RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 PPP4R3CPQ6ZMV5 832 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 CCDC65Q8IXS2 484 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 DAW1Q8N136 415 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 RNF169Q8NCN4 708 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 LRRC15Q8TF66 581 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 TOP1MTQ969P6 601 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 TIFAQ96CG3 184 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 BICD1Q96G01 975 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 RAD9AQ99638 391 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 PBX4Q9BYU1 374 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 SLC28A3Q9HAS3 691 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 POLD4Q9HCU8 107 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 TMEM161AQ9NX61 479 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 ARHGAP28Q9P2N2 729 aa13.08□□□□□ -0.32
SDHDP1-201ENST00000588055 MYMKA6NI61 221 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 GRXCR1A8MXD5 290 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 C9IYK1 514 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 TRAK2O60296 914 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 SLFN14P0C7P3 912 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 ZNF131P52739 623 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 RABGGTBP53611 331 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 DSC3Q14574 896 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 FAM187BQ17R55 369 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 SLC27A1Q6PCB7 646 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 STXBP4Q6ZWJ1 553 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 TMCO2Q7Z6W1 182 aaPredicted RBP13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 CNNM3Q8NE01 707 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 RSPH1Q8WYR4 309 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 PGBD4Q96DM1 585 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 CPB2Q96IY4 423 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 GBP4Q96PP9 640 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 MRPL4Q9BYD3 311 aaKnown RBP13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 TMEM134Q9H6X4 195 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 ELAC1Q9H777 363 aaKnown RBP13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 FAM105AQ9NUU6 356 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 KBTBD4Q9NVX7 518 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 HPSEQ9Y251 543 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 COL4A6Q14031 1691 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 ADGRA3Q8IWK6 1321 aa13.07□□□□□ -0.32
SDHDP1-201ENST00000588055 A0A0U1RQF3 1178 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 ACKR2O00590 384 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 B4GALT5O43286 388 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 EOMESO95936 686 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 MYL1P05976 194 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 CA3P07451 260 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 ARF4P18085 180 aaPredicted RBP13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 NDUFA8P51970 172 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 NCKAP1LP55160 1127 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 ALCAMQ13740 583 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 DCAF4L1Q3SXM0 396 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 HERC4Q5GLZ8 1057 aaPredicted RBP13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 GPR153Q6NV75 609 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 SFR1Q86XK3 245 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 ECHDC2Q86YB7 292 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 CCDC47Q96A33 483 aaKnown RBP13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 TRAIPQ9BWF2 469 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 TRIM9Q9C026 710 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 CCDC113Q9H0I3 377 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 NKX2-4Q9H2Z4 354 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 FZD8Q9H461 694 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 MRPL44Q9H9J2 332 aaKnown RBP13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 PANK4Q9NVE7 773 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 HOOK1Q9UJC3 728 aaKnown RBP13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 TTC3P53804 2025 aa13.06□□□□□ -0.32
SDHDP1-201ENST00000588055 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 FAM237AA0A1B0GTK4 181 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 GOLGA6L22H0YM25 854 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 SOX1O00570 391 aaPredicted RBP13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 HNRNPDLO14979 420 aaKnown RBP13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 MAPTP10636 758 aaKnown RBP13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 PBX2P40425 430 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 MATR3P43243 847 aaKnown RBP eCLIP13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 AFMP43652 599 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 FXR1P51114 621 aaKnown RBP eCLIP13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 HTRA4P83105 476 aaPredicted RBP13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 FAM160A1Q05DH4 1040 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 BTG3Q14201 252 aaPredicted RBP13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 AMHR2Q16671 573 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 ATF7IP2Q5U623 682 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 KANK3Q6NY19 840 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 GLB1LQ6UWU2 654 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 HAUS6Q7Z4H7 955 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 RTN4RL1Q86UN2 441 aaPredicted RBP13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 TMEM161BQ8NDZ6 487 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 STAMQ92783 540 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 HVCN1Q96D96 273 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 LRCH3Q96II8 777 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 NTPCRQ9BSD7 190 aaKnown RBP13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 MRPL9Q9BYD2 267 aaKnown RBP13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 OLFML3Q9NRN5 406 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 SERTAD1Q9UHV2 236 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 RWDD3Q9Y3V2 267 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 PCDHB2Q9Y5E7 798 aa13.05□□□□□ -0.32
SDHDP1-201ENST00000588055 A0A1B0GUA9 196 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 TBKBP1A7MCY6 615 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 ACTN4O43707 911 aaKnown RBP13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 KINO60870 393 aaKnown RBP13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 DGKIO75912 1065 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 GCNT3O95395 438 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 NPTXRO95502 500 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms