RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 LINC01465Q8N7H1 131 aa15.59■□□□□ 0.09
CYB561A3-216ENST00000540755 RETREG2Q8NC44 543 aa15.59■□□□□ 0.09
CYB561A3-216ENST00000540755 CACTINQ8WUQ7 758 aaKnown RBP15.59■□□□□ 0.09
CYB561A3-216ENST00000540755 TRAPPC12Q8WVT3 735 aa15.59■□□□□ 0.09
CYB561A3-216ENST00000540755 ZNF830Q96NB3 372 aaPredicted RBP15.59■□□□□ 0.09
CYB561A3-216ENST00000540755 SUGCTQ9HAC7 445 aa15.59■□□□□ 0.09
CYB561A3-216ENST00000540755 ARMCX3Q9UH62 379 aaPredicted RBP15.59■□□□□ 0.09
CYB561A3-216ENST00000540755 FRMD4BQ9Y2L6 1034 aa15.59■□□□□ 0.09
CYB561A3-216ENST00000540755 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.59■□□□□ 0.09
CYB561A3-216ENST00000540755 LRRIQ4A6NIV6 560 aa15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 ASAP2O43150 1006 aa15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 SFPQP23246 707 aaKnown RBP eCLIP15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 CLCN1P35523 988 aa15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 CASP4P49662 377 aa15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 CDCA2Q69YH5 1023 aaPredicted RBP15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 EFCAB12Q6NXP0 572 aa15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 TAS1R3Q7RTX0 852 aa15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 FAM186BQ8IYM0 893 aa15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 PRPF31Q8WWY3 499 aaKnown RBP15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 LENG1Q96BZ8 264 aaPredicted RBP15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 BORCS6Q96GS4 357 aa15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 ZMYND8Q9ULU4 1186 aaPredicted RBP15.58■□□□□ 0.08
CYB561A3-216ENST00000540755 A0A1W2PPC1 479 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 SOX1O00570 391 aaPredicted RBP15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 MAPK13O15264 365 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 SEPT4O43236 478 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 EXOC3O60645 756 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 PIGRP01833 764 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 KLRC1P26715 233 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 CYP2J2P51589 502 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 NKX3-2P78367 333 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 LAMTOR4Q0VGL1 99 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 STRN3Q13033 797 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 PPFIA1Q13136 1202 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 TFDP1Q14186 410 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 ARID5BQ14865 1188 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 GRIK4Q16099 956 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 MTHFD1LQ6UB35 978 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 PPFIBP1Q86W92 1011 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 LRRC71Q8N4P6 559 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 XXYLT1Q8NBI6 393 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 KAT2BQ92831 832 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 IQCDQ96DY2 449 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 GDF15Q99988 308 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 NUP58Q9BVL2 599 aa15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 UPF3AQ9H1J1 476 aaKnown RBP15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 SUCLA2Q9P2R7 463 aaPredicted RBP15.57■□□□□ 0.08
CYB561A3-216ENST00000540755 RRN3P2A6NIE6 340 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 TISP43B9A030 160 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 K7ERI5 159 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 HAS3O00219 553 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 ZNF500O60304 480 aaPredicted RBP15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 TPM1P09493 284 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 GARTP22102 1010 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 CNGA1P29973 690 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 EFNA5P52803 228 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 GJA9P57773 515 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 IGBP1P78318 339 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 POU5F1BQ06416 359 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 LRMPQ12912 555 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 FSCN1Q16658 493 aaKnown RBP15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 ZBTB8OSQ8IWT0 167 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 CBWD1Q9BRT8 395 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 KATNAL1Q9BW62 490 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 C2orf40Q9H1Z8 148 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 HSPBP1Q9NZL4 362 aa15.56■□□□□ 0.08
CYB561A3-216ENST00000540755 AKR1B15C9JRZ8 316 aaPredicted RBP15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 ANKRD63C9JTQ0 380 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 HNRNPDLO14979 420 aaKnown RBP15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 KPNA6O60684 536 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 GYPCP04921 128 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 TMOD1P28289 359 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 ADSSP30520 456 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 CLCN3P51790 818 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 MCCD1P59942 119 aaPredicted RBP15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 RBL2Q08999 1139 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 KCNH2Q12809 1159 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 MFSD10Q14728 455 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 SYCP1Q15431 976 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 KIAA0753Q2KHM9 967 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 FIGNQ5HY92 759 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 SLC39A4Q6P5W5 647 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 RHPN2Q8IUC4 686 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 METTL13Q8N6R0 699 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 TC2NQ8N9U0 490 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 CCDC112Q8NEF3 446 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 SLC35C1Q96A29 364 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 NFKBIZQ9BYH8 718 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 SIK3Q9Y2K2 1263 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 STYXL1Q9Y6J8 313 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 COL6A3P12111 3177 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 NRCAMQ92823 1304 aa15.55■□□□□ 0.08
CYB561A3-216ENST00000540755 KIAA0391O15091 583 aaKnown RBP15.54■□□□□ 0.08
CYB561A3-216ENST00000540755 NRDCO43847 1150 aa15.54■□□□□ 0.08
CYB561A3-216ENST00000540755 AFPP02771 609 aaKnown RBP15.54■□□□□ 0.08
CYB561A3-216ENST00000540755 SYN1P17600 705 aa15.54■□□□□ 0.08
CYB561A3-216ENST00000540755 PSEN2P49810 448 aa15.54■□□□□ 0.08
CYB561A3-216ENST00000540755 LIG4P49917 911 aa15.54■□□□□ 0.08
CYB561A3-216ENST00000540755 CCZ1BP86790 482 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms