RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 B4GALT4O60513 344 aa10.76□□□□□ -0.69
CIITA-208ENST00000572665 ACTN1P12814 892 aa10.76□□□□□ -0.69
CIITA-208ENST00000572665 COL8A1P27658 744 aa10.76□□□□□ -0.69
CIITA-208ENST00000572665 CYP2C18P33260 490 aa10.76□□□□□ -0.69
CIITA-208ENST00000572665 RPS6P62753 249 aaKnown RBP10.76□□□□□ -0.69
CIITA-208ENST00000572665 TRAF1Q13077 416 aa10.76□□□□□ -0.69
CIITA-208ENST00000572665 TTLL4Q14679 1199 aa10.76□□□□□ -0.69
CIITA-208ENST00000572665 SEZ6Q53EL9 994 aa10.76□□□□□ -0.69
CIITA-208ENST00000572665 SHISA2Q6UWI4 295 aa10.76□□□□□ -0.69
CIITA-208ENST00000572665 ZNF589Q86UQ0 364 aaPredicted RBP10.76□□□□□ -0.69
CIITA-208ENST00000572665 SEC16BQ96JE7 1060 aa10.76□□□□□ -0.69
CIITA-208ENST00000572665 PDGFCQ9NRA1 345 aa10.76□□□□□ -0.69
CIITA-208ENST00000572665 ABCB11O95342 1321 aa10.76□□□□□ -0.69
CIITA-208ENST00000572665 COL6A3P12111 3177 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 DHX16O60231 1041 aaKnown RBP10.75□□□□□ -0.69
CIITA-208ENST00000572665 MYL3P08590 195 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 ACRP10323 421 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 RFC2P35250 354 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 PURAQ00577 322 aaKnown RBP10.75□□□□□ -0.69
CIITA-208ENST00000572665 NUCB1Q02818 461 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 COL9A2Q14055 689 aaPredicted RBP10.75□□□□□ -0.69
CIITA-208ENST00000572665 WIPI1Q5MNZ9 446 aaPredicted RBP10.75□□□□□ -0.69
CIITA-208ENST00000572665 NFRKBQ6P4R8 1299 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 LRFN4Q6PJG9 635 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 CWC27Q6UX04 472 aaKnown RBP10.75□□□□□ -0.69
CIITA-208ENST00000572665 PLPPR2Q96GM1 343 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 DRC1Q96MC2 740 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 UBAC1Q9BSL1 405 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 DSCC1Q9BVC3 393 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 ALDH8A1Q9H2A2 487 aaPredicted RBP10.75□□□□□ -0.69
CIITA-208ENST00000572665 SLC28A3Q9HAS3 691 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 EFR3BQ9Y2G0 817 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 MRPL11Q9Y3B7 192 aaKnown RBP10.75□□□□□ -0.69
CIITA-208ENST00000572665 SLC4A7Q9Y6M7 1214 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 TNKSO95271 1327 aa10.75□□□□□ -0.69
CIITA-208ENST00000572665 PARP1P09874 1014 aaKnown RBP10.74□□□□□ -0.69
CIITA-208ENST00000572665 SLFN14P0C7P3 912 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 TXNP10599 105 aaKnown RBP10.74□□□□□ -0.69
CIITA-208ENST00000572665 EDNRBP24530 442 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 SOX9P48436 509 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 CCL23P55773 120 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 TRDNQ13061 729 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 BFSP2Q13515 415 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 INPP5AQ14642 412 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 STXBP2Q15833 593 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 USH1GQ495M9 461 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 FAM47CQ5HY64 1035 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 SLC30A10Q6XR72 485 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 C16orf59Q7L2K0 433 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 RASGRP2Q7LDG7 609 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 TBC1D10CQ8IV04 446 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 NSUN6Q8TEA1 469 aaKnown RBP10.74□□□□□ -0.69
CIITA-208ENST00000572665 CLEC4DQ8WXI8 215 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 ANKS1AQ92625 1134 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 IWS1Q96ST2 819 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 SUGCTQ9HAC7 445 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 RAD18Q9NS91 495 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 MAP3K20Q9NYL2 800 aaKnown RBP10.74□□□□□ -0.69
CIITA-208ENST00000572665 KIAA1217Q5T5P2 1943 aa10.74□□□□□ -0.69
CIITA-208ENST00000572665 GBF1Q92538 1859 aa10.73□□□□□ -0.69
CIITA-208ENST00000572665 GFRA2O00451 464 aa10.73□□□□□ -0.69
CIITA-208ENST00000572665 PARNO95453 639 aaKnown RBP10.73□□□□□ -0.69
CIITA-208ENST00000572665 NASPP49321 788 aaPredicted RBP10.73□□□□□ -0.69
CIITA-208ENST00000572665 PSMC6P62333 389 aa10.73□□□□□ -0.69
CIITA-208ENST00000572665 CDC37Q16543 378 aaPredicted RBP10.73□□□□□ -0.69
CIITA-208ENST00000572665 ZC3H12AQ5D1E8 599 aaKnown RBP10.73□□□□□ -0.69
CIITA-208ENST00000572665 OTOP2Q7RTS6 562 aa10.73□□□□□ -0.69
CIITA-208ENST00000572665 TMEM130Q8N3G9 435 aa10.73□□□□□ -0.69
CIITA-208ENST00000572665 SAMD3Q8N6K7 520 aa10.73□□□□□ -0.69
CIITA-208ENST00000572665 RUFY2Q8WXA3 655 aa10.73□□□□□ -0.69
CIITA-208ENST00000572665 KATNAL1Q9BW62 490 aa10.73□□□□□ -0.69
CIITA-208ENST00000572665 TRPV6Q9H1D0 765 aa10.73□□□□□ -0.69
CIITA-208ENST00000572665 GRIN2DO15399 1336 aa10.73□□□□□ -0.69
CIITA-208ENST00000572665 NEDD4P46934 1319 aa10.73□□□□□ -0.69
CIITA-208ENST00000572665 SCN10AQ9Y5Y9 1956 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 ERICH2A1L162 156 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 B4E1Z4 1266 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 KIF28PB7ZC32 967 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 F8W735 103 aaPredicted RBP10.72□□□□□ -0.69
CIITA-208ENST00000572665 TMPRSS2O15393 492 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 GH1P01241 217 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 GOLGA8HP0CJ92 632 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 CASTP20810 708 aaKnown RBP10.72□□□□□ -0.69
CIITA-208ENST00000572665 IFIT1BQ5T764 474 aaKnown RBP10.72□□□□□ -0.69
CIITA-208ENST00000572665 ARHGEF16Q5VV41 709 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 KCNV1Q6PIU1 500 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 HDXQ7Z353 690 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 ADGRF4Q8IZF3 695 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 SMG8Q8ND04 991 aaKnown RBP10.72□□□□□ -0.69
CIITA-208ENST00000572665 ELMO3Q96BJ8 720 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 SLC9A7Q96T83 725 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 AMNQ9BXJ7 453 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 UBA5Q9GZZ9 404 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 BRMS1Q9HCU9 246 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 POLR3KQ9Y2Y1 108 aaPredicted RBP10.72□□□□□ -0.69
CIITA-208ENST00000572665 PCDHA11Q9Y5I1 949 aa10.72□□□□□ -0.69
CIITA-208ENST00000572665 EIF3JO75822 258 aaKnown RBP10.71□□□□□ -0.69
CIITA-208ENST00000572665 ATP2A2P16615 1042 aaKnown RBP10.71□□□□□ -0.69
CIITA-208ENST00000572665 ID3Q02535 119 aa10.71□□□□□ -0.69
CIITA-208ENST00000572665 SART3Q15020 963 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms