RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 ARHGDIAP52565 204 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 KCNH2Q12809 1159 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 GPD1LQ8N335 351 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 USP33Q8TEY7 942 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 RMDN1Q96DB5 314 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 CYTH2Q99418 400 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 RGL1Q9NZL6 768 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 RASGRF2O14827 1237 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 RGS7P49802 495 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 THEMIS2Q5TEJ8 643 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 PPP4R3CPQ6ZMV5 832 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 PDCD7Q8N8D1 485 aaKnown RBP11.93□□□□□ -0.5
LINC00346-201ENST00000538077 ZNF564Q8TBZ8 553 aaPredicted RBP11.93□□□□□ -0.5
LINC00346-201ENST00000538077 CCHCR1Q8TD31 782 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 ACAP3Q96P50 834 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 PPP1R9AQ9ULJ8 1098 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 SUFUQ9UMX1 484 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 SNX24Q9Y343 169 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 ZC3H4Q9UPT8 1303 aaKnown RBP11.93□□□□□ -0.5
LINC00346-201ENST00000538077 A0A0G2JND7 137 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 TBCCQ15814 346 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 WDR48Q8TAF3 677 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 TBC1D16Q8TBP0 767 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 JPH1Q9HDC5 661 aaPredicted RBP11.93□□□□□ -0.5
LINC00346-201ENST00000538077 CTNND1O60716 968 aaKnown RBP11.93□□□□□ -0.5
LINC00346-201ENST00000538077 PDGFRBP09619 1106 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 SNCBQ16143 134 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 CCDC157Q569K6 752 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 PPP1R2P3Q6NXS1 205 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 TRIM42Q8IWZ5 723 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 FMO2Q99518 471 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 FARP1Q9Y4F1 1045 aaPredicted RBP11.93□□□□□ -0.5
LINC00346-201ENST00000538077 TFRCP02786 760 aaKnown RBP11.93□□□□□ -0.5
LINC00346-201ENST00000538077 GUCY1A2P33402 732 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 PAPOLAP51003 745 aaKnown RBP11.93□□□□□ -0.5
LINC00346-201ENST00000538077 C2orf40Q9H1Z8 148 aa11.93□□□□□ -0.5
LINC00346-201ENST00000538077 PRKCBP05771 671 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 NMT1P30419 496 aaKnown RBP11.92□□□□□ -0.5
LINC00346-201ENST00000538077 KNOP1Q1ED39 458 aaKnown RBP11.92□□□□□ -0.5
LINC00346-201ENST00000538077 SMYD3Q9H7B4 428 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 BARHL2Q9NY43 387 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 FBXL5Q9UKA1 691 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 SDC4P31431 198 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 ARL6IP4Q66PJ3 421 aaKnown RBP11.92□□□□□ -0.5
LINC00346-201ENST00000538077 BZW1Q7L1Q6 419 aaKnown RBP11.92□□□□□ -0.5
LINC00346-201ENST00000538077 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00346-201ENST00000538077 CCDC138Q96M89 665 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
LINC00346-201ENST00000538077 AGO2Q9UKV8 859 aaKnown RBP11.92□□□□□ -0.5
LINC00346-201ENST00000538077 PLAAQ9Y263 795 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 CRB1P82279 1406 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 ASB14A6NK59 587 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 RARBP10826 455 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 RALAP11233 206 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 SFNP31947 248 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 ZFYVE28Q9HCC9 887 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 NRKQ7Z2Y5 1582 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 F8W8V4 182 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 ATP9BO43861 1147 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 ACOT2P49753 483 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 GPC5P78333 572 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 ZC3H18Q86VM9 953 aaKnown RBP11.92□□□□□ -0.5
LINC00346-201ENST00000538077 TMEM35BQ8NCS4 154 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 RFWD2Q8NHY2 731 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 ENOX1Q8TC92 643 aaKnown RBP11.92□□□□□ -0.5
LINC00346-201ENST00000538077 GPBP1L1Q9HC44 474 aaPredicted RBP11.92□□□□□ -0.5
LINC00346-201ENST00000538077 CEP72Q9P209 647 aa11.92□□□□□ -0.5
LINC00346-201ENST00000538077 NFKBIAP25963 317 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 VEPH1Q14D04 833 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 E2F5Q15329 346 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 GLE1Q53GS7 698 aaKnown RBP11.91□□□□□ -0.5
LINC00346-201ENST00000538077 EFHC2Q5JST6 749 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 SAMD7Q7Z3H4 446 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 TRAIPQ9BWF2 469 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 CASS4Q9NQ75 786 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 RCOR1Q9UKL0 485 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 EMSYQ7Z589 1322 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 SPAG7O75391 227 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 TMPRSS15P98073 1019 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 ROR1Q01973 937 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 DRAP1Q14919 205 aaPredicted RBP11.91□□□□□ -0.5
LINC00346-201ENST00000538077 ATG16L1Q676U5 607 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 CCNYL1Q8N7R7 359 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 SLC13A1Q9BZW2 595 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 HPS4Q9NQG7 708 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 TJP2Q9UDY2 1190 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 E2F8A0AVK6 867 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 GSG1L2A8MUP6 293 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 KIF28PB7ZC32 967 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 COPEO14579 308 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 MAP3K7O43318 606 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 MFAP3LO75121 409 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 SNAPC2Q13487 334 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 EZH2Q15910 746 aaKnown RBP11.91□□□□□ -0.5
LINC00346-201ENST00000538077 PDIK1LQ8N165 341 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 BHMTQ93088 406 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 ZBTB18Q99592 522 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 ZNRF3Q9ULT6 936 aa11.91□□□□□ -0.5
LINC00346-201ENST00000538077 CALB1P05937 261 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms