RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 MANFP55145 182 aaKnown RBP5.97□□□□□ -1.45
CHD9-215ENST00000565442 ADCY2Q08462 1091 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 DUSP8Q13202 625 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 MOGSQ13724 837 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 NOLC1Q14978 699 aaKnown RBP eCLIP5.97□□□□□ -1.45
CHD9-215ENST00000565442 PCBP2Q15366 365 aaKnown RBP eCLIP5.97□□□□□ -1.45
CHD9-215ENST00000565442 CLUL1Q15846 466 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 ZNF808Q8N4W9 903 aaPredicted RBP5.97□□□□□ -1.45
CHD9-215ENST00000565442 C1orf162Q8NEQ5 155 aaPredicted RBP5.97□□□□□ -1.45
CHD9-215ENST00000565442 CALML6Q8TD86 181 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 FERMT2Q96AC1 680 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 CHMP4CQ96CF2 233 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 EAF2Q96CJ1 260 aaPredicted RBP5.97□□□□□ -1.45
CHD9-215ENST00000565442 HOOK2Q96ED9 719 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 FAXDC2Q96IV6 333 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 ACAP3Q96P50 834 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 MKS1Q9NXB0 559 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 EDARQ9UNE0 448 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 SPEF1Q9Y4P9 236 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 PPP2R3BQ9Y5P8 575 aa5.97□□□□□ -1.45
CHD9-215ENST00000565442 CFBP00751 764 aa5.96□□□□□ -1.46
CHD9-215ENST00000565442 ENPP1P22413 925 aa5.96□□□□□ -1.46
CHD9-215ENST00000565442 RAB27AP51159 221 aa5.96□□□□□ -1.46
CHD9-215ENST00000565442 FSCN1Q16658 493 aaKnown RBP5.96□□□□□ -1.46
CHD9-215ENST00000565442 UGT8Q16880 541 aa5.96□□□□□ -1.46
CHD9-215ENST00000565442 KIAA1841Q6NSI8 718 aa5.96□□□□□ -1.46
CHD9-215ENST00000565442 ZNF627Q7L945 461 aa5.96□□□□□ -1.46
CHD9-215ENST00000565442 AMOTL1Q8IY63 956 aa5.96□□□□□ -1.46
CHD9-215ENST00000565442 WDR48Q8TAF3 677 aa5.96□□□□□ -1.46
CHD9-215ENST00000565442 BTBD2Q9BX70 525 aa5.96□□□□□ -1.46
CHD9-215ENST00000565442 PLA2G12BQ9BX93 195 aa5.96□□□□□ -1.46
CHD9-215ENST00000565442 QRSL1Q9H0R6 528 aaKnown RBP5.96□□□□□ -1.46
CHD9-215ENST00000565442 OR10A5Q9H207 317 aa5.96□□□□□ -1.46
CHD9-215ENST00000565442 CCM2LQ9NUG4 571 aaPredicted RBP5.96□□□□□ -1.46
CHD9-215ENST00000565442 DNAJC28Q9NX36 388 aa5.96□□□□□ -1.46
CHD9-215ENST00000565442 TCEAL9Q9UHQ7 104 aa5.96□□□□□ -1.46
CHD9-215ENST00000565442 ST20-MTHFSA0A0A6YYL1 179 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 FZD9O00144 591 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 AKAP10O43572 662 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 CUTAO60888 179 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 PCDH8O95206 1070 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 LPLP06858 475 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 LMO1P25800 156 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 POLD1P28340 1107 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 IL13RA1P78552 427 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 SRSF2Q01130 221 aaKnown RBP5.95□□□□□ -1.46
CHD9-215ENST00000565442 ZMAT1Q5H9K5 638 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 PITRM1Q5JRX3 1037 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 TOR2AQ5JU69 321 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 KANSL1Q7Z3B3 1105 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 FMNL3Q8IVF7 1028 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 PRDM12Q9H4Q4 367 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 CHPF2Q9P2E5 772 aa5.95□□□□□ -1.46
CHD9-215ENST00000565442 LUC7L2Q9Y383 392 aaKnown RBP5.95□□□□□ -1.46
CHD9-215ENST00000565442 XPOTO43592 962 aaKnown RBP5.94□□□□□ -1.46
CHD9-215ENST00000565442 PCDHGA12O60330 932 aa5.94□□□□□ -1.46
CHD9-215ENST00000565442 APEX1P27695 318 aaKnown RBP5.94□□□□□ -1.46
CHD9-215ENST00000565442 CD83Q01151 205 aa5.94□□□□□ -1.46
CHD9-215ENST00000565442 ACAP2Q15057 778 aa5.94□□□□□ -1.46
CHD9-215ENST00000565442 LRRC41Q15345 812 aa5.94□□□□□ -1.46
CHD9-215ENST00000565442 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.94□□□□□ -1.46
CHD9-215ENST00000565442 PNMA8AQ86V59 439 aaPredicted RBP5.94□□□□□ -1.46
CHD9-215ENST00000565442 RPGRQ92834 1020 aaKnown RBP5.94□□□□□ -1.46
CHD9-215ENST00000565442 ORAI2Q96SN7 254 aa5.94□□□□□ -1.46
CHD9-215ENST00000565442 MTG2Q9H4K7 406 aa5.94□□□□□ -1.46
CHD9-215ENST00000565442 ZNF703Q9H7S9 590 aaPredicted RBP5.94□□□□□ -1.46
CHD9-215ENST00000565442 AURKAIP1Q9NWT8 199 aaPredicted RBP5.94□□□□□ -1.46
CHD9-215ENST00000565442 ZIM2Q9NZV7 527 aa5.94□□□□□ -1.46
CHD9-215ENST00000565442 PCDHGA9Q9Y5G4 932 aaKnown RBP5.94□□□□□ -1.46
CHD9-215ENST00000565442 PCDHGA8Q9Y5G5 932 aa5.94□□□□□ -1.46
CHD9-215ENST00000565442 PCDHGA7Q9Y5G6 932 aa5.94□□□□□ -1.46
CHD9-215ENST00000565442 PCDHGA6Q9Y5G7 932 aa5.94□□□□□ -1.46
CHD9-215ENST00000565442 PCDHGA3Q9Y5H0 932 aa5.94□□□□□ -1.46
CHD9-215ENST00000565442 PCDHGA2Q9Y5H1 932 aa5.94□□□□□ -1.46
CHD9-215ENST00000565442 MYPNQ86TC9 1320 aa5.94□□□□□ -1.46
CHD9-215ENST00000565442 TRIM75PA6NK02 468 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 MATN2O00339 956 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 RAMP2O60895 175 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 SNUPNO95149 360 aaKnown RBP5.93□□□□□ -1.46
CHD9-215ENST00000565442 RBP3P10745 1247 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 OSMP13725 252 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 HIBADHP31937 336 aaKnown RBP5.93□□□□□ -1.46
CHD9-215ENST00000565442 RPS19P39019 145 aaKnown RBP5.93□□□□□ -1.46
CHD9-215ENST00000565442 ADCY8P40145 1251 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 RRADP55042 308 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 TOP3AQ13472 1001 aaPredicted RBP5.93□□□□□ -1.46
CHD9-215ENST00000565442 PIN1Q13526 163 aaPredicted RBP5.93□□□□□ -1.46
CHD9-215ENST00000565442 TRIM25Q14258 630 aaKnown RBP5.93□□□□□ -1.46
CHD9-215ENST00000565442 ODF1Q14990 250 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 PPP2R5AQ15172 486 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 STILQ15468 1287 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 NFE2Q16621 373 aaPredicted RBP5.93□□□□□ -1.46
CHD9-215ENST00000565442 WDR72Q3MJ13 1102 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 KANK2Q63ZY3 851 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 DPP8Q6V1X1 898 aaPredicted RBP5.93□□□□□ -1.46
CHD9-215ENST00000565442 TSR2Q969E8 191 aaKnown RBP5.93□□□□□ -1.46
CHD9-215ENST00000565442 CLIP3Q96DZ5 547 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 NAF1Q96HR8 494 aaKnown RBP5.93□□□□□ -1.46
CHD9-215ENST00000565442 PRRX2Q99811 253 aa5.93□□□□□ -1.46
CHD9-215ENST00000565442 SLC13A1Q9BZW2 595 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms