RNA–Protein interactions for RNA: YBR295W

PCA1, Transcript of Cadmium transporting P-type ATPase, yeast

Gene PCA1, Length 3,651 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCA1	YBR295W	CRT10	Q08226	957 aa		4.36	□□□□□ -1.71
PCA1	YBR295W	SAL1	D6W196	494 aa		4.36	□□□□□ -1.71
PCA1	YBR295W	RPL1A	P0CX43	217 aa	Known RBP	4.36	□□□□□ -1.71
PCA1	YBR295W	RPL1B	P0CX44	217 aa	Known RBP	4.36	□□□□□ -1.71
PCA1	YBR295W	ARO2	P28777	376 aa	Known RBP	4.36	□□□□□ -1.71
PCA1	YBR295W	MF(ALPHA)2	P32435	120 aa		4.36	□□□□□ -1.71
PCA1	YBR295W	SRB5	P32585	307 aa		4.36	□□□□□ -1.71
PCA1	YBR295W	TMA19	P35691	167 aa	Known RBP	4.36	□□□□□ -1.71
PCA1	YBR295W	DTR1	P38125	572 aa		4.36	□□□□□ -1.71
PCA1	YBR295W	ERG7	P38604	731 aa		4.36	□□□□□ -1.71
PCA1	YBR295W	SRP68	P38687	599 aa	Known RBP	4.36	□□□□□ -1.71
PCA1	YBR295W	SAM37	P50110	327 aa		4.36	□□□□□ -1.71
PCA1	YBR295W	RIB4	P50861	169 aa	Predicted RBP	4.36	□□□□□ -1.71
PCA1	YBR295W	ADI1	Q03677	179 aa		4.36	□□□□□ -1.71
PCA1	YBR295W	CTS2	Q06350	511 aa		4.36	□□□□□ -1.71
PCA1	YBR295W	ACK1	Q07622	623 aa	Predicted RBP	4.36	□□□□□ -1.71
PCA1	YBR295W	PTC5	Q12511	572 aa		4.36	□□□□□ -1.71
PCA1	YBR295W	YLR422W	Q06409	1932 aa		4.36	□□□□□ -1.71
PCA1	YBR295W	SPE1	P08432	466 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	CPR1	P14832	162 aa	Known RBP	4.35	□□□□□ -1.71
PCA1	YBR295W	SNU13	P39990	126 aa	Known RBP	4.35	□□□□□ -1.71
PCA1	YBR295W	GET2	P40056	285 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	TAD2	P47058	250 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	AAT1	Q01802	451 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	DPP1	Q05521	289 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	YPR109W	Q06104	294 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	RDR1	Q08904	546 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	YCR075W-A	Q3E830	75 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	QCR2	P07257	368 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	MSS18	P08593	268 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	TGL1	P34163	548 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	MCH2	P36032	473 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	END3	P39013	349 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	ACA1	P39970	489 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	YER188W	P40103	239 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	VMA21	P41806	77 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	FIG4	P42837	879 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	TOS3	P43637	560 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	COS10	P52924	374 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	CRZ1	P53968	678 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	DAL4	Q04895	635 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	HRD3	Q05787	833 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	CNL1	Q06333	122 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	YLR413W	Q06689	675 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	TMS1	Q12116	473 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	GAL7	P08431	366 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	CKS1	P20486	150 aa	Known RBP	4.35	□□□□□ -1.71
PCA1	YBR295W	EHD3	P28817	500 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
PCA1	YBR295W	RER2	P35196	286 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	RIB5	P38145	238 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	CHS7	P38843	316 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	GDI1	P39958	451 aa	Known RBP	4.35	□□□□□ -1.71
PCA1	YBR295W	TRM112	P53738	135 aa	Predicted RBP	4.35	□□□□□ -1.71
PCA1	YBR295W	ECM30	Q06673	1274 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	GUD1	Q07729	489 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	PAM18	Q07914	168 aa		4.35	□□□□□ -1.71
PCA1	YBR295W	VAC17	P25591	423 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	YBR053C	P38235	358 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	TRS20	P38334	175 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	EAF5	P39995	279 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	ERG28	P40030	148 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	PRM10	P42946	383 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	YNL033W	P53964	284 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	YNL019C	P53975	284 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	TIM8	P57744	87 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	NAM8	Q00539	523 aa	Known RBP	4.34	□□□□□ -1.71
PCA1	YBR295W	UGO1	Q03327	502 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	RCR2	Q03446	210 aa	Known RBP	4.34	□□□□□ -1.71
PCA1	YBR295W	TY1A-MR1	Q04215	440 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	NAT5	Q08689	176 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.34	□□□□□ -1.71
PCA1	YBR295W	SUS1	Q6WNK7	96 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	CAN1	P04817	590 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	CDC4	P07834	779 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
PCA1	YBR295W	PHO80	P20052	293 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	SAG1	P20840	650 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	IPT1	P38954	527 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	RFC4	P40339	323 aa	Known RBP	4.34	□□□□□ -1.71
PCA1	YBR295W	AIF1	P52923	378 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	MPP6	P53725	186 aa	Predicted RBP	4.34	□□□□□ -1.71
PCA1	YBR295W	OAZ1	Q02803	292 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	YMR155W	Q03795	547 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	CUE4	Q04201	117 aa	Predicted RBP	4.34	□□□□□ -1.71
PCA1	YBR295W	CUR1	Q06469	252 aa		4.34	□□□□□ -1.71
PCA1	YBR295W	MSF1	P08425	469 aa		4.34	□□□□□ -1.72
PCA1	YBR295W	PBN1	P25580	416 aa		4.34	□□□□□ -1.72
PCA1	YBR295W	TOA2	P32774	122 aa		4.34	□□□□□ -1.72
PCA1	YBR295W	SDH3	P33421	198 aa		4.34	□□□□□ -1.72
PCA1	YBR295W	ATF1	P40353	525 aa		4.34	□□□□□ -1.72
PCA1	YBR295W	POG1	P40473	351 aa		4.34	□□□□□ -1.72
PCA1	YBR295W	YCH1	P42937	148 aa		4.34	□□□□□ -1.72
PCA1	YBR295W	ASN2	P49090	572 aa	Known RBP	4.34	□□□□□ -1.72
PCA1	YBR295W	ERG25	P53045	309 aa		4.34	□□□□□ -1.72
PCA1	YBR295W	MDM34	P53083	459 aa		4.34	□□□□□ -1.72
PCA1	YBR295W	YGR053C	P53234	283 aa		4.34	□□□□□ -1.72
PCA1	YBR295W	ATC1	Q04005	294 aa		4.34	□□□□□ -1.72
PCA1	YBR295W	THI72	Q08579	599 aa		4.34	□□□□□ -1.72
PCA1	YBR295W	RRG7	Q08774	242 aa	Predicted RBP	4.34	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms