RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 IER5LQ5T953 404 aa23.2■■□□□ 1.3
TRAPPC3-208ENST00000616074 OTUD6AQ7L8S5 288 aa23.2■■□□□ 1.3
TRAPPC3-208ENST00000616074 MRPL10Q7Z7H8 261 aaKnown RBP23.2■■□□□ 1.3
TRAPPC3-208ENST00000616074 SUGP1Q8IWZ8 645 aaKnown RBP23.2■■□□□ 1.3
TRAPPC3-208ENST00000616074 PRSS33Q8NF86 280 aa23.2■■□□□ 1.3
TRAPPC3-208ENST00000616074 WASF1Q92558 559 aa23.2■■□□□ 1.3
TRAPPC3-208ENST00000616074 TNFRSF25Q93038 417 aa23.2■■□□□ 1.3
TRAPPC3-208ENST00000616074 NECTIN4Q96NY8 510 aa23.2■■□□□ 1.3
TRAPPC3-208ENST00000616074 ZSWIM4Q9H7M6 989 aa23.2■■□□□ 1.3
TRAPPC3-208ENST00000616074 RSAD1Q9HA92 442 aa23.2■■□□□ 1.3
TRAPPC3-208ENST00000616074 NR2E1Q9Y466 385 aa23.2■■□□□ 1.3
TRAPPC3-208ENST00000616074 ZDBF2Q9HCK1 2354 aa23.2■■□□□ 1.3
TRAPPC3-208ENST00000616074 GAS2O43903 313 aaKnown RBP23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 DDHD2O94830 711 aa23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 WEE2P0C1S8 567 aa23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 EPCAMP16422 314 aa23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 KRT2P35908 639 aa23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 GIT2Q14161 759 aa23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 RARS2Q5T160 578 aaKnown RBP23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 FERMT3Q86UX7 667 aa23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 SLFN12Q8IYM2 578 aa23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 FBXL6Q8N531 539 aa23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 C12orf76Q8N812 135 aaPredicted RBP23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 TMEM87AQ8NBN3 555 aa23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 RNF149Q8NC42 400 aa23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 URGCPQ8TCY9 931 aa23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 TCP11Q8WWU5 503 aa23.19■■□□□ 1.3
TRAPPC3-208ENST00000616074 CNTNAP2Q9UHC6 1331 aa23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 C2CD4DB7Z1M9 353 aa23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 BAG4O95429 457 aaKnown RBP23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 LARGE1O95461 756 aa23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 ANAPC15P60006 121 aa23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 ANKRD1Q15327 319 aa23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 KANK3Q6NY19 840 aa23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 ZBTB33Q86T24 672 aa23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 NECAB1Q8N987 351 aa23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 SLC22A17Q8WUG5 538 aa23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 MTRQ99707 1265 aa23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 XPNPEP1Q9NQW7 623 aa23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 DZANK1Q9NVP4 752 aa23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 MYO10Q9HD67 2058 aa23.18■■□□□ 1.3
TRAPPC3-208ENST00000616074 DENND4AQ7Z401 1863 aa23.17■■□□□ 1.3
TRAPPC3-208ENST00000616074 ASAP2O43150 1006 aa23.17■■□□□ 1.3
TRAPPC3-208ENST00000616074 SLITRK3O94933 977 aa23.17■■□□□ 1.3
TRAPPC3-208ENST00000616074 MTHFRP42898 656 aa23.17■■□□□ 1.3
TRAPPC3-208ENST00000616074 PTPN14Q15678 1187 aa23.17■■□□□ 1.3
TRAPPC3-208ENST00000616074 ME3Q16798 604 aa23.17■■□□□ 1.3
TRAPPC3-208ENST00000616074 TPH2Q8IWU9 490 aa23.17■■□□□ 1.3
TRAPPC3-208ENST00000616074 BRMS1Q9HCU9 246 aa23.17■■□□□ 1.3
TRAPPC3-208ENST00000616074 POMCP01189 267 aa23.16■■□□□ 1.3
TRAPPC3-208ENST00000616074 NCLP19338 710 aaKnown RBP23.16■■□□□ 1.3
TRAPPC3-208ENST00000616074 KIAA1841Q6NSI8 718 aa23.16■■□□□ 1.3
TRAPPC3-208ENST00000616074 SMG8Q8ND04 991 aaKnown RBP23.16■■□□□ 1.3
TRAPPC3-208ENST00000616074 FEZF2Q8TBJ5 459 aa23.16■■□□□ 1.3
TRAPPC3-208ENST00000616074 GTF3C6Q969F1 213 aa23.16■■□□□ 1.3
TRAPPC3-208ENST00000616074 RIPOR3Q96MK2 946 aa23.16■■□□□ 1.3
TRAPPC3-208ENST00000616074 EIF2AK1Q9BQI3 630 aaKnown RBP23.16■■□□□ 1.3
TRAPPC3-208ENST00000616074 TMEM175Q9BSA9 504 aa23.16■■□□□ 1.3
TRAPPC3-208ENST00000616074 TDRD15B5MCY1 1934 aaKnown RBP23.16■■□□□ 1.3
TRAPPC3-208ENST00000616074 TSPAN1O60635 241 aa23.15■■□□□ 1.3
TRAPPC3-208ENST00000616074 ERLIN2O94905 339 aa23.15■■□□□ 1.3
TRAPPC3-208ENST00000616074 SSBP05455 408 aaKnown RBP eCLIP23.15■■□□□ 1.3
TRAPPC3-208ENST00000616074 VCPP55072 806 aaKnown RBP23.15■■□□□ 1.3
TRAPPC3-208ENST00000616074 KREMEN2Q8NCW0 462 aa23.15■■□□□ 1.3
TRAPPC3-208ENST00000616074 FAM193BQ96PV7 902 aaPredicted RBP23.15■■□□□ 1.3
TRAPPC3-208ENST00000616074 EIF2AQ9BY44 585 aaKnown RBP23.15■■□□□ 1.3
TRAPPC3-208ENST00000616074 KANSL3Q9P2N6 904 aa23.15■■□□□ 1.3
TRAPPC3-208ENST00000616074 WNT7AO00755 349 aa23.14■■□□□ 1.29
TRAPPC3-208ENST00000616074 NRP1O14786 923 aa23.14■■□□□ 1.29
TRAPPC3-208ENST00000616074 PTENP60484 403 aa23.14■■□□□ 1.29
TRAPPC3-208ENST00000616074 CALCRLQ16602 461 aa23.14■■□□□ 1.29
TRAPPC3-208ENST00000616074 NSUN7Q8NE18 718 aaKnown RBP23.14■■□□□ 1.29
TRAPPC3-208ENST00000616074 CPB2Q96IY4 423 aa23.14■■□□□ 1.29
TRAPPC3-208ENST00000616074 PHOX2BQ99453 314 aa23.14■■□□□ 1.29
TRAPPC3-208ENST00000616074 HSD17B14Q9BPX1 270 aa23.14■■□□□ 1.29
TRAPPC3-208ENST00000616074 PCDHA12Q9UN75 941 aa23.14■■□□□ 1.29
TRAPPC3-208ENST00000616074 FAN1Q9Y2M0 1017 aa23.14■■□□□ 1.29
TRAPPC3-208ENST00000616074 IPPQ9Y573 584 aa23.14■■□□□ 1.29
TRAPPC3-208ENST00000616074 USP34Q70CQ2 3546 aa23.14■■□□□ 1.29
TRAPPC3-208ENST00000616074 C2orf16Q68DN1 1984 aa23.14■■□□□ 1.29
TRAPPC3-208ENST00000616074 BTBD18B2RXH4 712 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 LYPLA2O95372 231 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 PDGFBP01127 241 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 ALDH2P05091 517 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 ITGA4P13612 1032 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 FOSBP53539 338 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 PTPN5P54829 565 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 TCF15Q12870 199 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 MTMR3Q13615 1198 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 MXD4Q14582 209 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 ATAT1Q5SQI0 421 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 TMC5Q6UXY8 1006 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 CABP7Q86V35 215 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 PPFIBP1Q86W92 1011 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 CNNM3Q8NE01 707 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 ASAP3Q8TDY4 903 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 KLHL5Q96PQ7 755 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 RNF39Q9H2S5 420 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 TTC12Q9H892 705 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 MARCH5Q9NX47 278 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms