RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 MCTP2Q6DN12 878 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 CCDC174Q6PII3 467 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 ACAD11Q709F0 780 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 SLITRK4Q8IW52 837 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 DAGLBQ8NCG7 672 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 FBXO18Q8NFZ0 1043 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 BICD2Q8TD16 824 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 PIBF1Q8WXW3 757 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 DEFB118Q96PH6 123 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 ZMYND12Q9H0C1 365 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMG9-207ENST00000598860 C6orf50Q9HD87 102 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 PAK6Q9NQU5 681 aaPredicted RBP11.8□□□□□ -0.52
SMG9-207ENST00000598860 SLC5A4Q9NY91 659 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 ZNF214Q9UL59 606 aaPredicted RBP11.8□□□□□ -0.52
SMG9-207ENST00000598860 CCPG1Q9ULG6 757 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 HTTP42858 3142 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 ZNF536O15090 1300 aa11.8□□□□□ -0.52
SMG9-207ENST00000598860 FAM221AA4D161 298 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 F8W735 103 aaPredicted RBP11.79□□□□□ -0.52
SMG9-207ENST00000598860 PPP1R11O60927 126 aaPredicted RBP11.79□□□□□ -0.52
SMG9-207ENST00000598860 ALX3O95076 343 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 MMP1P03956 469 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 FCER1AP12319 257 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 ADORA2AP29274 412 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 DDIT3P35638 169 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 ADCY7P51828 1080 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 AP3B2Q13367 1082 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 SEZ6Q53EL9 994 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 KRT40Q6A162 431 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 PDZD3Q86UT5 571 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 RIOX2Q8IUF8 465 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 ABRAQ8N0Z2 381 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 CPXCR1Q8N123 301 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 AGGF1Q8N302 714 aaeCLIP11.79□□□□□ -0.52
SMG9-207ENST00000598860 WFDC12Q8WWY7 111 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 GAL3ST3Q96A11 431 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 SHISA4Q96DD7 197 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 AIFM3Q96NN9 605 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 SPOCK3Q9BQ16 436 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 PHF20Q9BVI0 1012 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 MAP3K20Q9NYL2 800 aaKnown RBP11.79□□□□□ -0.52
SMG9-207ENST00000598860 CHMP5Q9NZZ3 219 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 VPS54Q9P1Q0 977 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 FBXO40Q9UH90 709 aa11.79□□□□□ -0.52
SMG9-207ENST00000598860 KIAA1217Q5T5P2 1943 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 VPS37CA5D8V6 355 aaPredicted RBP11.78□□□□□ -0.52
SMG9-207ENST00000598860 MSTNO14793 375 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 NOS3P29474 1203 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 MRPL12P52815 198 aaKnown RBP11.78□□□□□ -0.52
SMG9-207ENST00000598860 CACNB2Q08289 660 aaPredicted RBP11.78□□□□□ -0.52
SMG9-207ENST00000598860 MPP2Q14168 576 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 CCDC144BQ3MJ40 725 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 USH1GQ495M9 461 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 MAP3K21Q5TCX8 1036 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 SNRNP48Q6IEG0 339 aaKnown RBP11.78□□□□□ -0.52
SMG9-207ENST00000598860 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.78□□□□□ -0.52
SMG9-207ENST00000598860 TMEM130Q8N3G9 435 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 CHST13Q8NET6 341 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 NPLOC4Q8TAT6 608 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 CUL5Q93034 780 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 MMP19Q99542 508 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 AKTIPQ9H8T0 292 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 RAVER2Q9HCJ3 691 aaKnown RBP11.78□□□□□ -0.52
SMG9-207ENST00000598860 MCM3APO60318 1980 aa11.78□□□□□ -0.52
SMG9-207ENST00000598860 SMCO2A6NFE2 343 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 COBLO75128 1261 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 FARP2O94887 1054 aaPredicted RBP11.77□□□□□ -0.53
SMG9-207ENST00000598860 PROCP04070 461 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 ALAS1P13196 640 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 KRT2P35908 639 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 SNAP25P60880 206 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 GHRHRQ02643 423 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 KCTD2Q14681 263 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 BLIDQ8IZY5 108 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 FOXP1Q9H334 677 aaPredicted RBP11.77□□□□□ -0.53
SMG9-207ENST00000598860 ZSCAN16Q9H4T2 348 aaPredicted RBP11.77□□□□□ -0.53
SMG9-207ENST00000598860 ACAD9Q9H845 621 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 RIC8AQ9NPQ8 531 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 RNF146Q9NTX7 359 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 FLRT1Q9NZU1 646 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 PCDHA4Q9UN74 947 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 MTMR6Q9Y217 621 aa11.77□□□□□ -0.53
SMG9-207ENST00000598860 TNRC18O15417 2968 aaPredicted RBP11.76□□□□□ -0.53
SMG9-207ENST00000598860 CILPO75339 1184 aa11.76□□□□□ -0.53
SMG9-207ENST00000598860 GSTP1P09211 210 aaKnown RBP11.76□□□□□ -0.53
SMG9-207ENST00000598860 ZSCAN22P10073 491 aaPredicted RBP11.76□□□□□ -0.53
SMG9-207ENST00000598860 GUCY1B3Q02153 619 aa11.76□□□□□ -0.53
SMG9-207ENST00000598860 OLFML2BQ68BL8 750 aa11.76□□□□□ -0.53
SMG9-207ENST00000598860 BRAPQ7Z569 592 aa11.76□□□□□ -0.53
SMG9-207ENST00000598860 CKAP2LQ8IYA6 745 aa11.76□□□□□ -0.53
SMG9-207ENST00000598860 DIS3L2Q8IYB7 885 aaKnown RBP11.76□□□□□ -0.53
SMG9-207ENST00000598860 REXO1Q8N1G1 1221 aaKnown RBP11.76□□□□□ -0.53
SMG9-207ENST00000598860 PSTPIP2Q9H939 334 aa11.76□□□□□ -0.53
SMG9-207ENST00000598860 EHMT1Q9H9B1 1298 aa11.76□□□□□ -0.53
SMG9-207ENST00000598860 KCNJ14Q9UNX9 436 aa11.76□□□□□ -0.53
SMG9-207ENST00000598860 ATP6V1DQ9Y5K8 247 aa11.76□□□□□ -0.53
SMG9-207ENST00000598860 MRVI1Q9Y6F6 885 aa11.76□□□□□ -0.53
SMG9-207ENST00000598860 GCOM1H8Y6P7 765 aaPredicted RBP11.75□□□□□ -0.53
SMG9-207ENST00000598860 DTNBO60941 627 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms