RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 PTPRZ1P23471 2315 aaPredicted RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 GRIN2DO15399 1336 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 FLT1P17948 1338 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 MCM3APO60318 1980 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 MED19A0JLT2 244 aaPredicted RBP4.77□□□□□ -1.65
C2CD3-214ENST00000540057 LCHNA4D1U4 455 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 PROB1E7EW31 1015 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 H3BQ06 376 aaPredicted RBP4.77□□□□□ -1.65
C2CD3-214ENST00000540057 CTAGE5O15320 804 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 B4GALT4O60513 344 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 DNAJA2O60884 412 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 LRRN2O75325 713 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 SNAI1O95863 264 aaPredicted RBP4.77□□□□□ -1.65
C2CD3-214ENST00000540057 PF4P02776 101 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 PFKMP08237 780 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 C1QTNF9P0C862 333 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 RAP1GAPP47736 663 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 HK2P52789 917 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 GJA9P57773 515 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 GSTO1P78417 241 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 CAMK2GQ13555 558 aaPredicted RBP4.77□□□□□ -1.65
C2CD3-214ENST00000540057 PLS1Q14651 629 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 RAB3GAP1Q15042 981 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 TATDN1Q6P1N9 297 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 LCNL1Q6ZST4 164 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 DEFB128Q7Z7B8 93 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 TSPYL5Q86VY4 417 aaPredicted RBP4.77□□□□□ -1.65
C2CD3-214ENST00000540057 HERC6Q8IVU3 1022 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 ADHFE1Q8IWW8 467 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 SLFN12Q8IYM2 578 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 FBXO15Q8NCQ5 510 aaPredicted RBP4.77□□□□□ -1.65
C2CD3-214ENST00000540057 ABHD4Q8TB40 342 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 TGFBRAP1Q8WUH2 860 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 RNF141Q8WVD5 230 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 GATAD2BQ8WXI9 593 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 EDAQ92838 391 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 ATOH1Q92858 354 aaPredicted RBP4.77□□□□□ -1.65
C2CD3-214ENST00000540057 ATG4CQ96DT6 458 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 MMP19Q99542 508 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 UPF3BQ9BZI7 483 aaKnown RBP4.77□□□□□ -1.65
C2CD3-214ENST00000540057 TRPV6Q9H1D0 765 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 NSUN3Q9H649 340 aaKnown RBP4.77□□□□□ -1.65
C2CD3-214ENST00000540057 REV1Q9UBZ9 1251 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 PRKAG3Q9UGI9 489 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 ZHX1Q9UKY1 873 aaPredicted RBP4.77□□□□□ -1.65
C2CD3-214ENST00000540057 CNPY2Q9Y2B0 182 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 MYH1P12882 1939 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 SPTBN4Q9H254 2564 aa4.77□□□□□ -1.65
C2CD3-214ENST00000540057 SIP14410 1827 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 TET1Q8NFU7 2136 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 A0A1W2PRG0 241 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 PRR23AA6NEV1 266 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 TMEM221A6NGB7 291 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 KIF28PB7ZC32 967 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 M0R296 226 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 CIAO1O76071 339 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 SLC25A27O95847 323 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 HLA-DOAP06340 250 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 ZGLP1P0C6A0 271 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 ACTN1P12814 892 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 GARTP22102 1010 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 GUCY1A2P33402 732 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 TRHRP34981 398 aaPredicted RBP4.76□□□□□ -1.65
C2CD3-214ENST00000540057 VCPP55072 806 aaKnown RBP4.76□□□□□ -1.65
C2CD3-214ENST00000540057 TIMM10P62072 90 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 NKX3-2P78367 333 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 BEX3Q00994 111 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 ITGA7Q13683 1181 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 KCTD2Q14681 263 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 TMEM132BQ14DG7 1078 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 KIAA1755Q5JYT7 1200 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 CXCL17Q6UXB2 119 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 SUGP1Q8IWZ8 645 aaKnown RBP4.76□□□□□ -1.65
C2CD3-214ENST00000540057 MSL3Q8N5Y2 521 aaKnown RBP4.76□□□□□ -1.65
C2CD3-214ENST00000540057 MB21D1Q8N884 522 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 TMEM74Q96NL1 305 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 TANGO6Q9C0B7 1094 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 RNF32Q9H0A6 362 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 SIL1Q9H173 461 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 IRF2BPLQ9H1B7 796 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 SPC25Q9HBM1 224 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 AATFQ9NY61 560 aaKnown RBP eCLIP4.76□□□□□ -1.65
C2CD3-214ENST00000540057 RAI14Q9P0K7 980 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 HMG20BQ9P0W2 317 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 SAP30BPQ9UHR5 308 aaKnown RBP4.76□□□□□ -1.65
C2CD3-214ENST00000540057 DUSP13Q9UII6 198 aa4.76□□□□□ -1.65
C2CD3-214ENST00000540057 ASTN1O14525 1302 aa4.75□□□□□ -1.65
C2CD3-214ENST00000540057 SHISA3A0PJX4 238 aa4.75□□□□□ -1.65
C2CD3-214ENST00000540057 H0Y858 1186 aa4.75□□□□□ -1.65
C2CD3-214ENST00000540057 HTR3BO95264 441 aa4.75□□□□□ -1.65
C2CD3-214ENST00000540057 BPNT1O95861 308 aa4.75□□□□□ -1.65
C2CD3-214ENST00000540057 CYP2C9P11712 490 aa4.75□□□□□ -1.65
C2CD3-214ENST00000540057 RAC2P15153 192 aa4.75□□□□□ -1.65
C2CD3-214ENST00000540057 YARSP54577 528 aaKnown RBP4.75□□□□□ -1.65
C2CD3-214ENST00000540057 ERVK-21P61565 698 aa4.75□□□□□ -1.65
C2CD3-214ENST00000540057 EGR3Q06889 387 aa4.75□□□□□ -1.65
C2CD3-214ENST00000540057 ACVR2BQ13705 512 aa4.75□□□□□ -1.65
C2CD3-214ENST00000540057 SEPT2Q15019 361 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms