RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 CYP21A2P08686 494 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 MED14OSP0DP75 135 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 PLCD1P51178 756 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 GABPAQ06546 454 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 CREB3L3Q68CJ9 461 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 TATDN1Q6P1N9 297 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 C16orf86Q6ZW13 317 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 NLRX1Q86UT6 975 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 CRACR2BQ8N4Y2 399 aaPredicted RBP6.75□□□□□ -1.33
SCAF11-213ENST00000550629 C19orf47Q8N9M1 422 aaKnown RBP6.75□□□□□ -1.33
SCAF11-213ENST00000550629 CPLX3Q8WVH0 158 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 STAG1Q8WVM7 1258 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 CDCA5Q96FF9 252 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 CCDC17Q96LX7 622 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 CDADC1Q9BWV3 514 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 GLIS2Q9BZE0 524 aaPredicted RBP6.75□□□□□ -1.33
SCAF11-213ENST00000550629 SLC6A17Q9H1V8 727 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 PCDHB10Q9UN67 800 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 SLC12A7Q9Y666 1083 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 CDK5RAP2Q96SN8 1893 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 LAMA4Q16363 1823 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 FADS2P1A8MWK0 482 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 ETV2O00321 342 aaPredicted RBP6.74□□□□□ -1.33
SCAF11-213ENST00000550629 SLC27A2O14975 620 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 CBFA2T2O43439 604 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 HMGB1P09429 215 aaKnown RBP6.74□□□□□ -1.33
SCAF11-213ENST00000550629 INHBBP09529 407 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 CYP2D6P10635 497 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 GLDCP23378 1020 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 RBM25P49756 843 aaKnown RBP6.74□□□□□ -1.33
SCAF11-213ENST00000550629 RTP1P59025 263 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 PPP2R5EQ16537 467 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 GNPTABQ3T906 1256 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 RTP2Q5QGT7 225 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 AKNAD1Q5T1N1 836 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 MFSD6Q6ZSS7 791 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 IRF2BP1Q8IU81 584 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 SLC12A9Q9BXP2 914 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 ZNF341Q9BYN7 854 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 TM6SF1Q9BZW5 370 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 KRT23Q9C075 422 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 ERVK13-1Q9NX77 482 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 TNFRSF10DQ9UBN6 386 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 ZNF112Q9UJU3 913 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.74□□□□□ -1.33
SCAF11-213ENST00000550629 FHOD1Q9Y613 1164 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 LAMB1P07942 1786 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 WDR19Q8NEZ3 1342 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 PASKQ96RG2 1323 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 SSC5DA1L4H1 1573 aa6.74□□□□□ -1.33
SCAF11-213ENST00000550629 PLIN4Q96Q06 1357 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 CYP2D7A0A087X1C5 515 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 CTNND1O60716 968 aaKnown RBP6.73□□□□□ -1.33
SCAF11-213ENST00000550629 ENDOUP21128 410 aaKnown RBP6.73□□□□□ -1.33
SCAF11-213ENST00000550629 PSMA5P28066 241 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 ERCC5P28715 1186 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-213ENST00000550629 SHMT1P34896 483 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 LINC00310P59036 64 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 TRDNQ13061 729 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 CCDC178Q5BJE1 867 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 CWF19L1Q69YN2 538 aaKnown RBP6.73□□□□□ -1.33
SCAF11-213ENST00000550629 RALYLQ86SE5 291 aaKnown RBP6.73□□□□□ -1.33
SCAF11-213ENST00000550629 TBC1D10CQ8IV04 446 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 FIBCD1Q8N539 461 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 FAM169BQ8N8A8 192 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 ESR2Q92731 530 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 PLCD4Q9BRC7 762 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 MTA3Q9BTC8 594 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 C22orf23Q9BZE7 217 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 NOL6Q9H6R4 1146 aaKnown RBP6.73□□□□□ -1.33
SCAF11-213ENST00000550629 DNAJC18Q9H819 358 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.73□□□□□ -1.33
SCAF11-213ENST00000550629 SYNPO2Q9UMS6 1093 aa6.73□□□□□ -1.33
SCAF11-213ENST00000550629 SMG5Q9UPR3 1016 aaKnown RBP6.73□□□□□ -1.33
SCAF11-213ENST00000550629 GPR55Q9Y2T6 319 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-213ENST00000550629 PAPPA2Q9BXP8 1791 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 E7EWF7 191 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 TRAF5O00463 557 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 ASNSP08243 561 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 GSTM1P09488 218 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 ITGA4P13612 1032 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 ATF4P18848 351 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-213ENST00000550629 HAND2P61296 217 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 SLC7A5Q01650 507 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 KIR3DS1Q14943 382 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 TCEAL1Q15170 157 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 CERKLQ49MI3 558 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-213ENST00000550629 HSF5Q4G112 596 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-213ENST00000550629 TMEM179Q6ZVK1 233 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 ARMC9Q7Z3E5 817 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 ZNF605Q86T29 641 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 ANKRD13AQ8IZ07 590 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 ZNF444Q8N0Y2 327 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-213ENST00000550629 C2orf69Q8N8R5 385 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 TMEM52Q8NDY8 209 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.72□□□□□ -1.33
SCAF11-213ENST00000550629 NCOA7Q8NI08 942 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 KCNN1Q92952 543 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 DYNLL2Q96FJ2 89 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms