RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B PRP24P49960 444 aaKnown RBP0.48□□□□□ -2.33
HTL1YCR020W-B PXR1P53335 271 aaPredicted RBP0.48□□□□□ -2.33
HTL1YCR020W-B COS6P53344 381 aa0.48□□□□□ -2.33
HTL1YCR020W-B SUB1P54000 292 aaKnown RBP0.48□□□□□ -2.33
HTL1YCR020W-B CTS2Q06350 511 aa0.48□□□□□ -2.33
HTL1YCR020W-B UBA1P22515 1024 aaKnown RBP0.47□□□□□ -2.33
HTL1YCR020W-B HXT2P23585 541 aa0.47□□□□□ -2.33
HTL1YCR020W-B RBK1P25332 333 aa0.47□□□□□ -2.33
HTL1YCR020W-B YCR025CP25352 136 aa0.47□□□□□ -2.33
HTL1YCR020W-B FAA1P30624 700 aaKnown RBP0.47□□□□□ -2.33
HTL1YCR020W-B CDC13P32797 924 aaKnown RBP0.47□□□□□ -2.33
HTL1YCR020W-B MDL1P33310 695 aa0.47□□□□□ -2.33
HTL1YCR020W-B YHR045WP38775 560 aa0.47□□□□□ -2.33
HTL1YCR020W-B SPL2P38839 148 aa0.47□□□□□ -2.33
HTL1YCR020W-B GDI1P39958 451 aaKnown RBP0.47□□□□□ -2.33
HTL1YCR020W-B YMR134WP40207 237 aa0.47□□□□□ -2.33
HTL1YCR020W-B YGR266WP53326 701 aa0.47□□□□□ -2.33
HTL1YCR020W-B SXM1Q04175 944 aaKnown RBP0.47□□□□□ -2.33
HTL1YCR020W-B EMC6Q12431 108 aa0.47□□□□□ -2.33
HTL1YCR020W-B AGC1Q12482 902 aa0.47□□□□□ -2.33
HTL1YCR020W-B TFB5Q3E7C1 72 aaPredicted RBP0.47□□□□□ -2.33
HTL1YCR020W-B LAG2Q92325 660 aa0.47□□□□□ -2.33
HTL1YCR020W-B RGS2Q99188 309 aa0.47□□□□□ -2.33
HTL1YCR020W-B RAD10P06838 210 aa0.46□□□□□ -2.34
HTL1YCR020W-B VMA8P32610 256 aaKnown RBP0.46□□□□□ -2.34
HTL1YCR020W-B YBR062CP38239 180 aa0.46□□□□□ -2.34
HTL1YCR020W-B YML6P51998 286 aa0.46□□□□□ -2.34
HTL1YCR020W-B TPN1P53099 579 aa0.46□□□□□ -2.34
HTL1YCR020W-B LIF1P53150 421 aa0.46□□□□□ -2.34
HTL1YCR020W-B UTP6Q02354 440 aaKnown RBP0.46□□□□□ -2.34
HTL1YCR020W-B TVP15Q03860 143 aa0.46□□□□□ -2.34
HTL1YCR020W-B YLR012CQ07927 99 aa0.46□□□□□ -2.34
HTL1YCR020W-B YPL247CQ12523 523 aa0.46□□□□□ -2.34
HTL1YCR020W-B PAN1P32521 1480 aa0.46□□□□□ -2.34
HTL1YCR020W-B NUP157P40064 1391 aaKnown RBP0.45□□□□□ -2.34
HTL1YCR020W-B PXA2P34230 853 aa0.45□□□□□ -2.34
HTL1YCR020W-B MRPL3P36516 390 aa0.45□□□□□ -2.34
HTL1YCR020W-B YHR122WP38829 231 aa0.45□□□□□ -2.34
HTL1YCR020W-B SOP4P39543 234 aaPredicted RBP0.45□□□□□ -2.34
HTL1YCR020W-B AVT6P40074 448 aa0.45□□□□□ -2.34
HTL1YCR020W-B BTT1P40314 149 aaPredicted RBP0.45□□□□□ -2.34
HTL1YCR020W-B TAF6P53040 516 aa0.45□□□□□ -2.34
HTL1YCR020W-B SWT21P53873 357 aaPredicted RBP0.45□□□□□ -2.34
HTL1YCR020W-B EBS1Q03466 884 aaKnown RBP0.45□□□□□ -2.34
HTL1YCR020W-B YCR102CP25608 368 aa0.44□□□□□ -2.34
HTL1YCR020W-B YOR062CP36025 268 aa0.44□□□□□ -2.34
HTL1YCR020W-B YSW1P38280 609 aa0.44□□□□□ -2.34
HTL1YCR020W-B ALP1P38971 573 aa0.44□□□□□ -2.34
HTL1YCR020W-B SUR2P38992 349 aa0.44□□□□□ -2.34
HTL1YCR020W-B PRP39P39682 629 aaKnown RBP0.44□□□□□ -2.34
HTL1YCR020W-B KRE29P40026 464 aa0.44□□□□□ -2.34
HTL1YCR020W-B RPL10P41805 221 aaKnown RBP0.44□□□□□ -2.34
HTL1YCR020W-B OST3P48439 350 aa0.44□□□□□ -2.34
HTL1YCR020W-B VPS9P54787 451 aa0.44□□□□□ -2.34
HTL1YCR020W-B MRS2Q01926 470 aa0.44□□□□□ -2.34
HTL1YCR020W-B FCF1Q05498 189 aaPredicted RBP0.44□□□□□ -2.34
HTL1YCR020W-B ATG5Q12380 294 aa0.44□□□□□ -2.34
HTL1YCR020W-B BOL1Q3E793 110 aa0.44□□□□□ -2.34
HTL1YCR020W-B GAL7P08431 366 aa0.43□□□□□ -2.34
HTL1YCR020W-B RDS1P25611 832 aa0.43□□□□□ -2.34
HTL1YCR020W-B VMA5P31412 392 aaKnown RBP0.43□□□□□ -2.34
HTL1YCR020W-B GDT1P38301 280 aaPredicted RBP0.43□□□□□ -2.34
HTL1YCR020W-B MND1P53102 219 aa0.43□□□□□ -2.34
HTL1YCR020W-B YGR016WP53209 190 aa0.43□□□□□ -2.34
HTL1YCR020W-B INM2Q05533 292 aa0.43□□□□□ -2.34
HTL1YCR020W-B BUR2Q05949 395 aa0.43□□□□□ -2.34
HTL1YCR020W-B YLL007CQ07799 665 aa0.43□□□□□ -2.34
HTL1YCR020W-B SPO24Q3E752 67 aa0.43□□□□□ -2.34
HTL1YCR020W-B STE3P06783 470 aa0.42□□□□□ -2.34
HTL1YCR020W-B RPL16BP26785 198 aaKnown RBP0.42□□□□□ -2.34
HTL1YCR020W-B GCG1P32656 232 aaKnown RBP0.42□□□□□ -2.34
HTL1YCR020W-B YIL089WP40500 205 aa0.42□□□□□ -2.34
HTL1YCR020W-B MRPL49P40858 161 aaPredicted RBP0.42□□□□□ -2.34
HTL1YCR020W-B RPE1P46969 238 aa0.42□□□□□ -2.34
HTL1YCR020W-B RPA34P47006 233 aaPredicted RBP0.42□□□□□ -2.34
HTL1YCR020W-B IRC4Q03036 179 aa0.42□□□□□ -2.34
HTL1YCR020W-B SNX41Q04053 625 aa0.42□□□□□ -2.34
HTL1YCR020W-B YDL144CQ07589 356 aa0.42□□□□□ -2.34
HTL1YCR020W-B YOR268CQ08734 132 aa0.42□□□□□ -2.34
HTL1YCR020W-B UTP23Q12339 254 aaKnown RBP0.42□□□□□ -2.34
HTL1YCR020W-B ACB1P31787 87 aa0.41□□□□□ -2.34
HTL1YCR020W-B DOA4P32571 926 aa0.41□□□□□ -2.34
HTL1YCR020W-B SWE1P32944 819 aa0.41□□□□□ -2.34
HTL1YCR020W-B TPO5P36029 618 aa0.41□□□□□ -2.34
HTL1YCR020W-B COG3P40094 801 aa0.41□□□□□ -2.34
HTL1YCR020W-B AYR1P40471 297 aa0.41□□□□□ -2.34
HTL1YCR020W-B UTP25P40498 721 aaKnown RBP0.41□□□□□ -2.34
HTL1YCR020W-B RVB1Q03940 463 aaKnown RBP0.41□□□□□ -2.34
HTL1YCR020W-B YLR446WQ06204 433 aa0.41□□□□□ -2.34
HTL1YCR020W-B YOL019WQ08157 551 aa0.41□□□□□ -2.34
HTL1YCR020W-B YEL009C-AA0A023PZF2 135 aa0.4□□□□□ -2.35
HTL1YCR020W-B OSM1P21375 501 aaKnown RBP0.4□□□□□ -2.35
HTL1YCR020W-B PUP2P32379 260 aa0.4□□□□□ -2.35
HTL1YCR020W-B YHL026CP38740 315 aa0.4□□□□□ -2.35
HTL1YCR020W-B GON7P46984 123 aa0.4□□□□□ -2.35
HTL1YCR020W-B NUP57P48837 541 aa0.4□□□□□ -2.35
HTL1YCR020W-B YNL146WP53906 100 aa0.4□□□□□ -2.35
HTL1YCR020W-B YNL143CP53908 130 aa0.4□□□□□ -2.35
HTL1YCR020W-B YOL162WP0CF19 215 aa0.39□□□□□ -2.35
HTL1YCR020W-B IFM1P25038 676 aa0.39□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms