RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 STYK1Q6J9G0 422 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 CGB2Q6NT52 195 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 KLHL35Q6PF15 583 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 PACS1Q6VY07 963 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 ASRGL1Q7L266 308 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 CPNE9Q8IYJ1 553 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 SDR16C5Q8N3Y7 309 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 SHKBP1Q8TBC3 707 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 WDR66Q8TBY9 1149 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 EPS8L3Q8TE67 593 aaKnown RBP4.01□□□□□ -1.77
MCF2-210ENST00000536274 U2AF1L4Q8WU68 220 aaKnown RBP4.01□□□□□ -1.77
MCF2-210ENST00000536274 JDP2Q8WYK2 163 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 LPIN2Q92539 896 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 PBKQ96KB5 322 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 TRAPPC9Q96Q05 1148 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 MAP3K14Q99558 947 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 HEPHQ9BQS7 1158 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 CCSER1Q9C0I3 900 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 KIAA1683Q9H0B3 1180 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 MYLK2Q9H1R3 596 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 DHX36Q9H2U1 1008 aaKnown RBP4.01□□□□□ -1.77
MCF2-210ENST00000536274 VPS51Q9UID3 782 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 PCDHGB4Q9UN71 923 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 ZNF148Q9UQR1 794 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 PCDHGB5Q9Y5G0 923 aa4.01□□□□□ -1.77
MCF2-210ENST00000536274 E7EWF7 191 aa4□□□□□ -1.77
MCF2-210ENST00000536274 CAPN9O14815 690 aa4□□□□□ -1.77
MCF2-210ENST00000536274 RNASEH1O60930 286 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 ADAM23O75077 832 aa4□□□□□ -1.77
MCF2-210ENST00000536274 ZBTB11O95625 1053 aaPredicted RBP4□□□□□ -1.77
MCF2-210ENST00000536274 CDK4P11802 303 aa4□□□□□ -1.77
MCF2-210ENST00000536274 EEF2P13639 858 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 ACADSP16219 412 aa4□□□□□ -1.77
MCF2-210ENST00000536274 DNAJB2P25686 324 aa4□□□□□ -1.77
MCF2-210ENST00000536274 NAA20P61599 178 aa4□□□□□ -1.77
MCF2-210ENST00000536274 NR5A1Q13285 461 aa4□□□□□ -1.77
MCF2-210ENST00000536274 LIN52Q52LA3 116 aa4□□□□□ -1.77
MCF2-210ENST00000536274 DALRD3Q5D0E6 543 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 TRAPPC3LQ5T215 181 aa4□□□□□ -1.77
MCF2-210ENST00000536274 CDKAL1Q5VV42 579 aa4□□□□□ -1.77
MCF2-210ENST00000536274 SPTY2D1Q68D10 685 aaPredicted RBP4□□□□□ -1.77
MCF2-210ENST00000536274 KRT40Q6A162 431 aa4□□□□□ -1.77
MCF2-210ENST00000536274 IRGCQ6NXR0 463 aa4□□□□□ -1.77
MCF2-210ENST00000536274 ANO5Q75V66 913 aa4□□□□□ -1.77
MCF2-210ENST00000536274 DHX32Q7L7V1 743 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 SESTD1Q86VW0 696 aa4□□□□□ -1.77
MCF2-210ENST00000536274 ECHDC2Q86YB7 292 aa4□□□□□ -1.77
MCF2-210ENST00000536274 CD302Q8IX05 232 aa4□□□□□ -1.77
MCF2-210ENST00000536274 RBBP8NLQ8NC74 664 aaPredicted RBP4□□□□□ -1.77
MCF2-210ENST00000536274 NAT14Q8WUY8 206 aa4□□□□□ -1.77
MCF2-210ENST00000536274 PIGBQ92521 554 aa4□□□□□ -1.77
MCF2-210ENST00000536274 GATA6Q92908 595 aa4□□□□□ -1.77
MCF2-210ENST00000536274 ZNF653Q96CK0 615 aa4□□□□□ -1.77
MCF2-210ENST00000536274 RPGRIP1Q96KN7 1286 aa4□□□□□ -1.77
MCF2-210ENST00000536274 GPR101Q96P66 508 aaPredicted RBP4□□□□□ -1.77
MCF2-210ENST00000536274 PPP1R10Q96QC0 940 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 PLIN2Q99541 437 aa4□□□□□ -1.77
MCF2-210ENST00000536274 TBC1D10AQ9BXI6 508 aa4□□□□□ -1.77
MCF2-210ENST00000536274 STK33Q9BYT3 514 aa4□□□□□ -1.77
MCF2-210ENST00000536274 CSRNP2Q9H175 543 aa4□□□□□ -1.77
MCF2-210ENST00000536274 ATAD3AQ9NVI7 634 aa4□□□□□ -1.77
MCF2-210ENST00000536274 SWAP70Q9UH65 585 aa4□□□□□ -1.77
MCF2-210ENST00000536274 AMACRQ9UHK6 382 aa4□□□□□ -1.77
MCF2-210ENST00000536274 PCDHB6Q9Y5E3 794 aa4□□□□□ -1.77
MCF2-210ENST00000536274 NUMBLQ9Y6R0 609 aa4□□□□□ -1.77
MCF2-210ENST00000536274 CEMIPQ8WUJ3 1361 aa4□□□□□ -1.77
MCF2-210ENST00000536274 AOX1Q06278 1338 aa4□□□□□ -1.77
MCF2-210ENST00000536274 hCG_1642624A0A1W2PR95 340 aa4□□□□□ -1.77
MCF2-210ENST00000536274 KLRG2A4D1S0 409 aaPredicted RBP4□□□□□ -1.77
MCF2-210ENST00000536274 BTBD18B2RXH4 712 aa4□□□□□ -1.77
MCF2-210ENST00000536274 WNT7AO00755 349 aa4□□□□□ -1.77
MCF2-210ENST00000536274 CPLX1O14810 134 aa4□□□□□ -1.77
MCF2-210ENST00000536274 TBX10O75333 385 aa4□□□□□ -1.77
MCF2-210ENST00000536274 STAMBPO95630 424 aa4□□□□□ -1.77
MCF2-210ENST00000536274 ASMTLO95671 621 aa4□□□□□ -1.77
MCF2-210ENST00000536274 MYCP01106 439 aaPredicted RBP4□□□□□ -1.77
MCF2-210ENST00000536274 GSTA1P08263 222 aa4□□□□□ -1.77
MCF2-210ENST00000536274 TRIM21P19474 475 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 GUCY1A2P33402 732 aa4□□□□□ -1.77
MCF2-210ENST00000536274 HSPA9P38646 679 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 STT3AP46977 705 aa4□□□□□ -1.77
MCF2-210ENST00000536274 KCNMA1Q12791 1236 aa4□□□□□ -1.77
MCF2-210ENST00000536274 KPNB1Q14974 876 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 LLGL1Q15334 1064 aa4□□□□□ -1.77
MCF2-210ENST00000536274 CLUL1Q15846 466 aa4□□□□□ -1.77
MCF2-210ENST00000536274 FXNQ16595 210 aa4□□□□□ -1.77
MCF2-210ENST00000536274 CWF19L2Q2TBE0 894 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 PROX2Q3B8N5 592 aa4□□□□□ -1.77
MCF2-210ENST00000536274 ZNF394Q53GI3 561 aa4□□□□□ -1.77
MCF2-210ENST00000536274 KLHDC7AQ5VTJ3 777 aa4□□□□□ -1.77
MCF2-210ENST00000536274 FAAH2Q6GMR7 532 aa4□□□□□ -1.77
MCF2-210ENST00000536274 DTX3Q8N9I9 347 aa4□□□□□ -1.77
MCF2-210ENST00000536274 TTC13Q8NBP0 860 aa4□□□□□ -1.77
MCF2-210ENST00000536274 LRRC8CQ8TDW0 803 aa4□□□□□ -1.77
MCF2-210ENST00000536274 USP6NLQ92738 828 aa4□□□□□ -1.77
MCF2-210ENST00000536274 ARHGEF2Q92974 986 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 ERP27Q96DN0 273 aa4□□□□□ -1.77
MCF2-210ENST00000536274 ALG1Q9BT22 464 aa4□□□□□ -1.77
MCF2-210ENST00000536274 IFIH1Q9BYX4 1025 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 CEP44Q9C0F1 390 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms