RNA–Protein interactions for RNA: YBR253W

SRB6, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB6, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB6	YBR253W	SED5	Q01590	340 aa		4.25	□□□□□ -1.73
SRB6	YBR253W	RSC9	Q03124	581 aa		4.25	□□□□□ -1.73
SRB6	YBR253W	VPS74	Q06385	345 aa		4.25	□□□□□ -1.73
SRB6	YBR253W	ATG17	Q06410	417 aa		4.25	□□□□□ -1.73
SRB6	YBR253W	GRS2	Q06817	618 aa		4.25	□□□□□ -1.73
SRB6	YBR253W	MSH5	Q12175	901 aa		4.25	□□□□□ -1.73
SRB6	YBR253W	YDR018C	Q12185	396 aa		4.25	□□□□□ -1.73
SRB6	YBR253W	BI3	Q9ZZW7	517 aa		4.25	□□□□□ -1.73
SRB6	YBR253W	MYO1	P08964	1928 aa		4.25	□□□□□ -1.73
SRB6	YBR253W	RPL42A	P0CX27	106 aa	Known RBP	4.24	□□□□□ -1.73
SRB6	YBR253W	RPL42B	P0CX28	106 aa	Known RBP	4.24	□□□□□ -1.73
SRB6	YBR253W	NHP6B	P11633	99 aa	Known RBP	4.24	□□□□□ -1.73
SRB6	YBR253W	DAL82	P21705	255 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	PTP1	P25044	335 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	RBK1	P25332	333 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	DCC1	P25559	380 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	PPA2	P28239	310 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	ERG9	P29704	444 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	MEI5	P32489	222 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	GLC7	P32598	312 aa	Known RBP	4.24	□□□□□ -1.73
SRB6	YBR253W	SIP2	P34164	415 aa	Known RBP	4.24	□□□□□ -1.73
SRB6	YBR253W	CUE2	P36075	443 aa	Known RBP	4.24	□□□□□ -1.73
SRB6	YBR253W	PDX3	P38075	228 aa	Known RBP	4.24	□□□□□ -1.73
SRB6	YBR253W	MRX3	P38172	270 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	YHK8	P38776	514 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	FIS1	P40515	155 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	DIM1	P41819	318 aa	Known RBP	4.24	□□□□□ -1.73
SRB6	YBR253W	SFH5	P47008	294 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	CPR7	P47103	393 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	HSH155	P49955	971 aa	Known RBP	4.24	□□□□□ -1.73
SRB6	YBR253W	MRM2	P53123	320 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	YGL039W	P53183	348 aa	Known RBP	4.24	□□□□□ -1.73
SRB6	YBR253W	CAF40	P53829	373 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	IDP3	P53982	420 aa	Known RBP	4.24	□□□□□ -1.73
SRB6	YBR253W	YDR476C	Q03362	224 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	CCE1	Q03702	353 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	OST6	Q03723	332 aa		4.24	□□□□□ -1.73
SRB6	YBR253W	MEX67	Q99257	599 aa	Known RBP	4.24	□□□□□ -1.73
SRB6	YBR253W	ATP6	P00854	259 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	YPK2	P18961	677 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	APA2	P22108	325 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	PBN1	P25580	416 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	ZRT1	P32804	376 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	TIR2	P33890	251 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	SLX1	P38324	304 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	YPT35	P38815	214 aa	Known RBP	4.23	□□□□□ -1.73
SRB6	YBR253W	PFS1	P38872	237 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	FLO5	P38894	1075 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	MST28	P39552	234 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	NPT1	P39683	429 aa	Known RBP	4.23	□□□□□ -1.73
SRB6	YBR253W	MAM33	P40513	266 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	AZF1	P41696	914 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	YFL040W	P43562	540 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	RRT5	P43607	289 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	YJR030C	P47101	745 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	RBL2	P48606	106 aa	Known RBP	4.23	□□□□□ -1.73
SRB6	YBR253W	MRPL50	P53724	139 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	COS1	P53822	381 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	YET2	Q04210	160 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	KRE28	Q04431	385 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	PRM6	Q04705	352 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	IRC10	Q08118	586 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	MUM3	Q08750	479 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	GET4	Q12125	312 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	YLR108C	Q12259	485 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	NOT5	Q12514	560 aa	Predicted RBP	4.23	□□□□□ -1.73
SRB6	YBR253W	FIG2	P25653	1609 aa		4.23	□□□□□ -1.73
SRB6	YBR253W	MRP1	P10662	321 aa	Known RBP	4.22	□□□□□ -1.73
SRB6	YBR253W	ZRC1	P20107	442 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	SLY1	P22213	666 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	YCR022C	P25620	114 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	SRL3	P36167	246 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	SCO2	P38072	301 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	CHK1	P38147	527 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	FRT2	P39734	528 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	HAT2	P39984	401 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	PEP8	P40335	379 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	SNO3	P43544	222 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	RTT101	P47050	842 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	HAM1	P47119	197 aa	Known RBP	4.22	□□□□□ -1.73
SRB6	YBR253W	LIF1	P53150	421 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	SLI1	P53304	468 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	ALG11	P53954	548 aa	Known RBP	4.22	□□□□□ -1.73
SRB6	YBR253W	RNY1	Q02933	434 aa	Known RBP	4.22	□□□□□ -1.73
SRB6	YBR253W	BCH1	Q05029	724 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	THI7	Q05998	598 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	FLO11	P08640	1367 aa		4.22	□□□□□ -1.73
SRB6	YBR253W	RPS3	P05750	240 aa	Known RBP	4.21	□□□□□ -1.74
SRB6	YBR253W	TUB1	P09733	447 aa	Known RBP	4.21	□□□□□ -1.74
SRB6	YBR253W	TCP1	P12612	559 aa	Known RBP	4.21	□□□□□ -1.74
SRB6	YBR253W	ATR1	P13090	542 aa		4.21	□□□□□ -1.74
SRB6	YBR253W	YAP1	P19880	650 aa	Known RBP	4.21	□□□□□ -1.74
SRB6	YBR253W	DPB2	P24482	689 aa	Predicted RBP	4.21	□□□□□ -1.74
SRB6	YBR253W	MEI4	P29467	408 aa		4.21	□□□□□ -1.74
SRB6	YBR253W	ITR2	P30606	609 aa		4.21	□□□□□ -1.74
SRB6	YBR253W	ATO2	P32907	282 aa		4.21	□□□□□ -1.74
SRB6	YBR253W	RRP3	P38712	501 aa	Known RBP	4.21	□□□□□ -1.74
SRB6	YBR253W	YIL024C	P40543	189 aa		4.21	□□□□□ -1.74
SRB6	YBR253W	TRM112	P53738	135 aa	Predicted RBP	4.21	□□□□□ -1.74
SRB6	YBR253W	YKR005C	Q02203	525 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms