RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 CA14Q9ULX7 337 aa13.32□□□□□ -0.28
RBFOX1-214ENST00000552089 LHX6Q9UPM6 363 aa13.32□□□□□ -0.28
RBFOX1-214ENST00000552089 PCDHB12Q9Y5F1 795 aa13.32□□□□□ -0.28
RBFOX1-214ENST00000552089 PCDHA1Q9Y5I3 950 aa13.32□□□□□ -0.28
RBFOX1-214ENST00000552089 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.32□□□□□ -0.28
RBFOX1-214ENST00000552089 ABCB11O95342 1321 aa13.32□□□□□ -0.28
RBFOX1-214ENST00000552089 SMCO2A6NFE2 343 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 C1QTNF9BB2RNN3 333 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 C1QTNF9P0C862 333 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 SMIM10L2AP0DMW4 78 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 SMIM10L2BP0DMW5 78 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 HOXC8P31273 242 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 GATMP50440 423 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 AMPD3Q01432 767 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 MYL5Q02045 173 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 LAMC2Q13753 1193 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 PDIA5Q14554 519 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 FAM26DQ5JW98 314 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 RARS2Q5T160 578 aaKnown RBP13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 SPOUT1Q5T280 376 aaKnown RBP13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 N4BP2L1Q5TBK1 243 aaPredicted RBP13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 WWC2Q6AWC2 1192 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 PPP4R3AQ6IN85 833 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 XRRA1Q6P2D8 792 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 UNQ6494/PRO21346Q6UXR6 183 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 NPAS4Q8IUM7 802 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 DHX40Q8IX18 779 aaKnown RBP13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 BORCS6Q96GS4 357 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 LRRC27Q9C0I9 530 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 CSRNP2Q9H175 543 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 ENTPD7Q9NQZ7 604 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 TMEM260Q9NX78 707 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 GMEB2Q9UKD1 530 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 PCDHA6Q9UN73 950 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 PCDHA8Q9Y5H6 950 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 NBEAQ8NFP9 2946 aa13.31□□□□□ -0.28
RBFOX1-214ENST00000552089 HIDE1A8MVS5 230 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 HOXD8P13378 290 aaPredicted RBP13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 KIAA1841Q6NSI8 718 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 MOXD1Q6UVY6 613 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 NEK8Q86SG6 692 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 THNSL1Q8IYQ7 743 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 ENOX1Q8TC92 643 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 ATRIPQ8WXE1 791 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 LINC01599Q8WXQ3 324 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 ACSF2Q96CM8 615 aaPredicted RBP13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 CLIC6Q96NY7 704 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 TCF25Q9BQ70 676 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 EPC1Q9H2F5 836 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 KCNK12Q9HB15 430 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 RIC8AQ9NPQ8 531 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 COL20A1Q9P218 1284 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 WNT16Q9UBV4 365 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 MRPL11Q9Y3B7 192 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 SIT1Q9Y3P8 196 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 PCDHGA2Q9Y5H1 932 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 PCDHA5Q9Y5H7 936 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 BAZ2BQ9UIF8 2168 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 ACTN4O43707 911 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 CFBP00751 764 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 FOSP01100 380 aaPredicted RBP13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 TUBB4AP04350 444 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 USP11P51784 963 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 PLCB2Q00722 1185 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 RING1Q06587 406 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 LPIN1Q14693 890 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 ZNF528Q3MIS6 628 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 C4orf32Q8N8J7 132 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 GPKOWQ92917 476 aaPredicted RBP eCLIP13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 CUL5Q93034 780 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 CCDC47Q96A33 483 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 DDX41Q9UJV9 622 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 HCFC2Q9Y5Z7 792 aa13.3□□□□□ -0.28
RBFOX1-214ENST00000552089 BPTFQ12830 3046 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 TTC3P53804 2025 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 SORBS3O60504 671 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 CHRNA1P02708 482 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 HOXA13P31271 388 aaPredicted RBP13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 UBA7P41226 1012 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 ADCY7P51828 1080 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 SPEM2Q0P670 501 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 AP3B2Q13367 1082 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 MORC3Q14149 939 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 ZNF174Q15697 407 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 ATAT1Q5SQI0 421 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 RUFY4Q6ZNE9 571 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 DRC7Q8IY82 874 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 C12orf76Q8N812 135 aaPredicted RBP13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 KDF1Q8NAX2 398 aaPredicted RBP13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 DDX1Q92499 740 aaKnown RBP13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 TAAR1Q96RJ0 339 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 EHMT1Q9H9B1 1298 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 AAASQ9NRG9 546 aa13.29□□□□□ -0.28
RBFOX1-214ENST00000552089 PPFIA4O75335 1185 aa13.28□□□□□ -0.28
RBFOX1-214ENST00000552089 STAG3L1P0CL83 205 aa13.28□□□□□ -0.28
RBFOX1-214ENST00000552089 GLULP15104 373 aa13.28□□□□□ -0.28
RBFOX1-214ENST00000552089 MCM7P33993 719 aa13.28□□□□□ -0.28
RBFOX1-214ENST00000552089 TMEM266Q2M3C6 531 aa13.28□□□□□ -0.28
RBFOX1-214ENST00000552089 DPCR1Q3MIW9 517 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms