RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeastyeast

Gene PBP4, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP4YDL053C MCH2P36032 473 aa2.05□□□□□ -2.08
PBP4YDL053C SDH4P37298 181 aa2.05□□□□□ -2.08
PBP4YDL053C SMC2P38989 1170 aaKnown RBP2.05□□□□□ -2.08
PBP4YDL053C YFR045WP43617 309 aa2.05□□□□□ -2.08
PBP4YDL053C ABZ2Q03266 374 aa2.05□□□□□ -2.08
PBP4YDL053C YLR446WQ06204 433 aa2.05□□□□□ -2.08
PBP4YDL053C IES3Q12345 250 aa2.05□□□□□ -2.08
PBP4YDL053C DCP1Q12517 231 aaPredicted RBP2.05□□□□□ -2.08
PBP4YDL053C PRE7P23724 241 aaKnown RBP2.04□□□□□ -2.08
PBP4YDL053C VPH2P32341 215 aa2.04□□□□□ -2.08
PBP4YDL053C AIM29P36154 155 aa2.04□□□□□ -2.08
PBP4YDL053C YPC1P38298 316 aa2.04□□□□□ -2.08
PBP4YDL053C UFD1P53044 361 aa2.04□□□□□ -2.08
PBP4YDL053C YGR266WP53326 701 aa2.04□□□□□ -2.08
PBP4YDL053C YMR111CQ04461 462 aaPredicted RBP2.04□□□□□ -2.08
PBP4YDL053C PBP4Q07362 185 aaKnown RBP2.04□□□□□ -2.08
PBP4YDL053C RPL16BP26785 198 aaKnown RBP2.03□□□□□ -2.08
PBP4YDL053C ALK2P32789 676 aaPredicted RBP2.03□□□□□ -2.08
PBP4YDL053C CDC13P32797 924 aaKnown RBP2.03□□□□□ -2.08
PBP4YDL053C MRPL6P32904 214 aa2.03□□□□□ -2.08
PBP4YDL053C ECO1P43605 281 aa2.03□□□□□ -2.08
PBP4YDL053C BUD13P46947 266 aaPredicted RBP2.03□□□□□ -2.08
PBP4YDL053C HSH155P49955 971 aaKnown RBP2.03□□□□□ -2.08
PBP4YDL053C RIB4P50861 169 aaPredicted RBP2.03□□□□□ -2.08
PBP4YDL053C UBC13P52490 153 aa2.03□□□□□ -2.08
PBP4YDL053C DBP6P53734 629 aaKnown RBP2.03□□□□□ -2.08
PBP4YDL053C YPL113CQ02961 396 aa2.03□□□□□ -2.08
PBP4YDL053C YPL278CQ08990 100 aa2.03□□□□□ -2.08
PBP4YDL053C APC9Q12107 265 aa2.03□□□□□ -2.08
PBP4YDL053C PFK27Q12471 397 aaPredicted RBP2.03□□□□□ -2.08
PBP4YDL053C YAL063C-AQ3E791 96 aa2.03□□□□□ -2.08
PBP4YDL053C CAR2P07991 424 aaKnown RBP2.02□□□□□ -2.09
PBP4YDL053C IFM1P25038 676 aa2.02□□□□□ -2.09
PBP4YDL053C YCR025CP25352 136 aa2.02□□□□□ -2.09
PBP4YDL053C TPO5P36029 618 aa2.02□□□□□ -2.09
PBP4YDL053C PES4P39684 611 aa2.02□□□□□ -2.09
PBP4YDL053C YIL012WP40551 113 aa2.02□□□□□ -2.09
PBP4YDL053C SWC4P53201 476 aa2.02□□□□□ -2.09
PBP4YDL053C BIO4P53630 237 aa2.02□□□□□ -2.09
PBP4YDL053C YDR114CQ04597 100 aa2.02□□□□□ -2.09
PBP4YDL053C ARC18Q05933 178 aaKnown RBP2.02□□□□□ -2.09
PBP4YDL053C REX3Q12090 404 aa2.02□□□□□ -2.09
PBP4YDL053C RTC5Q12108 567 aaKnown RBP2.02□□□□□ -2.09
PBP4YDL053C IZH4Q99393 312 aa2.02□□□□□ -2.09
PBP4YDL053C MET2P08465 486 aa2.01□□□□□ -2.09
PBP4YDL053C RPL31AP0C2H8 113 aaKnown RBP2.01□□□□□ -2.09
PBP4YDL053C KRR1P25586 316 aaPredicted RBP2.01□□□□□ -2.09
PBP4YDL053C MIG1P27705 504 aa2.01□□□□□ -2.09
PBP4YDL053C IMP3P32899 183 aaPredicted RBP2.01□□□□□ -2.09
PBP4YDL053C PPQ1P32945 549 aa2.01□□□□□ -2.09
PBP4YDL053C YHL044WP38727 235 aa2.01□□□□□ -2.09
PBP4YDL053C YDR089WP38966 869 aa2.01□□□□□ -2.09
PBP4YDL053C OSW5P40219 148 aa2.01□□□□□ -2.09
PBP4YDL053C CDC40P40968 455 aaPredicted RBP2.01□□□□□ -2.09
PBP4YDL053C GDS1P41913 522 aa2.01□□□□□ -2.09
PBP4YDL053C LIF1P53150 421 aa2.01□□□□□ -2.09
PBP4YDL053C YGL088WP53151 121 aa2.01□□□□□ -2.09
PBP4YDL053C GCD2P12754 651 aaPredicted RBP2□□□□□ -2.09
PBP4YDL053C YAK1P14680 807 aa2□□□□□ -2.09
PBP4YDL053C RPL5P26321 297 aaKnown RBP2□□□□□ -2.09
PBP4YDL053C SWD2P36104 329 aaPredicted RBP2□□□□□ -2.09
PBP4YDL053C POP2P39008 433 aa2□□□□□ -2.09
PBP4YDL053C VAB2P40003 282 aa2□□□□□ -2.09
PBP4YDL053C YFL064CP43540 174 aa2□□□□□ -2.09
PBP4YDL053C LOH1P47055 219 aa2□□□□□ -2.09
PBP4YDL053C COX16P47081 118 aa2□□□□□ -2.09
PBP4YDL053C OSH6Q02201 448 aa2□□□□□ -2.09
PBP4YDL053C CUR1Q06469 252 aa2□□□□□ -2.09
PBP4YDL053C RLP24Q07915 199 aaKnown RBP2□□□□□ -2.09
PBP4YDL053C MRX4Q12467 430 aa2□□□□□ -2.09
PBP4YDL053C TDH2P00358 332 aaKnown RBP1.99□□□□□ -2.09
PBP4YDL053C STF1P01098 86 aa1.99□□□□□ -2.09
PBP4YDL053C RAD7P06779 565 aa1.99□□□□□ -2.09
PBP4YDL053C YOL163WP0CF20 169 aa1.99□□□□□ -2.09
PBP4YDL053C KRE1P17260 313 aa1.99□□□□□ -2.09
PBP4YDL053C IMP1P28627 190 aa1.99□□□□□ -2.09
PBP4YDL053C UTR5P32630 166 aa1.99□□□□□ -2.09
PBP4YDL053C GCG1P32656 232 aaKnown RBP1.99□□□□□ -2.09
PBP4YDL053C MRPL3P36516 390 aa1.99□□□□□ -2.09
PBP4YDL053C YER084WP40057 128 aa1.99□□□□□ -2.09
PBP4YDL053C MPP10P47083 593 aaKnown RBP1.99□□□□□ -2.09
PBP4YDL053C PRP24P49960 444 aaKnown RBP1.99□□□□□ -2.09
PBP4YDL053C VOA1P53262 265 aa1.99□□□□□ -2.09
PBP4YDL053C RRG8Q06109 277 aa1.99□□□□□ -2.09
PBP4YDL053C TAZ1Q06510 381 aa1.99□□□□□ -2.09
PBP4YDL053C VAC14Q06708 880 aa1.99□□□□□ -2.09
PBP4YDL053C SIA1Q12212 622 aa1.99□□□□□ -2.09
PBP4YDL053C YPR064WQ12492 139 aa1.99□□□□□ -2.09
PBP4YDL053C MBA1P38300 278 aa1.98□□□□□ -2.09
PBP4YDL053C MNN9P39107 395 aaKnown RBP1.98□□□□□ -2.09
PBP4YDL053C KRE29P40026 464 aa1.98□□□□□ -2.09
PBP4YDL053C SYS1P41544 203 aa1.98□□□□□ -2.09
PBP4YDL053C PEX30Q06169 523 aa1.98□□□□□ -2.09
PBP4YDL053C FEX1Q08913 375 aa1.98□□□□□ -2.09
PBP4YDL053C FEX2Q08991 375 aa1.98□□□□□ -2.09
PBP4YDL053C RRP42Q12277 265 aaPredicted RBP1.98□□□□□ -2.09
PBP4YDL053C PHO80P20052 293 aa1.97□□□□□ -2.09
PBP4YDL053C SAR1P20606 190 aaKnown RBP1.97□□□□□ -2.09
PBP4YDL053C YBL081WP38180 368 aaKnown RBP1.97□□□□□ -2.09
PBP4YDL053C MIX17Q03667 156 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms