RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 STX8Q9UNK0 236 aa10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 MYH4Q9Y623 1939 aa10.52□□□□□ -0.72
GTF2A1-204ENST00000556268 RNGTTO60942 597 aaKnown RBP10.52□□□□□ -0.73
GTF2A1-204ENST00000556268 MYOGP15173 224 aa10.52□□□□□ -0.73
GTF2A1-204ENST00000556268 FOSL1P15407 271 aa10.52□□□□□ -0.73
GTF2A1-204ENST00000556268 SV2BQ7L1I2 683 aa10.52□□□□□ -0.73
GTF2A1-204ENST00000556268 ZNF765Q7L2R6 523 aa10.52□□□□□ -0.73
GTF2A1-204ENST00000556268 TICAM2Q86XR7 235 aa10.52□□□□□ -0.73
GTF2A1-204ENST00000556268 DTX1Q86Y01 620 aa10.52□□□□□ -0.73
GTF2A1-204ENST00000556268 PHOSPHO2Q8TCD6 241 aa10.52□□□□□ -0.73
GTF2A1-204ENST00000556268 TRMT13Q9NUP7 481 aaKnown RBP10.52□□□□□ -0.73
GTF2A1-204ENST00000556268 ADD3Q9UEY8 706 aaKnown RBP10.52□□□□□ -0.73
GTF2A1-204ENST00000556268 CCPG1Q9ULG6 757 aa10.52□□□□□ -0.73
GTF2A1-204ENST00000556268 SALL3Q9BXA9 1300 aa10.52□□□□□ -0.73
GTF2A1-204ENST00000556268 TSPY2A6NKD2 308 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 NFIBO00712 420 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 KPNA6O60684 536 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 FGAP02671 866 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 IQCF3P0C7M6 154 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 TOP1P11387 765 aaKnown RBP10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 CYP2C9P11712 490 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 ATP2A2P16615 1042 aaKnown RBP10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 EDNRBP24530 442 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 ALDH5A1P51649 535 aaPredicted RBP10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 PTPN11Q06124 597 aaPredicted RBP10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 IKQ13123 557 aaPredicted RBP10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 CDK5R2Q13319 367 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 LRRC14Q15048 493 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 VPS53Q5VIR6 699 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 NFRKBQ6P4R8 1299 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 NSMFQ6X4W1 530 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 RGS22Q8NE09 1264 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 CHMP4CQ96CF2 233 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 SCLYQ96I15 445 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 UHRF1Q96T88 793 aaPredicted RBP10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 TMEM47Q9BQJ4 181 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 MTG1Q9BT17 334 aaPredicted RBP10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 MAF1Q9H063 256 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 PNMA2Q9UL42 364 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 MTCH2Q9Y6C9 303 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 XIRP2A4UGR9 3374 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 TNKSO95271 1327 aa10.51□□□□□ -0.73
GTF2A1-204ENST00000556268 NKRFO15226 690 aaKnown RBP eCLIP10.5□□□□□ -0.731e-7■■□□□ 12.2
GTF2A1-204ENST00000556268 RANBP6O60518 1105 aaKnown RBP10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 RFC2P35250 354 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 SLC16A2P36021 539 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 CPT1AP50416 773 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 DAB2P98082 770 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 GPNMBQ14956 572 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 TMEM67Q5HYA8 995 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 SYDE2Q5VT97 1194 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 RASGRP2Q7LDG7 609 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 DNERQ8NFT8 737 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 ISL2Q96A47 359 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 TTC14Q96N46 770 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 FSD1Q9BTV5 496 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 HELLSQ9NRZ9 838 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 CYP8B1Q9UNU6 501 aa10.5□□□□□ -0.73
GTF2A1-204ENST00000556268 PRRC2BQ5JSZ5 2229 aaKnown RBP10.49□□□□□ -0.73
GTF2A1-204ENST00000556268 TRANK1O15050 2925 aa10.49□□□□□ -0.73
GTF2A1-204ENST00000556268 SNHG28P0DPA3 235 aa10.49□□□□□ -0.73
GTF2A1-204ENST00000556268 MX1P20591 662 aa10.49□□□□□ -0.73
GTF2A1-204ENST00000556268 PSMD2Q13200 908 aa10.49□□□□□ -0.73
GTF2A1-204ENST00000556268 MSMPQ1L6U9 139 aa10.49□□□□□ -0.73
GTF2A1-204ENST00000556268 MEI1Q5TIA1 1274 aa10.49□□□□□ -0.73
GTF2A1-204ENST00000556268 CCDC62Q6P9F0 684 aa10.49□□□□□ -0.73
GTF2A1-204ENST00000556268 ISY1Q9ULR0 285 aaKnown RBP10.49□□□□□ -0.73
GTF2A1-204ENST00000556268 PCDHA4Q9UN74 947 aa10.49□□□□□ -0.73
GTF2A1-204ENST00000556268 REV3LO60673 3130 aa10.49□□□□□ -0.73
GTF2A1-204ENST00000556268 EPOPA6NHQ4 379 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 RFXAPO00287 272 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 CYP26A1O43174 497 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 MYL3P08590 195 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 PDHBP11177 359 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 RPS6P62753 249 aaKnown RBP10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 CYP27A1Q02318 531 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 TFF2Q03403 129 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 TAP1Q03518 808 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 ZNF543Q08ER8 600 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 AAK1Q2M2I8 961 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 PPM1JQ5JR12 505 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 RNF207Q6ZRF8 634 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 SESTD1Q86VW0 696 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 RNF214Q8ND24 703 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 OR6J1Q8NGC5 347 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 SCFD2Q8WU76 684 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 EVI5LQ96CN4 794 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 CTAGE1Q96RT6 745 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 WDR19Q8NEZ3 1342 aa10.48□□□□□ -0.73
GTF2A1-204ENST00000556268 SCN10AQ9Y5Y9 1956 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 PTPDC1A2A3K4 754 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 LPXNO60711 386 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 CA3P07451 260 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 HSPD1P10809 573 aaKnown RBP10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 PCP11498 1178 aaKnown RBP10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 ACTN1P12814 892 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 NTF4P34130 210 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 TAGLNQ01995 201 aaKnown RBP10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 CCDC96Q2M329 555 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 MCMDC2Q4G0Z9 681 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms