RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.16□□□□□ -1.9
YBX3-214ENST00000544501 PIK3C3Q8NEB9 887 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 SHCBP1Q8NEM2 672 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 SNX33Q8WV41 574 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 RELTQ969Z4 430 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 CHMP4CQ96CF2 233 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 SAMD11Q96NU1 681 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 LRRC37BQ96QE4 947 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 DPYSL5Q9BPU6 564 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 ACE2Q9BYF1 805 aaPredicted RBP3.16□□□□□ -1.9
YBX3-214ENST00000544501 C12orf65Q9H3J6 166 aaKnown RBP3.16□□□□□ -1.9
YBX3-214ENST00000544501 GREM2Q9H772 168 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 SCOCQ9UIL1 159 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 ZBTB21Q9ULJ3 1066 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 SLC30A1Q9Y6M5 507 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 TNKSO95271 1327 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 RPTORQ8N122 1335 aa3.16□□□□□ -1.9
YBX3-214ENST00000544501 BTBD11A6QL63 1104 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 PATE3B3GLJ2 98 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 GPR42O15529 346 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 TMEM127O75204 238 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 RAD17O75943 681 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 MT-CO1P00395 513 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 GYPEP15421 78 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 CCND1P24385 295 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 WASP42768 502 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 DUSP8Q13202 625 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 RIN1Q13671 783 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 UBE3CQ15386 1083 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 CLUL1Q15846 466 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 PTPN21Q16825 1174 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 KRT40Q6A162 431 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 TCTN3Q6NUS6 607 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 ADGRE4PQ86SQ3 457 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 GPR135Q8IZ08 494 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 CMTM4Q8IZR5 234 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 TTC9BQ8N6N2 239 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 GIMAP8Q8ND71 665 aaPredicted RBP3.15□□□□□ -1.91
YBX3-214ENST00000544501 GPR156Q8NFN8 814 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 DNERQ8NFT8 737 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 RPL10LQ96L21 214 aaKnown RBP3.15□□□□□ -1.91
YBX3-214ENST00000544501 GPHA2Q96T91 129 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 MPHOSPH9Q99550 1183 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 PTPN18Q99952 460 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 TCF7L1Q9HCS4 588 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 IL23AQ9NPF7 189 aa3.15□□□□□ -1.91
YBX3-214ENST00000544501 RBM12Q9NTZ6 932 aaKnown RBP3.15□□□□□ -1.91
YBX3-214ENST00000544501 ZFR2Q9UPR6 939 aaKnown RBP3.15□□□□□ -1.91
YBX3-214ENST00000544501 A0A1W2PRX2 142 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 E2F8A0AVK6 867 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 UBE2QL1A1L167 161 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 PCDHGA12O60330 932 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 FOXD2O60548 495 aaPredicted RBP3.14□□□□□ -1.91
YBX3-214ENST00000544501 PRAMEF4O60810 478 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 ALDH1L1O75891 902 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 OSMP13725 252 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 SYN1P17600 705 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 CRHR1P34998 444 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 MCAMP43121 646 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 RECQLP46063 649 aaPredicted RBP3.14□□□□□ -1.91
YBX3-214ENST00000544501 NEK2P51955 445 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 NPEPPSP55786 919 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 PLP2Q04941 152 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 DUSP2Q05923 314 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 MGAT2Q10469 447 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 SAFB2Q14151 953 aaKnown RBP eCLIP3.14□□□□□ -1.91
YBX3-214ENST00000544501 GRM7Q14831 915 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 ACAP2Q15057 778 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 PCBP2Q15366 365 aaKnown RBP eCLIP3.14□□□□□ -1.91
YBX3-214ENST00000544501 MST1LQ2TV78 715 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 HS1BP3Q53T59 392 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 TMEM240Q5SV17 173 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 EFCAB2Q5VUJ9 269 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 LILRA6Q6PI73 481 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 ABHD15Q6UXT9 468 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 LIMS2Q7Z4I7 341 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 POLNQ7Z5Q5 900 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 ZBTB46Q86UZ6 589 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 PNMA8AQ86V59 439 aaPredicted RBP3.14□□□□□ -1.91
YBX3-214ENST00000544501 KRTAP1-3Q8IUG1 177 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 MSL3Q8N5Y2 521 aaKnown RBP3.14□□□□□ -1.91
YBX3-214ENST00000544501 RIN2Q8WYP3 895 aaPredicted RBP3.14□□□□□ -1.91
YBX3-214ENST00000544501 JADE3Q92613 823 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 BORCS6Q96GS4 357 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 GNRHR2Q96P88 292 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 PUS7Q96PZ0 661 aaKnown RBP3.14□□□□□ -1.91
YBX3-214ENST00000544501 CAMKK2Q96RR4 588 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 BDH2Q9BUT1 245 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 ADI1Q9BV57 179 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 PLA2G12BQ9BX93 195 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 ENKD1Q9H0I2 346 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 AGO3Q9H9G7 860 aaKnown RBP3.14□□□□□ -1.91
YBX3-214ENST00000544501 ING3Q9NXR8 418 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 PLA2G3Q9NZ20 509 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 SAP30BPQ9UHR5 308 aaKnown RBP3.14□□□□□ -1.91
YBX3-214ENST00000544501 RCAN3Q9UKA8 241 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 PCDHGA9Q9Y5G4 932 aaKnown RBP3.14□□□□□ -1.91
YBX3-214ENST00000544501 PCDHGA8Q9Y5G5 932 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 PCDHGA7Q9Y5G6 932 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 PCDHGA6Q9Y5G7 932 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms