q02648	567 aa	Known RBP	4.33	□□□□□ -1.72
RPN5	YDL147W	YML018C	Q03730	393 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms