RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 ID4P47928 161 aa9.23□□□□□ -0.93
CLPB-211ENST00000542555 DLX2Q07687 328 aaPredicted RBP9.23□□□□□ -0.93
CLPB-211ENST00000542555 TRAF1Q13077 416 aa9.23□□□□□ -0.93
CLPB-211ENST00000542555 CDC37Q16543 378 aaPredicted RBP9.23□□□□□ -0.93
CLPB-211ENST00000542555 GNPTABQ3T906 1256 aa9.23□□□□□ -0.93
CLPB-211ENST00000542555 TPRNQ4KMQ1 711 aa9.23□□□□□ -0.93
CLPB-211ENST00000542555 CELF3Q5SZQ8 465 aaKnown RBP9.23□□□□□ -0.93
CLPB-211ENST00000542555 SPOUT1Q5T280 376 aaKnown RBP9.23□□□□□ -0.93
CLPB-211ENST00000542555 MCTP2Q6DN12 878 aa9.23□□□□□ -0.93
CLPB-211ENST00000542555 RASGRP2Q7LDG7 609 aa9.23□□□□□ -0.93
CLPB-211ENST00000542555 EFHBQ8N7U6 833 aa9.23□□□□□ -0.93
CLPB-211ENST00000542555 P2RX5Q93086 422 aa9.23□□□□□ -0.93
CLPB-211ENST00000542555 USP26Q9BXU7 913 aa9.23□□□□□ -0.93
CLPB-211ENST00000542555 TUT1Q9H6E5 874 aaKnown RBP9.23□□□□□ -0.93
CLPB-211ENST00000542555 ALG13Q9NP73 1137 aaKnown RBP9.23□□□□□ -0.93
CLPB-211ENST00000542555 TLR9Q9NR96 1032 aa9.23□□□□□ -0.93
CLPB-211ENST00000542555 ANAPC4Q9UJX5 808 aa9.23□□□□□ -0.93
CLPB-211ENST00000542555 TRANK1O15050 2925 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 LINC01565O15544 149 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 TREHO43280 583 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 SORBS3O60504 671 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 SMIM10L2AP0DMW4 78 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 SMIM10L2BP0DMW5 78 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 PCP11498 1178 aaKnown RBP9.22□□□□□ -0.93
CLPB-211ENST00000542555 CCND2P30279 289 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 ICAM3P32942 547 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 NRIP1P48552 1158 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 NOVP48745 357 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 RRP1P56182 461 aaKnown RBP9.22□□□□□ -0.93
CLPB-211ENST00000542555 ATP11AP98196 1134 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 COASYQ13057 564 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 MFSD6Q6ZSS7 791 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 RBM23Q86U06 439 aaKnown RBP9.22□□□□□ -0.93
CLPB-211ENST00000542555 SIRT2Q8IXJ6 389 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 WNT8BQ93098 351 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 NKD2Q969F2 451 aaPredicted RBP9.22□□□□□ -0.93
CLPB-211ENST00000542555 SEC62Q99442 399 aaKnown RBP9.22□□□□□ -0.93
CLPB-211ENST00000542555 RNF41Q9H4P4 317 aaPredicted RBP9.22□□□□□ -0.93
CLPB-211ENST00000542555 TLE6Q9H808 572 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 KAT14Q9H8E8 782 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 PXMP2Q9NR77 195 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 MAP3K20Q9NYL2 800 aaKnown RBP9.22□□□□□ -0.93
CLPB-211ENST00000542555 NR2E1Q9Y466 385 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 USP15Q9Y4E8 981 aaPredicted RBP9.22□□□□□ -0.93
CLPB-211ENST00000542555 TTC41PQ6P2S7 1318 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 XIRP2A4UGR9 3374 aa9.22□□□□□ -0.93
CLPB-211ENST00000542555 BRWD1Q9NSI6 2320 aa9.21□□□□□ -0.93
CLPB-211ENST00000542555 COL4A6Q14031 1691 aa9.21□□□□□ -0.93
CLPB-211ENST00000542555 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.21□□□□□ -0.94
CLPB-211ENST00000542555 PROB1E7EW31 1015 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 RPLP2P05387 115 aaKnown RBP9.21□□□□□ -0.94
CLPB-211ENST00000542555 GOLGA8HP0CJ92 632 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 ATF7P17544 494 aaPredicted RBP9.21□□□□□ -0.94
CLPB-211ENST00000542555 GTF2F1P35269 517 aaKnown RBP eCLIP9.21□□□□□ -0.94
CLPB-211ENST00000542555 ARHGAP4P98171 946 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 HNRNPUQ00839 825 aaKnown RBP eCLIP9.21□□□□□ -0.94
CLPB-211ENST00000542555 NEDD9Q14511 834 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 CBX2Q14781 532 aaPredicted RBP9.21□□□□□ -0.94
CLPB-211ENST00000542555 PTPN21Q16825 1174 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 HSDL1Q3SXM5 330 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 TTC39BQ5VTQ0 682 aaPredicted RBP9.21□□□□□ -0.94
CLPB-211ENST00000542555 ANKRD34AQ69YU3 496 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 IQCA1Q86XH1 822 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 SAMD3Q8N6K7 520 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 SMRP1Q8NCR6 262 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 OR13H1Q8NG92 308 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 ESR2Q92731 530 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 CLP1Q92989 425 aaKnown RBP9.21□□□□□ -0.94
CLPB-211ENST00000542555 MSLNLQ96KJ4 702 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 NEK1Q96PY6 1258 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 UBA5Q9GZZ9 404 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 MFSD1Q9H3U5 465 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 RNPEPQ9H4A4 650 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 VAT1LQ9HCJ6 419 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 PLAGL2Q9UPG8 496 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 PCDHB12Q9Y5F1 795 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 LCTP09848 1927 aa9.21□□□□□ -0.94
CLPB-211ENST00000542555 RALGAPA2Q2PPJ7 1873 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 M0QZ92 97 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 DDX3YO15523 660 aaKnown RBP9.2□□□□□ -0.94
CLPB-211ENST00000542555 LGALS2P05162 132 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 NT5C2P49902 561 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 VCPP55072 806 aaKnown RBP9.2□□□□□ -0.94
CLPB-211ENST00000542555 ASPRV1Q53RT3 343 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 FAM26DQ5JW98 314 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 TSHZ3Q63HK5 1081 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 PDE12Q6L8Q7 609 aaKnown RBP9.2□□□□□ -0.94
CLPB-211ENST00000542555 TAF2Q6P1X5 1199 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 UBALD2Q8IYN6 164 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 CMTR2Q8IYT2 770 aaKnown RBP9.2□□□□□ -0.94
CLPB-211ENST00000542555 ADGRF4Q8IZF3 695 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 ABI1Q8IZP0 508 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 POF1BQ8WVV4 589 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 PIK3R5Q8WYR1 880 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 TBC1D5Q92609 795 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 TNPO1Q92973 898 aaKnown RBP9.2□□□□□ -0.94
CLPB-211ENST00000542555 RIPOR3Q96MK2 946 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 CDCA3Q99618 268 aaPredicted RBP9.2□□□□□ -0.94
CLPB-211ENST00000542555 C16orf70Q9BSU1 422 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 AMNQ9BXJ7 453 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms