RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 TOB1P50616 345 aaPredicted RBP17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 RNASELQ05823 741 aaKnown RBP17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 SMAD4Q13485 552 aaKnown RBP17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 SMAD2Q15796 467 aaKnown RBP17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 SMG8Q8ND04 991 aaKnown RBP17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 BCL7CQ8WUZ0 217 aaPredicted RBP17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 AUTS2Q8WXX7 1259 aa17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 PGBD4Q96DM1 585 aa17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 POLR3CQ9BUI4 534 aaPredicted RBP17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 APOL6Q9BWW8 343 aa17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 RNF39Q9H2S5 420 aa17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 TUFT1Q9NNX1 390 aa17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 NOL7Q9UMY1 257 aaKnown RBP17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 PCDHB6Q9Y5E3 794 aa17.3■□□□□ 0.36
PPFIA4-208ENST00000597023 B4GALT5O43286 388 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 DDHD2O94830 711 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 POMCP01189 267 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 GALTP07902 379 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 U2AF2P26368 475 aaKnown RBP eCLIP17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 SLC11A1P49279 550 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 MBTD1Q05BQ5 628 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 ECM1Q16610 540 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 MCTP1Q6DN14 999 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 PDE12Q6L8Q7 609 aaKnown RBP17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 MRPL10Q7Z7H8 261 aaKnown RBP17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 ADHFE1Q8IWW8 467 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 VPS52Q8N1B4 723 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 TMEM169Q96HH4 297 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 TMX3Q96JJ7 454 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 NACC1Q96RE7 527 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 RSAD1Q9HA92 442 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 UPF2Q9HAU5 1272 aaKnown RBP17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 HES2Q9Y543 173 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 IPPQ9Y573 584 aa17.29■□□□□ 0.36
PPFIA4-208ENST00000597023 LRRIQ4A6NIV6 560 aa17.28■□□□□ 0.36
PPFIA4-208ENST00000597023 CXCL14O95715 111 aa17.28■□□□□ 0.36
PPFIA4-208ENST00000597023 XRCC6P12956 609 aaKnown RBP eCLIP17.28■□□□□ 0.36
PPFIA4-208ENST00000597023 NCLP19338 710 aaKnown RBP17.28■□□□□ 0.36
PPFIA4-208ENST00000597023 CCT6AP40227 531 aaKnown RBP17.28■□□□□ 0.36
PPFIA4-208ENST00000597023 AMHR2Q16671 573 aa17.28■□□□□ 0.36
PPFIA4-208ENST00000597023 PADI6Q6TGC4 694 aa17.28■□□□□ 0.36
PPFIA4-208ENST00000597023 SMRP1Q8NCR6 262 aa17.28■□□□□ 0.36
PPFIA4-208ENST00000597023 ERMNQ8TAM6 284 aa17.28■□□□□ 0.36
PPFIA4-208ENST00000597023 URGCPQ8TCY9 931 aa17.28■□□□□ 0.36
PPFIA4-208ENST00000597023 C1QTNF1Q9BXJ1 281 aa17.28■□□□□ 0.36
PPFIA4-208ENST00000597023 NGRNQ9NPE2 291 aaKnown RBP17.28■□□□□ 0.36
PPFIA4-208ENST00000597023 DBR1Q9UK59 544 aaKnown RBP17.28■□□□□ 0.36
PPFIA4-208ENST00000597023 ARHGEF35A5YM69 484 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 PI4K2BG5E9Z4 385 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 EYA4O95677 639 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 ITGA4P13612 1032 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 ARF4P18085 180 aaPredicted RBP17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 RPA1P27694 616 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 TRAPPC10P48553 1259 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 COASYQ13057 564 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 PTGDRQ13258 359 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 ORC2Q13416 577 aaPredicted RBP17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 SMC1AQ14683 1233 aaKnown RBP17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 NOTUMQ6P988 496 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 IFNLR1Q8IU57 520 aaPredicted RBP17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 MRPL43Q8N983 215 aaKnown RBP17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 BSNDQ8WZ55 320 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 IGSF21Q96ID5 467 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 FAM193BQ96PV7 902 aaPredicted RBP17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 CDCA3Q99618 268 aaPredicted RBP17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 LRFN3Q9BTN0 628 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 CSRNP2Q9H175 543 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 MIOSQ9NXC5 875 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 LRWD1Q9UFC0 647 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 PRKAG3Q9UGI9 489 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 USP20Q9Y2K6 914 aa17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 USP15Q9Y4E8 981 aaPredicted RBP17.27■□□□□ 0.36
PPFIA4-208ENST00000597023 C2orf71A6NGG8 1288 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 C19orf67A6NJJ6 358 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 PP2D1A8MPX8 630 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 NPTXRO95502 500 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 LIG1P18858 919 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 GJB2P29033 226 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 AXLP30530 894 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 POU5F1BQ06416 359 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 NCBP1Q09161 790 aaKnown RBP17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 IL17AQ16552 155 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 ZFP42Q96MM3 310 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 GAD1Q99259 594 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 VN1R3Q9BXE9 311 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 NXF3Q9H4D5 531 aaKnown RBP17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 C11orf16Q9NQ32 467 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 CDH22Q9UJ99 828 aa17.26■□□□□ 0.35
PPFIA4-208ENST00000597023 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.25■□□□□ 0.35
PPFIA4-208ENST00000597023 TTLL13PA6NNM8 815 aa17.25■□□□□ 0.35
PPFIA4-208ENST00000597023 CLASP2O75122 1294 aaKnown RBP17.25■□□□□ 0.35
PPFIA4-208ENST00000597023 SSBP05455 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
PPFIA4-208ENST00000597023 AKAP5P24588 427 aa17.25■□□□□ 0.35
PPFIA4-208ENST00000597023 CDC25AP30304 524 aa17.25■□□□□ 0.35
PPFIA4-208ENST00000597023 MLH1P40692 756 aa17.25■□□□□ 0.35
PPFIA4-208ENST00000597023 FXR2P51116 673 aaKnown RBP eCLIP17.25■□□□□ 0.35
PPFIA4-208ENST00000597023 KCNC3Q14003 757 aa17.25■□□□□ 0.35
PPFIA4-208ENST00000597023 TMEM31Q5JXX7 168 aa17.25■□□□□ 0.35
PPFIA4-208ENST00000597023 ANKRD54Q6NXT1 300 aa17.25■□□□□ 0.35
PPFIA4-208ENST00000597023 SYCE2Q6PIF2 218 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms