RNA–Protein interactions for RNA: YBR082C

UBC4, Transcript of Ubiquitin-conjugating enzyme (E2), yeast

Gene UBC4, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC4	YBR082C	PDR16	P53860	351 aa	Known RBP	4.86	□□□□□ -1.63
UBC4	YBR082C	YKR005C	Q02203	525 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	ATG21	Q02887	496 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	YMR252C	Q04814	134 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	MRPL51	Q06090	140 aa	Predicted RBP	4.86	□□□□□ -1.63
UBC4	YBR082C	YPR109W	Q06104	294 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	RDL2	Q08742	149 aa	Known RBP	4.86	□□□□□ -1.63
UBC4	YBR082C	RRG7	Q08774	242 aa	Predicted RBP	4.86	□□□□□ -1.63
UBC4	YBR082C	BAG7	Q12128	409 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	FRE7	Q12333	620 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	FRE6	Q12473	712 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	YOR343C	Q12484	108 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	SFG1	Q12507	346 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	YOR032W-A	Q8TGS1	66 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	YAL064W-B	O13512	126 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	RIP1	P08067	215 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	RPA135	P22138	1203 aa	Known RBP	4.85	□□□□□ -1.63
UBC4	YBR082C	CPR2	P23285	205 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	ERG8	P24521	451 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	STE50	P25344	346 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	LDB16	P25587	256 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	CPR3	P25719	182 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	NUD1	P32336	851 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	DOA4	P32571	926 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	RIB7	P33312	244 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	ZRT3	P34240	503 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	MTH1	P35198	433 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	MBA1	P38300	278 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	IPI1	P38803	334 aa	Predicted RBP	4.85	□□□□□ -1.63
UBC4	YBR082C	SHO1	P40073	367 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	PKP1	P40530	394 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	REE1	P40893	198 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	PAM16	P42949	149 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	PMT5	P52867	743 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	YGR066C	P53242	292 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	YGR126W	P53274	230 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	YPL039W	Q03080	316 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	SCS7	Q03529	384 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	GIS1	Q03833	894 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	MIX14	Q04341	121 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	PEX10	Q05568	337 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	RGC1	Q06108	1083 aa	Known RBP	4.85	□□□□□ -1.63
UBC4	YBR082C	RCN2	Q12044	265 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	YRA1	Q12159	226 aa	Known RBP	4.85	□□□□□ -1.63
UBC4	YBR082C	HSP42	Q12329	375 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	SWM1	Q12379	170 aa		4.85	□□□□□ -1.63
UBC4	YBR082C	GCN4	P03069	281 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	MSW1	P04803	379 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	RPS13	P05756	151 aa	Known RBP	4.84	□□□□□ -1.63
UBC4	YBR082C	PDE2	P06776	526 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	YFR010W-A	P0C5N0	62 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	RPS18A	P0CX55	146 aa	Known RBP	4.84	□□□□□ -1.63
UBC4	YBR082C	RPS18B	P0CX56	146 aa	Predicted RBP	4.84	□□□□□ -1.63
UBC4	YBR082C	MRP1	P10662	321 aa	Known RBP	4.84	□□□□□ -1.63
UBC4	YBR082C	HMG1	P12683	1054 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	CAP2	P13517	287 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	PDX1	P16451	410 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	YCR102C	P25608	368 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	HOM6	P31116	359 aa	Known RBP	4.84	□□□□□ -1.63
UBC4	YBR082C	RPC34	P32910	317 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	TMA19	P35691	167 aa	Known RBP	4.84	□□□□□ -1.63
UBC4	YBR082C	ANR2	P36090	516 aa	Predicted RBP	4.84	□□□□□ -1.63
UBC4	YBR082C	POP1	P41812	875 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	PMT6	P42934	759 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	RPE1	P46969	238 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	IKS1	P47042	667 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	LYS5	P50113	272 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	MRH4	P53166	561 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	IMO32	P53219	342 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	APM1	Q00776	475 aa	Predicted RBP	4.84	□□□□□ -1.63
UBC4	YBR082C	RSM10	Q03201	203 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	RSM24	Q03976	319 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	BNA7	Q04066	261 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	MRX8	Q05473	314 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	YPR147C	Q06522	304 aa	Known RBP	4.84	□□□□□ -1.63
UBC4	YBR082C	TSR2	Q06672	205 aa	Known RBP	4.84	□□□□□ -1.63
UBC4	YBR082C	RAX1	Q08760	435 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	YPL199C	Q08954	240 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	MDM32	Q12171	622 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	TIR4	Q12218	487 aa	Predicted RBP	4.84	□□□□□ -1.63
UBC4	YBR082C	MTR10	Q99189	972 aa		4.84	□□□□□ -1.63
UBC4	YBR082C	BRR2	P32639	2163 aa	Known RBP	4.84	□□□□□ -1.64
UBC4	YBR082C	QCR7	P00128	127 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	SOD2	P00447	233 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	CYT1	P07143	309 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	COX9	P07255	59 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	STE12	P13574	688 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	SCO1	P23833	295 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	KRR1	P25586	316 aa	Predicted RBP	4.83	□□□□□ -1.64
UBC4	YBR082C	PTC6	P25646	442 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	PPA2	P28239	310 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	SPT14	P32363	452 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	PAU2	P32612	120 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	SPT10	P35208	640 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	SRP102	P36057	244 aa	Predicted RBP	4.83	□□□□□ -1.64
UBC4	YBR082C	CCZ1	P38273	704 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	ECO1	P43605	281 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	IRC18	P47056	224 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	CCC1	P47818	322 aa		4.83	□□□□□ -1.64
UBC4	YBR082C	SDC1	Q03323	175 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms