RNA–Protein interactions for RNA: ENST00000559778.5

CPNE6-213, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-213ENST00000559778 SIGLEC14Q08ET2 396 aa18.3■□□□□ 0.52
CPNE6-213ENST00000559778 MXD4Q14582 209 aaPredicted RBP18.3■□□□□ 0.52
CPNE6-213ENST00000559778 TPRNQ4KMQ1 711 aa18.3■□□□□ 0.52
CPNE6-213ENST00000559778 DDX53Q86TM3 631 aaKnown RBP18.3■□□□□ 0.52
CPNE6-213ENST00000559778 CNNM3Q8NE01 707 aa18.3■□□□□ 0.52
CPNE6-213ENST00000559778 IGSF21Q96ID5 467 aa18.3■□□□□ 0.52
CPNE6-213ENST00000559778 RPGRIP1Q96KN7 1286 aa18.3■□□□□ 0.52
CPNE6-213ENST00000559778 HSD17B14Q9BPX1 270 aa18.3■□□□□ 0.52
CPNE6-213ENST00000559778 ZBP1Q9H171 429 aa18.3■□□□□ 0.52
CPNE6-213ENST00000559778 NRDE2Q9H7Z3 1164 aa18.3■□□□□ 0.52
CPNE6-213ENST00000559778 HCFC2Q9Y5Z7 792 aa18.3■□□□□ 0.52
CPNE6-213ENST00000559778 MEIS3P2A8K0S8 358 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 NT5C1B-RDH14C9J2C7 533 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 GALTP07902 379 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 SRGAP2CP0DJJ0 459 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 AXLP30530 894 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 HOXA11P31270 313 aaPredicted RBP18.29■□□□□ 0.52
CPNE6-213ENST00000559778 NEK4P51957 841 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 RNASELQ05823 741 aaKnown RBP18.29■□□□□ 0.52
CPNE6-213ENST00000559778 ITIH3Q06033 890 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 TCF15Q12870 199 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 TRIM29Q14134 588 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 CTTNQ14247 550 aaKnown RBP18.29■□□□□ 0.52
CPNE6-213ENST00000559778 CALCRLQ16602 461 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 AGMOQ6ZNB7 445 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 IFNLR1Q8IU57 520 aaPredicted RBP18.29■□□□□ 0.52
CPNE6-213ENST00000559778 TPH2Q8IWU9 490 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 DIS3L2Q8IYB7 885 aaKnown RBP18.29■□□□□ 0.52
CPNE6-213ENST00000559778 VPS52Q8N1B4 723 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 RNF149Q8NC42 400 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 URGCPQ8TCY9 931 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 EIF2AK1Q9BQI3 630 aaKnown RBP18.29■□□□□ 0.52
CPNE6-213ENST00000559778 MINDY3Q9H8M7 445 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 ANKEF1Q9NU02 776 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 KANSL3Q9P2N6 904 aa18.29■□□□□ 0.52
CPNE6-213ENST00000559778 BTBD18B2RXH4 712 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 NEMFO60524 1076 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 DTNBO60941 627 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 CLASP2O75122 1294 aaKnown RBP18.28■□□□□ 0.52
CPNE6-213ENST00000559778 DGAT1O75907 488 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 CTSAP10619 480 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 NCLP19338 710 aaKnown RBP18.28■□□□□ 0.52
CPNE6-213ENST00000559778 TFDP1Q14186 410 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 UBXN11Q5T124 520 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 LLGL2Q6P1M3 1020 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 CCDC51Q96ER9 411 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 ASIC4Q96FT7 647 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 NECTIN4Q96NY8 510 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 TMEM175Q9BSA9 504 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 TTC12Q9H892 705 aaPredicted RBP18.28■□□□□ 0.52
CPNE6-213ENST00000559778 RSAD1Q9HA92 442 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 UBN1Q9NPG3 1134 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 XPNPEP1Q9NQW7 623 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 INPP5FQ9Y2H2 1132 aa18.28■□□□□ 0.52
CPNE6-213ENST00000559778 CFAP54Q96N23 3096 aa18.27■□□□□ 0.52
CPNE6-213ENST00000559778 ZBTB39O15060 712 aa18.27■□□□□ 0.52
CPNE6-213ENST00000559778 ERLIN2O94905 339 aa18.27■□□□□ 0.52
CPNE6-213ENST00000559778 CXCL14O95715 111 aa18.27■□□□□ 0.52
CPNE6-213ENST00000559778 XRCC6P12956 609 aaKnown RBP eCLIP18.27■□□□□ 0.52
CPNE6-213ENST00000559778 PTENP60484 403 aa18.27■□□□□ 0.52
CPNE6-213ENST00000559778 PTPN21Q16825 1174 aa18.27■□□□□ 0.52
CPNE6-213ENST00000559778 LONRF3Q496Y0 759 aa18.27■□□□□ 0.52
CPNE6-213ENST00000559778 CES5AQ6NT32 575 aa18.27■□□□□ 0.52
CPNE6-213ENST00000559778 TMEM173Q86WV6 379 aaPredicted RBP18.27■□□□□ 0.52
CPNE6-213ENST00000559778 MTMR9Q96QG7 549 aa18.27■□□□□ 0.52
CPNE6-213ENST00000559778 NFKBIZQ9BYH8 718 aa18.27■□□□□ 0.52
CPNE6-213ENST00000559778 ADAM7Q9H2U9 754 aa18.27■□□□□ 0.52
CPNE6-213ENST00000559778 BMP2KQ9NSY1 1161 aaPredicted RBP18.27■□□□□ 0.52
CPNE6-213ENST00000559778 DZANK1Q9NVP4 752 aa18.27■□□□□ 0.52
CPNE6-213ENST00000559778 DNAJB4Q9UDY4 337 aa18.27■□□□□ 0.52
CPNE6-213ENST00000559778 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.26■□□□□ 0.51
CPNE6-213ENST00000559778 INPPL1O15357 1258 aa18.26■□□□□ 0.51
CPNE6-213ENST00000559778 SLC11A1P49279 550 aa18.26■□□□□ 0.51
CPNE6-213ENST00000559778 VCPP55072 806 aaKnown RBP18.26■□□□□ 0.51
CPNE6-213ENST00000559778 NCBP1Q09161 790 aaKnown RBP18.26■□□□□ 0.51
CPNE6-213ENST00000559778 NOTUMQ6P988 496 aa18.26■□□□□ 0.51
CPNE6-213ENST00000559778 NR2E1Q9Y466 385 aa18.26■□□□□ 0.51
CPNE6-213ENST00000559778 ZFHX2Q9C0A1 2572 aaPredicted RBP18.25■□□□□ 0.51
CPNE6-213ENST00000559778 TSPAN1O60635 241 aa18.25■□□□□ 0.51
CPNE6-213ENST00000559778 JAK2O60674 1132 aa18.25■□□□□ 0.51
CPNE6-213ENST00000559778 TXKP42681 527 aa18.25■□□□□ 0.51
CPNE6-213ENST00000559778 MTHFRP42898 656 aa18.25■□□□□ 0.51
CPNE6-213ENST00000559778 RARRES1P49788 294 aa18.25■□□□□ 0.51
CPNE6-213ENST00000559778 PPFIBP1Q86W92 1011 aa18.25■□□□□ 0.51
CPNE6-213ENST00000559778 ZNF280BQ86YH2 543 aa18.25■□□□□ 0.51
CPNE6-213ENST00000559778 TMEM87AQ8NBN3 555 aa18.25■□□□□ 0.51
CPNE6-213ENST00000559778 BCL7CQ8WUZ0 217 aaPredicted RBP18.25■□□□□ 0.51
CPNE6-213ENST00000559778 CCDC43Q96MW1 224 aaKnown RBP18.25■□□□□ 0.51
CPNE6-213ENST00000559778 FAM193BQ96PV7 902 aaPredicted RBP18.25■□□□□ 0.51
CPNE6-213ENST00000559778 GBP3Q9H0R5 595 aa18.25■□□□□ 0.51
CPNE6-213ENST00000559778 SPTBN4Q9H254 2564 aa18.24■□□□□ 0.51
CPNE6-213ENST00000559778 B4GALT3O60512 393 aa18.24■□□□□ 0.51
CPNE6-213ENST00000559778 DDHD2O94830 711 aa18.24■□□□□ 0.51
CPNE6-213ENST00000559778 ALDH2P05091 517 aa18.24■□□□□ 0.51
CPNE6-213ENST00000559778 ITGA4P13612 1032 aa18.24■□□□□ 0.51
CPNE6-213ENST00000559778 CA8P35219 290 aa18.24■□□□□ 0.51
CPNE6-213ENST00000559778 ARL2P36404 184 aa18.24■□□□□ 0.51
CPNE6-213ENST00000559778 ST3GAL1Q11201 340 aa18.24■□□□□ 0.51
CPNE6-213ENST00000559778 ORC2Q13416 577 aaPredicted RBP18.24■□□□□ 0.51
CPNE6-213ENST00000559778 CAPSQ13938 189 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms