RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 MIS18BP1Q6P0N0 1132 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 SPATA31D4Q6ZUB0 917 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 PALB2Q86YC2 1186 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 NLRP7Q8WX94 980 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 LPPQ93052 612 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 TMEM175Q9BSA9 504 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 CHRDQ9H2X0 955 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 CHST12Q9NRB3 414 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 KCNH7Q9NS40 1196 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 ANKFY1Q9P2R3 1169 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 TCEAL9Q9UHQ7 104 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 ZZEF1O43149 2961 aa10.82□□□□□ -0.68
HERC1-210ENST00000560897 ERICH2A1L162 156 aa10.82□□□□□ -0.68
HERC1-210ENST00000560897 DDX39AO00148 427 aaKnown RBP10.82□□□□□ -0.68
HERC1-210ENST00000560897 MAN2B1O00754 1011 aa10.82□□□□□ -0.68
HERC1-210ENST00000560897 CYTH3O43739 400 aa10.82□□□□□ -0.68
HERC1-210ENST00000560897 TDGF1P13385 188 aa10.82□□□□□ -0.68
HERC1-210ENST00000560897 DARSP14868 501 aaKnown RBP10.82□□□□□ -0.68
HERC1-210ENST00000560897 RAB27AP51159 221 aa10.82□□□□□ -0.68
HERC1-210ENST00000560897 ZNF252P-AS1Q0IIN9 211 aa10.82□□□□□ -0.68
HERC1-210ENST00000560897 NMIQ13287 307 aaPredicted RBP10.82□□□□□ -0.68
HERC1-210ENST00000560897 SF3A2Q15428 464 aaKnown RBP10.82□□□□□ -0.68
HERC1-210ENST00000560897 IMMTQ16891 758 aaKnown RBP10.82□□□□□ -0.68
HERC1-210ENST00000560897 TRMT1LQ7Z2T5 733 aaKnown RBP10.82□□□□□ -0.68
HERC1-210ENST00000560897 MAP4K1Q92918 833 aa10.82□□□□□ -0.68
HERC1-210ENST00000560897 PGBD4Q96DM1 585 aa10.82□□□□□ -0.68
HERC1-210ENST00000560897 RRP36Q96EU6 259 aaKnown RBP10.82□□□□□ -0.68
HERC1-210ENST00000560897 KXD1Q9BQD3 176 aa10.82□□□□□ -0.68
HERC1-210ENST00000560897 LSM14BQ9BX40 385 aaKnown RBP10.82□□□□□ -0.68
HERC1-210ENST00000560897 PSTPIP2Q9H939 334 aa10.82□□□□□ -0.68
HERC1-210ENST00000560897 SDK1Q7Z5N4 2213 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 GCN1Q92616 2671 aaKnown RBP10.81□□□□□ -0.68
HERC1-210ENST00000560897 CHURC1-FNTBB4DL54 471 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 TM4SF5O14894 197 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 C1RP00736 705 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 FGFR4P22455 802 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 SFPQP23246 707 aaKnown RBP eCLIP10.81□□□□□ -0.68
HERC1-210ENST00000560897 CXCL12P48061 93 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 FNTBP49356 437 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 LIN9Q5TKA1 542 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 RNF43Q68DV7 783 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 EFCAB12Q6NXP0 572 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 MAMSTRQ6ZN01 415 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 GRASPQ7Z6J2 395 aaPredicted RBP10.81□□□□□ -0.68
HERC1-210ENST00000560897 LONP2Q86WA8 852 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 FAM160A2Q8N612 972 aaPredicted RBP10.81□□□□□ -0.68
HERC1-210ENST00000560897 OTUD7AQ8TE49 926 aaPredicted RBP10.81□□□□□ -0.68
HERC1-210ENST00000560897 FGF13Q92913 245 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 ZNF668Q96K58 619 aaPredicted RBP10.81□□□□□ -0.68
HERC1-210ENST00000560897 MXRA8Q9BRK3 442 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 ARRDC1-AS1Q9H2J1 176 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 ADAMTS10Q9H324 1103 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 HEBP1Q9NRV9 189 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.81□□□□□ -0.68
HERC1-210ENST00000560897 KANSL3Q9P2N6 904 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 POLIQ9UNA4 740 aa10.81□□□□□ -0.68
HERC1-210ENST00000560897 PRG3Q9Y2Y8 225 aaPredicted RBP10.81□□□□□ -0.68
HERC1-210ENST00000560897 IGKV6D-21A0A0A0MT36 114 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 ZBTB42B2RXF5 422 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 AXIN1O15169 862 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 TGM5O43548 720 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 HRO43593 1189 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 XYLBO75191 536 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 NR1I2O75469 434 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 OFD1O75665 1012 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 ATG7O95352 703 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 ZNF806P0C7X5 589 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 NCLP19338 710 aaKnown RBP10.8□□□□□ -0.68
HERC1-210ENST00000560897 SPINK2P20155 84 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 GPC3P51654 580 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 CREMQ03060 361 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 SLC35G1Q2M3R5 365 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 SWSAP1Q6NVH7 229 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 TICAM2Q86XR7 235 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 ZNF280BQ86YH2 543 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 GLYCTKQ8IVS8 523 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 CCDC60Q8IWA6 550 aaPredicted RBP10.8□□□□□ -0.68
HERC1-210ENST00000560897 LRRC71Q8N4P6 559 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 DNASE1L2Q92874 299 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 GCOM2Q9BZD3 368 aaPredicted RBP10.8□□□□□ -0.68
HERC1-210ENST00000560897 RXFP1Q9HBX9 757 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 FAM105AQ9NUU6 356 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 PCDHA6Q9UN73 950 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 PIN4Q9Y237 131 aaKnown RBP10.8□□□□□ -0.68
HERC1-210ENST00000560897 PCDHA8Q9Y5H6 950 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 DOCK6Q96HP0 2047 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 F5P12259 2224 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 SPAG17Q6Q759 2223 aa10.8□□□□□ -0.68
HERC1-210ENST00000560897 NRP1O14786 923 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 ZMYND10O75800 440 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 PAPLNO95428 1278 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 OR1G1P47890 313 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 SATB1Q01826 763 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 DSG1Q02413 1049 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 TRDNQ13061 729 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 SRSF5Q13243 272 aaKnown RBP10.79□□□□□ -0.68
HERC1-210ENST00000560897 SEC23AQ15436 765 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 CCDC6Q16204 474 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 UBE2SQ16763 222 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 HEATR6Q6AI08 1181 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms