RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 CHD4Q14839 1912 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 ASTN1O14525 1302 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 CLDN3O15551 220 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 GTF2A1P52655 376 aaPredicted RBP10.64□□□□□ -0.71
PHC1-208ENST00000540574 GPC5P78333 572 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 KIAA1755Q5JYT7 1200 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 B4GALNT4Q76KP1 1039 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 PALB2Q86YC2 1186 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 PPM1EQ8WY54 764 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 PLCD4Q9BRC7 762 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 FEM1BQ9UK73 627 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.64□□□□□ -0.71
PHC1-208ENST00000540574 ROBO3Q96MS0 1386 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 INO80B-WBP1J3KQ70 363 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 TBX3O15119 743 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 COMTP21964 271 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 POLD1P28340 1107 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 ERVK-9P63128 1117 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 HDLBPQ00341 1268 aaKnown RBP10.64□□□□□ -0.71
PHC1-208ENST00000540574 SNRNP35Q16560 246 aaKnown RBP10.64□□□□□ -0.71
PHC1-208ENST00000540574 MUM1L1Q5H9M0 696 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 MEI1Q5TIA1 1274 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 CCDC137Q6PK04 289 aaKnown RBP10.64□□□□□ -0.71
PHC1-208ENST00000540574 HOOK3Q86VS8 718 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 ACSF2Q96CM8 615 aaPredicted RBP10.64□□□□□ -0.71
PHC1-208ENST00000540574 C18orf8Q96DM3 657 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 INO80BQ9C086 356 aaPredicted RBP10.64□□□□□ -0.71
PHC1-208ENST00000540574 TUFT1Q9NNX1 390 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 C4AP0C0L4 1744 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 C4BP0C0L5 1744 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 WDR64B1ANS9 1081 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 F8VZ95 297 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 K7ERI5 159 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 PIK3R2O00459 728 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 MMEP08473 750 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 BRDTQ58F21 947 aaPredicted RBP10.63□□□□□ -0.71
PHC1-208ENST00000540574 FBXW10Q5XX13 1052 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 SLC47A2Q86VL8 602 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 ARHGEF19Q8IW93 802 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 ATG4AQ8WYN0 398 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 NLRP4Q96MN2 994 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 SAMD15Q9P1V8 674 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 COL14A1Q05707 1796 aaKnown RBP10.63□□□□□ -0.71
PHC1-208ENST00000540574 GOLGA8MH3BSY2 632 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 TGFB1I1O43294 461 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 HMGB2P26583 209 aaKnown RBP10.63□□□□□ -0.71
PHC1-208ENST00000540574 HSD17B3P37058 310 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 CAP2P40123 477 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 SEMA3FQ13275 785 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 SPOPLQ6IQ16 392 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 C15orf52Q6ZUT6 534 aaKnown RBP10.63□□□□□ -0.71
PHC1-208ENST00000540574 SLC7A3Q8WY07 619 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 VPS37BQ9H9H4 285 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 TRPC6Q9Y210 931 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 TMX2Q9Y320 296 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 YDJCA8MPS7 323 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 PHF20L1A8MW92 1017 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 KRT15P19012 456 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 CNGA1P29973 690 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 GBP2P32456 591 aaPredicted RBP10.63□□□□□ -0.71
PHC1-208ENST00000540574 CDK17Q00537 523 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 MTMR3Q13615 1198 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 GNPTABQ3T906 1256 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 C10orf76Q5T2E6 689 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 ATP6V0A1Q93050 837 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 GMCL1Q96IK5 515 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 POLR3CQ9BUI4 534 aaPredicted RBP10.63□□□□□ -0.71
PHC1-208ENST00000540574 GANQ9H2C0 597 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 DBR1Q9UK59 544 aaKnown RBP10.63□□□□□ -0.71
PHC1-208ENST00000540574 PNMA2Q9UL42 364 aa10.63□□□□□ -0.71
PHC1-208ENST00000540574 ATP9AO75110 1047 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 ITGB5P18084 799 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 MARCKSL1P49006 195 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 CXCL9Q07325 125 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 SMAD1Q15797 465 aaKnown RBP10.62□□□□□ -0.71
PHC1-208ENST00000540574 GLE1Q53GS7 698 aaKnown RBP10.62□□□□□ -0.71
PHC1-208ENST00000540574 NBPF12Q5TAG4 269 aaPredicted RBP10.62□□□□□ -0.71
PHC1-208ENST00000540574 LLGL2Q6P1M3 1020 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 KRT35Q92764 455 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 ATP6V1G3Q96LB4 118 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 IWS1Q96ST2 819 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 AZI2Q9H6S1 392 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 INTS9Q9NV88 658 aaKnown RBP10.62□□□□□ -0.71
PHC1-208ENST00000540574 MYO3BQ8WXR4 1341 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 PPP3CAQ08209 521 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 TKFCQ3LXA3 575 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 LIN9Q5TKA1 542 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 ARHGAP27Q6ZUM4 889 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 IRF2BP2Q7Z5L9 587 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 SIAH1Q8IUQ4 282 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 MICALL2Q8IY33 904 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 RTKN2Q8IZC4 609 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 NEK9Q8TD19 979 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 TAS1R2Q8TE23 839 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 IDI2Q9BXS1 227 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 VIPAS39Q9H9C1 493 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 FAM114A2Q9NRY5 505 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 AIPL1Q9NZN9 384 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 BAIAP2L1Q9UHR4 511 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 FEZ2Q9UHY8 353 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms