RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SLC10A6Q3KNW5 377 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 TNNI3KQ59H18 835 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 SPDYAQ5MJ70 313 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 C1QTNF12Q5T7M4 302 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 LRCH2Q5VUJ6 765 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 ZKSCAN2Q63HK3 967 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 TOM1L2Q6ZVM7 507 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 RPAINQ86UA6 219 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 CREBRFQ8IUR6 639 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 DTX3Q8N9I9 347 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 PHOSPHO1Q8TCT1 267 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 WRNIP1Q96S55 665 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 CDK5RAP1Q96SZ6 601 aaKnown RBP5.21□□□□□ -1.58
ATXN3-227ENST00000554491 MRIQ9BWK5 157 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 RANBP17Q9H2T7 1088 aaKnown RBP5.21□□□□□ -1.58
ATXN3-227ENST00000554491 BARX1Q9HBU1 254 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-227ENST00000554491 TFCP2L1Q9NZI6 479 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 HSPBP1Q9NZL4 362 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 PRKAG3Q9UGI9 489 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 ADAM29Q9UKF5 820 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 ZBED9Q6R2W3 1325 aa5.21□□□□□ -1.58
ATXN3-227ENST00000554491 CCDC7Q96M83 1385 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 LTN1O94822 1766 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 ZNF623O75123 536 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 GJB6O95452 261 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 CNOT4O95628 575 aaKnown RBP5.2□□□□□ -1.58
ATXN3-227ENST00000554491 LTFP02788 710 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 SSBP05455 408 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATXN3-227ENST00000554491 TPM3P06753 285 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 TNNT3P45378 269 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-227ENST00000554491 SELENOPP49908 381 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 RHBDL3P58872 404 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 PPP2R2AP63151 447 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 GABPB1Q06547 395 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-227ENST00000554491 HSP90B2PQ58FF3 399 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 GET4Q7L5D6 327 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-227ENST00000554491 SMC1BQ8NDV3 1235 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 ATL2Q8NHH9 583 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 Q8TCH9 128 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 ERCC4Q92889 916 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-227ENST00000554491 ABHD8Q96I13 439 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 GNRHR2Q96P88 292 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 IER2Q9BTL4 223 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 SLC6A20Q9NP91 592 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 FAM208AQ9UK61 1670 aaKnown RBP5.2□□□□□ -1.58
ATXN3-227ENST00000554491 C4BP0C0L5 1744 aa5.2□□□□□ -1.58
ATXN3-227ENST00000554491 CCDC196A0A1B0GTZ2 297 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 A0A1W2PQU0 124 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 CCDC189A1A4V9 331 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 KRIT1O00522 736 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 CYR61O00622 381 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 FOXN1O15353 648 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 DLX3O60479 287 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 FZD7O75084 574 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 PPFIA4O75335 1185 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 KNG1P01042 644 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 CKMP06732 381 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 COL6A2P12110 1019 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 CAPN2P17655 700 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 GLRBP48167 497 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 NEXNQ0ZGT2 675 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 FXNQ16595 210 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 ICE2Q659A1 982 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 VASNQ6EMK4 673 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 Q6ZUG5 572 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 GPR155Q7Z3F1 870 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 TTLL11Q8NHH1 800 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 MORC4Q8TE76 937 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 PHF20Q9BVI0 1012 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 TEX13AQ9BXU3 409 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-227ENST00000554491 CAPN10Q9HC96 672 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 GPR27Q9NS67 375 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 POGKQ9P215 609 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 TCAF1Q9Y4C2 921 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 TELO2Q9Y4R8 837 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 THSD7BQ9C0I4 1608 aa5.19□□□□□ -1.58
ATXN3-227ENST00000554491 NFAT5O94916 1531 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 OVOL3O00110 214 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 MUSKO15146 869 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 MAFKO60675 156 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 GCP02774 474 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 CT47B1P0C2W7 299 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-227ENST00000554491 SETSIPP0DME0 302 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 PAX7P23759 505 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 RGS19P49795 217 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 MAP4K2Q12851 820 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 TUSC3Q13454 348 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 SMAD2Q15796 467 aaKnown RBP5.18□□□□□ -1.58
ATXN3-227ENST00000554491 SKIDA1Q1XH10 827 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 CYP4F22Q6NT55 531 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 USP53Q70EK8 1073 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 EEPD1Q7L9B9 569 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 RALYLQ86SE5 291 aaKnown RBP5.18□□□□□ -1.58
ATXN3-227ENST00000554491 TRIM48Q8IWZ4 208 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 STPG3Q8N7X2 389 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 KCTD13Q8WZ19 329 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 DLL4Q9NR61 685 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 ZFP69BQ9UJL9 534 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 HS3ST3A1Q9Y663 406 aa5.18□□□□□ -1.58
ATXN3-227ENST00000554491 KDM2BQ8NHM5 1336 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms