RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 NECTIN4Q96NY8 510 aa22.41■■□□□ 1.18
COTL1-204ENST00000564662 RSAD1Q9HA92 442 aa22.41■■□□□ 1.18
COTL1-204ENST00000564662 DZANK1Q9NVP4 752 aa22.41■■□□□ 1.18
COTL1-204ENST00000564662 ORC3Q9UBD5 711 aaPredicted RBP22.41■■□□□ 1.18
COTL1-204ENST00000564662 PPME1Q9Y570 386 aa22.41■■□□□ 1.18
COTL1-204ENST00000564662 C2CD4DB7Z1M9 353 aa22.4■■□□□ 1.18
COTL1-204ENST00000564662 CTDNEP1O95476 244 aa22.4■■□□□ 1.18
COTL1-204ENST00000564662 MTHFRP42898 656 aa22.4■■□□□ 1.18
COTL1-204ENST00000564662 SPIRE1Q08AE8 756 aa22.4■■□□□ 1.18
COTL1-204ENST00000564662 NR5A1Q13285 461 aa22.4■■□□□ 1.18
COTL1-204ENST00000564662 XKR9Q5GH70 373 aa22.4■■□□□ 1.18
COTL1-204ENST00000564662 KANK3Q6NY19 840 aa22.4■■□□□ 1.18
COTL1-204ENST00000564662 EXOC8Q8IYI6 725 aa22.4■■□□□ 1.18
COTL1-204ENST00000564662 RNF149Q8NC42 400 aa22.4■■□□□ 1.18
COTL1-204ENST00000564662 RIPOR3Q96MK2 946 aa22.4■■□□□ 1.18
COTL1-204ENST00000564662 VN1R3Q9BXE9 311 aa22.4■■□□□ 1.18
COTL1-204ENST00000564662 MYO10Q9HD67 2058 aa22.39■■□□□ 1.17
COTL1-204ENST00000564662 GAS2O43903 313 aaKnown RBP22.39■■□□□ 1.17
COTL1-204ENST00000564662 ERLIN2O94905 339 aa22.39■■□□□ 1.17
COTL1-204ENST00000564662 SSBP05455 408 aaKnown RBP eCLIP22.39■■□□□ 1.17
COTL1-204ENST00000564662 KRT2P35908 639 aa22.39■■□□□ 1.17
COTL1-204ENST00000564662 AFF1P51825 1210 aaKnown RBP22.39■■□□□ 1.17
COTL1-204ENST00000564662 AK2P54819 239 aa22.39■■□□□ 1.17
COTL1-204ENST00000564662 VCPP55072 806 aaKnown RBP22.39■■□□□ 1.17
COTL1-204ENST00000564662 GIT2Q14161 759 aa22.39■■□□□ 1.17
COTL1-204ENST00000564662 SLFN12Q8IYM2 578 aa22.39■■□□□ 1.17
COTL1-204ENST00000564662 KREMEN2Q8NCW0 462 aa22.39■■□□□ 1.17
COTL1-204ENST00000564662 TCP11Q8WWU5 503 aa22.39■■□□□ 1.17
COTL1-204ENST00000564662 PHOX2BQ99453 314 aa22.39■■□□□ 1.17
COTL1-204ENST00000564662 MTRQ99707 1265 aa22.39■■□□□ 1.17
COTL1-204ENST00000564662 IRAK3Q9Y616 596 aa22.39■■□□□ 1.17
COTL1-204ENST00000564662 CNTNAP2Q9UHC6 1331 aa22.38■■□□□ 1.17
COTL1-204ENST00000564662 SPDYE4A6NLX3 237 aa22.38■■□□□ 1.17
COTL1-204ENST00000564662 ZBTB39O15060 712 aa22.38■■□□□ 1.17
COTL1-204ENST00000564662 DDHD2O94830 711 aa22.38■■□□□ 1.17
COTL1-204ENST00000564662 BAG4O95429 457 aaKnown RBP22.38■■□□□ 1.17
COTL1-204ENST00000564662 PTPN14Q15678 1187 aa22.38■■□□□ 1.17
COTL1-204ENST00000564662 UBXN11Q5T124 520 aa22.38■■□□□ 1.17
COTL1-204ENST00000564662 KIAA1841Q6NSI8 718 aa22.38■■□□□ 1.17
COTL1-204ENST00000564662 OTUD6AQ7L8S5 288 aa22.38■■□□□ 1.17
COTL1-204ENST00000564662 FERMT3Q86UX7 667 aa22.38■■□□□ 1.17
COTL1-204ENST00000564662 WASF1Q92558 559 aa22.38■■□□□ 1.17
COTL1-204ENST00000564662 FAM193BQ96PV7 902 aaPredicted RBP22.38■■□□□ 1.17
COTL1-204ENST00000564662 ZSWIM4Q9H7M6 989 aa22.38■■□□□ 1.17
COTL1-204ENST00000564662 BRMS1Q9HCU9 246 aa22.38■■□□□ 1.17
COTL1-204ENST00000564662 SORCS3Q9UPU3 1222 aa22.38■■□□□ 1.17
COTL1-204ENST00000564662 PDGFBP01127 241 aaPredicted RBP22.37■■□□□ 1.17
COTL1-204ENST00000564662 POMCP01189 267 aa22.37■■□□□ 1.17
COTL1-204ENST00000564662 HOXA11P31270 313 aaPredicted RBP22.37■■□□□ 1.17
COTL1-204ENST00000564662 FOSBP53539 338 aa22.37■■□□□ 1.17
COTL1-204ENST00000564662 PTPN5P54829 565 aa22.37■■□□□ 1.17
COTL1-204ENST00000564662 MTMR3Q13615 1198 aa22.37■■□□□ 1.17
COTL1-204ENST00000564662 MRPL10Q7Z7H8 261 aaKnown RBP22.37■■□□□ 1.17
COTL1-204ENST00000564662 TPH2Q8IWU9 490 aa22.37■■□□□ 1.17
COTL1-204ENST00000564662 TDRD5Q8NAT2 981 aaKnown RBP22.37■■□□□ 1.17
COTL1-204ENST00000564662 SLC22A17Q8WUG5 538 aa22.37■■□□□ 1.17
COTL1-204ENST00000564662 DBR1Q9UK59 544 aaKnown RBP22.37■■□□□ 1.17
COTL1-204ENST00000564662 LARGE1O95461 756 aa22.36■■□□□ 1.17
COTL1-204ENST00000564662 ANKRD1Q15327 319 aa22.36■■□□□ 1.17
COTL1-204ENST00000564662 TMC5Q6UXY8 1006 aa22.36■■□□□ 1.17
COTL1-204ENST00000564662 CABP7Q86V35 215 aa22.36■■□□□ 1.17
COTL1-204ENST00000564662 NECAB1Q8N987 351 aa22.36■■□□□ 1.17
COTL1-204ENST00000564662 FEZF2Q8TBJ5 459 aa22.36■■□□□ 1.17
COTL1-204ENST00000564662 PRRX2Q99811 253 aa22.36■■□□□ 1.17
COTL1-204ENST00000564662 XPNPEP1Q9NQW7 623 aa22.36■■□□□ 1.17
COTL1-204ENST00000564662 PIEZO1Q92508 2521 aa22.36■■□□□ 1.17
COTL1-204ENST00000564662 ASAP2O43150 1006 aa22.35■■□□□ 1.17
COTL1-204ENST00000564662 TSPAN1O60635 241 aa22.35■■□□□ 1.17
COTL1-204ENST00000564662 BRD1O95696 1058 aa22.35■■□□□ 1.17
COTL1-204ENST00000564662 FDPSP14324 419 aaKnown RBP22.35■■□□□ 1.17
COTL1-204ENST00000564662 NCLP19338 710 aaKnown RBP22.35■■□□□ 1.17
COTL1-204ENST00000564662 SMG8Q8ND04 991 aaKnown RBP22.35■■□□□ 1.17
COTL1-204ENST00000564662 TNFRSF25Q93038 417 aa22.35■■□□□ 1.17
COTL1-204ENST00000564662 CPB2Q96IY4 423 aa22.35■■□□□ 1.17
COTL1-204ENST00000564662 CCDC43Q96MW1 224 aaKnown RBP22.35■■□□□ 1.17
COTL1-204ENST00000564662 EIF2AK1Q9BQI3 630 aaKnown RBP22.35■■□□□ 1.17
COTL1-204ENST00000564662 TMEM175Q9BSA9 504 aa22.35■■□□□ 1.17
COTL1-204ENST00000564662 EIF2AQ9BY44 585 aaKnown RBP22.35■■□□□ 1.17
COTL1-204ENST00000564662 SMOC2Q9H3U7 446 aa22.35■■□□□ 1.17
COTL1-204ENST00000564662 SFXN1Q9H9B4 322 aa22.35■■□□□ 1.17
COTL1-204ENST00000564662 KANSL3Q9P2N6 904 aa22.35■■□□□ 1.17
COTL1-204ENST00000564662 FAN1Q9Y2M0 1017 aa22.35■■□□□ 1.17
COTL1-204ENST00000564662 PRG3Q9Y2Y8 225 aaPredicted RBP22.35■■□□□ 1.17
COTL1-204ENST00000564662 IPPQ9Y573 584 aa22.35■■□□□ 1.17
COTL1-204ENST00000564662 ZDBF2Q9HCK1 2354 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 INO80B-WBP1J3KQ70 363 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 NRP1O14786 923 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 NEFLP07196 543 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 ASGR2P07307 311 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 ITGA4P13612 1032 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 KLRC2P26717 231 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 ANAPC15P60006 121 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 TCF15Q12870 199 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 CALCRLQ16602 461 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 ATAT1Q5SQI0 421 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 NOTUMQ6P988 496 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 PPFIBP1Q86W92 1011 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 EMILIN2Q9BXX0 1053 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 HES2Q9Y543 173 aa22.34■■□□□ 1.17
COTL1-204ENST00000564662 C2CD2LO14523 706 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms