RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA1	YCR097W	GAL7	P08431	366 aa		0.37	□□□□□ -2.35
HMRA1	YCR097W	GYL1	Q04322	720 aa		0.37	□□□□□ -2.35
HMRA1	YCR097W	CDC7	P06243	507 aa		0.36	□□□□□ -2.35
HMRA1	YCR097W	MYO3	P36006	1272 aa		0.36	□□□□□ -2.35
HMRA1	YCR097W	SUR2	P38992	349 aa		0.36	□□□□□ -2.35
HMRA1	YCR097W	YIL012W	P40551	113 aa		0.36	□□□□□ -2.35
HMRA1	YCR097W	RPL10	P41805	221 aa	Known RBP	0.36	□□□□□ -2.35
HMRA1	YCR097W	YHC3	P47040	408 aa		0.36	□□□□□ -2.35
HMRA1	YCR097W	CAB4	P53332	305 aa		0.36	□□□□□ -2.35
HMRA1	YCR097W	YOL019W	Q08157	551 aa		0.36	□□□□□ -2.35
HMRA1	YCR097W	YPL278C	Q08990	100 aa		0.36	□□□□□ -2.35
HMRA1	YCR097W	SGA1	P08019	549 aa		0.35	□□□□□ -2.35
HMRA1	YCR097W	DOA4	P32571	926 aa		0.35	□□□□□ -2.35
HMRA1	YCR097W	YHL026C	P38740	315 aa		0.35	□□□□□ -2.35
HMRA1	YCR097W	RPN12	P32496	274 aa		0.34	□□□□□ -2.36
HMRA1	YCR097W	GPX1	P36014	167 aa		0.34	□□□□□ -2.36
HMRA1	YCR097W	PEX32	P38292	413 aa		0.34	□□□□□ -2.36
HMRA1	YCR097W	YDR089W	P38966	869 aa		0.34	□□□□□ -2.36
HMRA1	YCR097W	YJL016W	P47072	561 aa		0.34	□□□□□ -2.36
HMRA1	YCR097W	PRP24	P49960	444 aa	Known RBP	0.33	□□□□□ -2.36
HMRA1	YCR097W	TPN1	P53099	579 aa		0.33	□□□□□ -2.36
HMRA1	YCR097W	YFH1	Q07540	174 aa		0.33	□□□□□ -2.36
HMRA1	YCR097W	ATG5	Q12380	294 aa		0.33	□□□□□ -2.36
HMRA1	YCR097W	YKR045C	P36138	183 aa		0.32	□□□□□ -2.36
HMRA1	YCR097W	AVT6	P40074	448 aa		0.32	□□□□□ -2.36
HMRA1	YCR097W	GLE1	Q12315	538 aa		0.32	□□□□□ -2.36
HMRA1	YCR097W	MEI5	P32489	222 aa		0.31	□□□□□ -2.36
HMRA1	YCR097W	GCG1	P32656	232 aa	Known RBP	0.31	□□□□□ -2.36
HMRA1	YCR097W	PEP8	P40335	379 aa		0.31	□□□□□ -2.36
HMRA1	YCR097W	YLR012C	Q07927	99 aa		0.31	□□□□□ -2.36
HMRA1	YCR097W	MAS1	P10507	462 aa		0.3	□□□□□ -2.36
HMRA1	YCR097W	ERD1	P16151	362 aa		0.3	□□□□□ -2.36
HMRA1	YCR097W	YCR025C	P25352	136 aa		0.3	□□□□□ -2.36
HMRA1	YCR097W	EFM4	P40516	257 aa		0.3	□□□□□ -2.36
HMRA1	YCR097W	MZM1	Q03429	123 aa	Predicted RBP	0.3	□□□□□ -2.36
HMRA1	YCR097W	YDL144C	Q07589	356 aa		0.3	□□□□□ -2.36
HMRA1	YCR097W	PAN1	P32521	1480 aa		0.29	□□□□□ -2.36
HMRA1	YCR097W	UBR2	Q07963	1872 aa		0.29	□□□□□ -2.36
HMRA1	YCR097W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.29	□□□□□ -2.36	not detected
HMRA1	YCR097W	MRPL3	P36516	390 aa		0.29	□□□□□ -2.36
HMRA1	YCR097W	YMR134W	P40207	237 aa		0.29	□□□□□ -2.36
HMRA1	YCR097W	THR4	P16120	514 aa	Known RBP	0.28	□□□□□ -2.36
HMRA1	YCR097W	IMP1	P28627	190 aa		0.28	□□□□□ -2.36
HMRA1	YCR097W	KRE6	P32486	720 aa		0.28	□□□□□ -2.36
HMRA1	YCR097W	JNM1	P36224	373 aa		0.28	□□□□□ -2.36
HMRA1	YCR097W	YJL118W	P47022	219 aa		0.28	□□□□□ -2.36
HMRA1	YCR097W	YER188C-A	P0C0V2	99 aa		0.27	□□□□□ -2.37
HMRA1	YCR097W	HMX1	P32339	317 aa		0.27	□□□□□ -2.37
HMRA1	YCR097W	NUP157	P40064	1391 aa	Known RBP	0.27	□□□□□ -2.37
HMRA1	YCR097W	YBR062C	P38239	180 aa		0.26	□□□□□ -2.37
HMRA1	YCR097W	YHR122W	P38829	231 aa		0.26	□□□□□ -2.37
HMRA1	YCR097W	MLC1	P53141	149 aa		0.26	□□□□□ -2.37
HMRA1	YCR097W	TRM44	Q02648	567 aa	Known RBP	0.26	□□□□□ -2.37
HMRA1	YCR097W	YMR310C	Q04867	317 aa	Predicted RBP	0.26	□□□□□ -2.37
HMRA1	YCR097W	YLL007C	Q07799	665 aa		0.26	□□□□□ -2.37
HMRA1	YCR097W	LAG2	Q92325	660 aa		0.26	□□□□□ -2.37
HMRA1	YCR097W	HXT2	P23585	541 aa		0.25	□□□□□ -2.37
HMRA1	YCR097W	RBK1	P25332	333 aa		0.25	□□□□□ -2.37
HMRA1	YCR097W	RPL16B	P26785	198 aa	Known RBP	0.25	□□□□□ -2.37
HMRA1	YCR097W	CIN8	P27895	1000 aa		0.25	□□□□□ -2.37
HMRA1	YCR097W	SOP4	P39543	234 aa	Predicted RBP	0.25	□□□□□ -2.37
HMRA1	YCR097W	GLE2	P40066	365 aa		0.25	□□□□□ -2.37
HMRA1	YCR097W	YIL089W	P40500	205 aa		0.25	□□□□□ -2.37
HMRA1	YCR097W	SWT21	P53873	357 aa	Predicted RBP	0.25	□□□□□ -2.37
HMRA1	YCR097W	STE23	Q06010	1027 aa		0.25	□□□□□ -2.37
HMRA1	YCR097W	TOM40	P23644	387 aa	Known RBP	0.24	□□□□□ -2.37
HMRA1	YCR097W	CAT2	P32796	670 aa	Known RBP	0.24	□□□□□ -2.37
HMRA1	YCR097W	YGL114W	P53134	725 aa		0.24	□□□□□ -2.37
HMRA1	YCR097W	CAB5	Q03941	241 aa		0.24	□□□□□ -2.37
HMRA1	YCR097W	PUP2	P32379	260 aa		0.23	□□□□□ -2.37
HMRA1	YCR097W	SFC1	P33303	322 aa		0.23	□□□□□ -2.37
HMRA1	YCR097W	CIS3	P47001	227 aa		0.23	□□□□□ -2.37
HMRA1	YCR097W	PXR1	P53335	271 aa	Predicted RBP	0.23	□□□□□ -2.37
HMRA1	YCR097W	SPC19	Q03954	165 aa		0.23	□□□□□ -2.37
HMRA1	YCR097W	ISD11	Q6Q560	94 aa		0.23	□□□□□ -2.37
HMRA1	YCR097W	HSP82	P02829	709 aa	Known RBP	0.22	□□□□□ -2.37
HMRA1	YCR097W	RAD7	P06779	565 aa		0.22	□□□□□ -2.37
HMRA1	YCR097W	OSM1	P21375	501 aa	Known RBP	0.22	□□□□□ -2.37
HMRA1	YCR097W	KRE29	P40026	464 aa		0.22	□□□□□ -2.37
HMRA1	YCR097W	GON7	P46984	123 aa		0.22	□□□□□ -2.37
HMRA1	YCR097W	YNR068C	P53754	272 aa		0.22	□□□□□ -2.37
HMRA1	YCR097W	PUT1	P09368	476 aa		0.21	□□□□□ -2.38
HMRA1	YCR097W	TIF34	P40217	347 aa	Known RBP	0.21	□□□□□ -2.38
HMRA1	YCR097W	NOT5	Q12514	560 aa	Predicted RBP	0.21	□□□□□ -2.38
HMRA1	YCR097W	TAF6	P53040	516 aa		0.2	□□□□□ -2.38
HMRA1	YCR097W	DAD3	P69850	94 aa		0.2	□□□□□ -2.38
HMRA1	YCR097W	MRS2	Q01926	470 aa		0.2	□□□□□ -2.38
HMRA1	YCR097W	YLR446W	Q06204	433 aa		0.2	□□□□□ -2.38
HMRA1	YCR097W	FAA1	P30624	700 aa	Known RBP	0.19	□□□□□ -2.38
HMRA1	YCR097W	COG7	P53195	279 aa		0.19	□□□□□ -2.38
HMRA1	YCR097W	YMR114C	Q04471	368 aa	Known RBP	0.19	□□□□□ -2.38
HMRA1	YCR097W	RGS2	Q99188	309 aa		0.19	□□□□□ -2.38
HMRA1	YCR097W	YEL009C-A	A0A023PZF2	135 aa		0.18	□□□□□ -2.38
HMRA1	YCR097W	IFM1	P25038	676 aa		0.18	□□□□□ -2.38
HMRA1	YCR097W	YGL010W	P25338	174 aa		0.18	□□□□□ -2.38
HMRA1	YCR097W	SCM4	P32564	187 aa		0.18	□□□□□ -2.38
HMRA1	YCR097W	TPO5	P36029	618 aa		0.18	□□□□□ -2.38
HMRA1	YCR097W	BTT1	P40314	149 aa	Predicted RBP	0.18	□□□□□ -2.38
HMRA1	YCR097W	RPE1	P46969	238 aa		0.18	□□□□□ -2.38
HMRA1	YCR097W	YLL053C	P0CD98	152 aa		0.17	□□□□□ -2.38

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