RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 TRIM28Q13263 835 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 RIPK1Q13546 671 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ITGA7Q13683 1181 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 MOGSQ13724 837 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 TUBB2AQ13885 445 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 SGSM1Q2NKQ1 1148 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 PROSER3Q2NL68 480 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 P3H1Q32P28 736 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 SLC44A4Q53GD3 710 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ANKRD39Q53RE8 183 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 CFAP157Q5JU67 520 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 MZT2AQ6P582 158 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 CRTC1Q6UUV9 634 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 LDHAL6AQ6ZMR3 332 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 BNC2Q6ZN30 1099 aaPredicted RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 EXOC3L1Q86VI1 746 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 HEATR4Q86WZ0 1026 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 CEP70Q8NHQ1 597 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 AGAP11Q8TF27 550 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 COG8Q96MW5 612 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 TTC25Q96NG3 672 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 TRAPPC9Q96Q05 1148 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 C7orf25Q9BPX7 421 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 TUBB2BQ9BVA1 445 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ETNK1Q9HBU6 452 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 NCOA5Q9HCD5 579 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 HYPKQ9NX55 129 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 IFNKQ9P0W0 207 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 SUCLA2Q9P2R7 463 aaPredicted RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ZNF180Q9UJW8 692 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 SH3TC1Q8TE82 1336 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 TMEM131LA2VDJ0 1609 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 GOLGA6L10A0A0M3HER8 536 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 HTR3EA5X5Y0 456 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 H3BRJ5 948 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 AGPSO00116 658 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 MAN1A2O60476 641 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 FLOT1O75955 427 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 STAMBPO95630 424 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 LDHBP07195 334 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 NFKBIAP25963 317 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 LSP1P33241 339 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 TCF7P36402 384 aaPredicted RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 NR2C2P49116 596 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 TUBP50607 506 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 GDF10P55107 478 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 MORC3Q14149 939 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 MAP7Q14244 749 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 CBX2Q14781 532 aaPredicted RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 GRM3Q14832 879 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ODF1Q14990 250 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 USH1GQ495M9 461 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 STXBP5Q5T5C0 1151 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 NEK5Q6P3R8 708 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ZNF554Q86TJ5 538 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 RAB11FIP4Q86YS3 637 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 DHX40Q8IX18 779 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 LSMEM1Q8N8F7 131 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 NPLOC4Q8TAT6 608 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 MYCBPAPQ8TBZ2 947 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ATP6V0A1Q93050 837 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 VPS50Q96JG6 964 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 CCT8L2Q96SF2 557 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 NUDT16L1Q9BRJ7 211 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ESYT1Q9BSJ8 1104 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 TRIM55Q9BYV6 548 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 NACAP1Q9BZK3 213 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 NRDE2Q9H7Z3 1164 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ABCF3Q9NUQ8 709 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 QPCTLQ9NXS2 382 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 IFT80Q9P2H3 777 aaPredicted RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 STK39Q9UEW8 545 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 DDX25Q9UHL0 483 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 DCTN4Q9UJW0 460 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 TIMM22Q9Y584 194 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 STRCP1A6NGW2 1772 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 FIGNL2A6NMB9 653 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ARHGAP6O43182 974 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 KDM1AO60341 852 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 KPNA6O60684 536 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 AKR1B1P15121 316 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ENDOUP21128 410 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 MZF1P28698 734 aaPredicted RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 HSD17B2P37059 387 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 SOS2Q07890 1332 aaPredicted RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 IFIT5Q13325 482 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 GALEQ14376 348 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 KARSQ15046 597 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 CRY1Q16526 586 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 MMEL1Q495T6 779 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 SETMARQ53H47 684 aaPredicted RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 LACTB2Q53H82 288 aaPredicted RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ZMYM1Q5SVZ6 1142 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 ZNF787Q6DD87 383 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 PPIP5K1Q6PFW1 1433 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 LARP1Q6PKG0 1096 aaKnown RBP5.08□□□□□ -1.6
LINC01109-201ENST00000603837 BEND5Q7L4P6 421 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 HS2ST1Q7LGA3 356 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 DGLUCYQ7Z3D6 616 aa5.08□□□□□ -1.6
LINC01109-201ENST00000603837 PALB2Q86YC2 1186 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms