RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 DYDC2Q96IM9 177 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 CEP170P1Q96L14 293 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 SCLT1Q96NL6 688 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 HSD17B14Q9BPX1 270 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 GCOM2Q9BZD3 368 aaPredicted RBP10.11□□□□□ -0.79
IDH3A-217ENST00000559889 AP5Z1O43299 807 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 PPP6R2O75170 966 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 SYKP43405 635 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 TOB1P50616 345 aaPredicted RBP10.11□□□□□ -0.79
IDH3A-217ENST00000559889 CYP4A11Q02928 519 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 CTTNQ14247 550 aaKnown RBP10.11□□□□□ -0.79
IDH3A-217ENST00000559889 CLLU1OSQ5K130 101 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 PTCRAQ6ISU1 281 aaPredicted RBP10.11□□□□□ -0.79
IDH3A-217ENST00000559889 ZNF410Q86VK4 478 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 SLC7A3Q8WY07 619 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 KHSRPQ92945 711 aaKnown RBP eCLIP10.11□□□□□ -0.793e-8■■■■□ 25.9
IDH3A-217ENST00000559889 TRAIPQ9BWF2 469 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 TMEM117Q9H0C3 514 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 CLDND1Q9NY35 253 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 PCDHA12Q9UN75 941 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 PCDHB6Q9Y5E3 794 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 PCDHGC5Q9Y5F6 944 aa10.11□□□□□ -0.79
IDH3A-217ENST00000559889 GOLGA6L19H0YKK7 550 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 BIN1O00499 593 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 LINC01565O15544 149 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 MARCH6O60337 910 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 DKC1O60832 514 aaKnown RBP eCLIP10.1□□□□□ -0.79
IDH3A-217ENST00000559889 CLCN1P35523 988 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 CALCRLQ16602 461 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 STX1AQ16623 288 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 SHC4Q6S5L8 630 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 C11orf57Q6ZUT1 292 aaPredicted RBP10.1□□□□□ -0.79
IDH3A-217ENST00000559889 FAM178BQ8IXR5 827 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 COLGALT1Q8NBJ5 622 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 SPC24Q8NBT2 197 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 PRPF31Q8WWY3 499 aaKnown RBP10.1□□□□□ -0.79
IDH3A-217ENST00000559889 TMEM143Q96AN5 459 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 NLRP4Q96MN2 994 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 ZNF830Q96NB3 372 aaPredicted RBP10.1□□□□□ -0.79
IDH3A-217ENST00000559889 EIF2AK1Q9BQI3 630 aaKnown RBP10.1□□□□□ -0.79
IDH3A-217ENST00000559889 JPH2Q9BR39 696 aaPredicted RBP10.1□□□□□ -0.79
IDH3A-217ENST00000559889 TMEM60Q9H2L4 133 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 ZSWIM4Q9H7M6 989 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 TTC12Q9H892 705 aaPredicted RBP10.1□□□□□ -0.79
IDH3A-217ENST00000559889 CHST12Q9NRB3 414 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 PPME1Q9Y570 386 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 BECN2A8MW95 431 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 NCK2O43639 380 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 NEMFO60524 1076 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 TBX10O75333 385 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 FGF18O76093 207 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 EOMESO95936 686 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 RFC5P40937 340 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 HS1BP3Q53T59 392 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 ISM2Q6H9L7 571 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 KRI1Q8N9T8 703 aaKnown RBP10.1□□□□□ -0.79
IDH3A-217ENST00000559889 MINDY3Q9H8M7 445 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 PCDHB12Q9Y5F1 795 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 COL4A3BPQ9Y5P4 624 aa10.1□□□□□ -0.79
IDH3A-217ENST00000559889 HOXA2O43364 376 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 LYPLA2O95372 231 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 TXKP42681 527 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 PHKA2P46019 1235 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 POLGP54098 1239 aaPredicted RBP10.09□□□□□ -0.79
IDH3A-217ENST00000559889 ERVFC1P60507 584 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 ADAM15Q13444 863 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 SPOUT1Q5T280 376 aaKnown RBP10.09□□□□□ -0.79
IDH3A-217ENST00000559889 EP400NLQ6ZTU2 488 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 TPH2Q8IWU9 490 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 TRIM5Q9C035 493 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 IGFLR1Q9H665 355 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 XPNPEP1Q9NQW7 623 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.09□□□□□ -0.79
IDH3A-217ENST00000559889 AAASQ9NRG9 546 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 BMP2KQ9NSY1 1161 aaPredicted RBP10.09□□□□□ -0.79
IDH3A-217ENST00000559889 ANO10Q9NW15 660 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 NOL7Q9UMY1 257 aaKnown RBP10.09□□□□□ -0.79
IDH3A-217ENST00000559889 PLXNA4Q9HCM2 1894 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 MEIS3P2A8K0S8 358 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 LAG3P18627 525 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 SFPQP23246 707 aaKnown RBP eCLIP10.09□□□□□ -0.79
IDH3A-217ENST00000559889 PBX3P40426 434 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 UBE3AQ05086 875 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 LAMTOR4Q0VGL1 99 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 EMC2Q15006 297 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 PUS10Q3MIT2 529 aaKnown RBP10.09□□□□□ -0.79
IDH3A-217ENST00000559889 OTUD6AQ7L8S5 288 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 DRC7Q8IY82 874 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 EXOC8Q8IYI6 725 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 LRRC43Q8N309 656 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 RNF169Q8NCN4 708 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 PSPC1Q8WXF1 523 aaKnown RBP10.09□□□□□ -0.79
IDH3A-217ENST00000559889 INO80BQ9C086 356 aaPredicted RBP10.09□□□□□ -0.79
IDH3A-217ENST00000559889 KIAA1468Q9P260 1216 aa10.09□□□□□ -0.79
IDH3A-217ENST00000559889 PIN4Q9Y237 131 aaKnown RBP10.09□□□□□ -0.79
IDH3A-217ENST00000559889 POTEMA6NI47 508 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 CUTAO60888 179 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 GLP2RO95838 553 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 SRGAP2CP0DJJ0 459 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 HOXA11P31270 313 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms